RNA–Protein interactions for RNA: ENST00000414362.6

MCF2L2-202, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2 BASIC

Gene MCF2L2, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-202ENST00000414362 AEBP2Q6ZN18 517 aaPredicted RBP12.78□□□□□ -0.36
MCF2L2-202ENST00000414362 CHIC1Q5VXU3 224 aa12.17□□□□□ -0.46
MCF2L2-202ENST00000414362 NISCHQ9Y2I1 1504 aa11.23□□□□□ -0.61
MCF2L2-202ENST00000414362 SENP3Q9H4L4 574 aaPredicted RBP10.97□□□□□ -0.65
MCF2L2-202ENST00000414362 PHF23Q9BUL5 403 aaPredicted RBP10.78□□□□□ -0.68
MCF2L2-202ENST00000414362 PELP1Q8IZL8 1130 aaKnown RBP10.26□□□□□ -0.77
MCF2L2-202ENST00000414362 CCDC180Q9P1Z9 1646 aa10.21□□□□□ -0.78
MCF2L2-202ENST00000414362 MYT1Q01538 1121 aa10.21□□□□□ -0.78
MCF2L2-202ENST00000414362 FOXD1Q16676 465 aa10.17□□□□□ -0.78
MCF2L2-202ENST00000414362 TTBK1Q5TCY1 1321 aaPredicted RBP9.94□□□□□ -0.82
MCF2L2-202ENST00000414362 PLPPR3Q6T4P5 718 aa9.74□□□□□ -0.85
MCF2L2-202ENST00000414362 MSH5O43196 834 aa9.58□□□□□ -0.88
MCF2L2-202ENST00000414362 MYO15BQ96JP2 1530 aa9.58□□□□□ -0.88
MCF2L2-202ENST00000414362 ABCC9O60706 1549 aa9.56□□□□□ -0.88
MCF2L2-202ENST00000414362 NACADO15069 1562 aa9.52□□□□□ -0.89
MCF2L2-202ENST00000414362 PIAS4Q8N2W9 510 aaPredicted RBP9.51□□□□□ -0.89
MCF2L2-202ENST00000414362 DCAF1Q9Y4B6 1507 aa9.5□□□□□ -0.89
MCF2L2-202ENST00000414362 RB1CC1Q8TDY2 1594 aa9.49□□□□□ -0.89
MCF2L2-202ENST00000414362 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
MCF2L2-202ENST00000414362 PPP6R1Q9UPN7 881 aa9.47□□□□□ -0.89
MCF2L2-202ENST00000414362 ADRA2BP18089 450 aa9.45□□□□□ -0.9
MCF2L2-202ENST00000414362 ZCCHC6Q5VYS8 1495 aaKnown RBP9.39□□□□□ -0.91
MCF2L2-202ENST00000414362 HRCP23327 699 aa9.35□□□□□ -0.91
MCF2L2-202ENST00000414362 SHROOM4Q9ULL8 1493 aa9.33□□□□□ -0.92
MCF2L2-202ENST00000414362 POTEDQ86YR6 584 aa9.31□□□□□ -0.92
MCF2L2-202ENST00000414362 APLP2Q06481 763 aa9.26□□□□□ -0.93
MCF2L2-202ENST00000414362 UNC13AQ9UPW8 1703 aa9.22□□□□□ -0.93
MCF2L2-202ENST00000414362 ERICH6Q7L0X2 663 aa9.21□□□□□ -0.93
MCF2L2-202ENST00000414362 PRKCSHP14314 528 aaPredicted RBP9.13□□□□□ -0.95
MCF2L2-202ENST00000414362 BICRAQ9NZM4 1560 aa9.1□□□□□ -0.95
MCF2L2-202ENST00000414362 SCAF1Q9H7N4 1312 aaKnown RBP9.03□□□□□ -0.96
MCF2L2-202ENST00000414362 SCRIBQ14160 1630 aa8.99□□□□□ -0.97
MCF2L2-202ENST00000414362 DCAF8L2P0C7V8 631 aa