RNA–Protein interactions for RNA: ENST00000414636.1

PMM1-202, Transcript of phosphomannomutase 1, humanhuman

TSL 5

Gene PMM1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-202ENST00000414636 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
PMM1-202ENST00000414636 CCDC180Q9P1Z9 1646 aa30.33■■■□□ 2.45
PMM1-202ENST00000414636 ABCC9O60706 1549 aa30.13■■■□□ 2.41
PMM1-202ENST00000414636 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
PMM1-202ENST00000414636 NACADO15069 1562 aa28.61■■■□□ 2.17
PMM1-202ENST00000414636 DCAF8L2P0C7V8 631 aa28.6■■■□□ 2.17
PMM1-202ENST00000414636 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
PMM1-202ENST00000414636 UNC13AQ9UPW8 1703 aa28.15■■■□□ 2.1
PMM1-202ENST00000414636 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
PMM1-202ENST00000414636 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.09
PMM1-202ENST00000414636 DNAJC5BQ9UF47 199 aa28■■■□□ 2.07
PMM1-202ENST00000414636 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
PMM1-202ENST00000414636 BICRAQ9NZM4 1560 aa27.87■■■□□ 2.05
PMM1-202ENST00000414636 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
PMM1-202ENST00000414636 SHROOM4Q9ULL8 1493 aa27.52■■■□□ 2
PMM1-202ENST00000414636 CC2D2AQ9P2K1 1620 aa27.23■■□□□ 1.95
PMM1-202ENST00000414636 EIF4G1Q04637 1599 aaKnown RBP27.2■■□□□ 1.94
PMM1-202ENST00000414636 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
PMM1-202ENST00000414636 SMARCA4P51532 1647 aa26.39■■□□□ 1.82
PMM1-202ENST00000414636 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
PMM1-202ENST00000414636 ATAD2BQ9ULI0 1458 aa26.33■■□□□ 1.81
PMM1-202ENST00000414636 SMARCA2P51531 1590 aa26.32■■□□□ 1.8
PMM1-202ENST00000414636 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
PMM1-202ENST00000414636 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
PMM1-202ENST00000414636 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.78
PMM1-202ENST00000414636 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
PMM1-202ENST00000414636 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
PMM1-202ENST00000414636 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
PMM1-202ENST00000414636 NESP48681 1621 aa25.92■■□□□ 1.74
PMM1-202ENST00000414636 CUX2O14529 1486 aa25.86■■□□□ 1.73
PMM1-202ENST00000414636 WIZO95785 1651 aa25.83■■□□□ 1.73
PMM1-202ENST00000414636 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
PMM1-202ENST00000414636 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
PMM1-202ENST00000414636 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.69
PMM1-202ENST00000414636 THOC2Q8NI27 1593 aaKnown RBP25.62■■□□□ 1.69
PMM1-202ENST00000414636 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
PMM1-202ENST00000414636 CADPSQ9ULU8 1353 aa25.6■■□□□ 1.69
PMM1-202ENST00000414636 DNAJC5Q9H3Z4 198 aa25.59■■□□□ 1.69
PMM1-202ENST00000414636 TOP2AP11388 1531 aaKnown RBP25.5■■□□□ 1.67
PMM1-202ENST00000414636 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
PMM1-202ENST00000414636 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
PMM1-202ENST00000414636 CFTRP13569 1480 aa25.34■■□□□ 1.65
PMM1-202ENST00000414636 FANCD2Q9BXW9 1451 aa25.33■■□□□ 1.65
PMM1-202ENST00000414636 WDR62O43379 1518 aa25.31■■□□□ 1.64
PMM1-202ENST00000414636 PRDM2Q13029 1718 aa25.2■■□□□ 1.63
PMM1-202ENST00000414636 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
PMM1-202ENST00000414636 URB2Q14146 1524 aaKnown RBP25.08■■□□□ 1.61
PMM1-202ENST00000414636 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
PMM1-202ENST00000414636 ABCC8Q09428 1581 aa24.85■■□□□ 1.57
PMM1-202ENST00000414636 IFT140Q96RY7 1462 aa24.83■■□□□ 1.56
PMM1-202ENST00000414636 DNMBPQ6XZF7 1577 aa24.81■■□□□ 1.56
PMM1-202ENST00000414636 ZNF608Q9ULD9 1512 aaPredicted RBP24.75■■□□□ 1.55
PMM1-202ENST00000414636 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
PMM1-202ENST00000414636 OSCARQ8IYS5 282 aa24.74■■□□□ 1.55
PMM1-202ENST00000414636 EIF4G3O43432 1585 aaKnown RBP24.66■■□□□ 1.54
PMM1-202ENST00000414636 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
PMM1-202ENST00000414636 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
PMM1-202ENST00000414636 POLA1P09884 1462 aaPredicted RBP24.62■■□□□ 1.53
PMM1-202ENST00000414636 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.521e-7■■■■■ 37.4
PMM1-202ENST00000414636 SOGA1O94964 1423 aa24.54■■□□□ 1.52
PMM1-202ENST00000414636 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
PMM1-202ENST00000414636 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
PMM1-202ENST00000414636 CUX1P39880 1505 aa24.51■■□□□ 1.51
PMM1-202ENST00000414636 CHD1O14646 1710 aa24.47■■□□□ 1.51
PMM1-202ENST00000414636 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
PMM1-202ENST00000414636 FBLN2P98095 1184 aa24.43■■□□□ 1.5
PMM1-202ENST00000414636 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
PMM1-202ENST00000414636 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
PMM1-202ENST00000414636 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
PMM1-202ENST00000414636 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
PMM1-202ENST00000414636 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.49
PMM1-202ENST00000414636 ARHGEF11O15085 1522 aa24.32■■□□□ 1.48
PMM1-202ENST00000414636 GRIN2BQ13224 1484 aa24.3■■□□□ 1.48
PMM1-202ENST00000414636 MAGI1Q96QZ7 1491 aaPredicted RBP24.27■■□□□ 1.48
PMM1-202ENST00000414636 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
PMM1-202ENST00000414636 CHMP7Q8WUX9 453 aaPredicted RBP24.26■■□□□ 1.47
PMM1-202ENST00000414636 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
PMM1-202ENST00000414636 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
PMM1-202ENST00000414636 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
PMM1-202ENST00000414636 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.469e-6■■■■■ 50.1
PMM1-202ENST00000414636 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
PMM1-202ENST00000414636 ABCA5Q8WWZ7 1642 aa24.19■■□□□ 1.46
PMM1-202ENST00000414636 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
PMM1-202ENST00000414636 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
PMM1-202ENST00000414636 CYB5RLQ6IPT4 315 aa24.16■■□□□ 1.46
PMM1-202ENST00000414636 CLASP1Q7Z460 1538 aa24.12■■□□□ 1.45
PMM1-202ENST00000414636 ARAP1Q96P48 1450 aa24.08■■□□□ 1.45
PMM1-202ENST00000414636 ADAMTS12P58397 1594 aa24■■□□□ 1.43
PMM1-202ENST00000414636 GRIN2AQ12879 1464 aa23.98■■□□□ 1.43
PMM1-202ENST00000414636 ERICH3Q5RHP9 1530 aa23.94■■□□□ 1.42
PMM1-202ENST00000414636 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
PMM1-202ENST00000414636 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
PMM1-202ENST00000414636 TRHP20396 242 aaPredicted RBP23.88■■□□□ 1.41
PMM1-202ENST00000414636 NUP160Q12769 1436 aa23.85■■□□□ 1.41
PMM1-202ENST00000414636 ERCC6L2Q5T890 1561 aa23.77■■□□□ 1.4
PMM1-202ENST00000414636 SHROOM2Q13796 1616 aa23.75■■□□□ 1.39
PMM1-202ENST00000414636 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
PMM1-202ENST00000414636 CUL7Q14999 1698 aa23.68■■□□□ 1.38
PMM1-202ENST00000414636 PRG4Q92954 1404 aaPredicted RBP23.66■■□□□ 1.38
PMM1-202ENST00000414636 IGF1RP08069 1367 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms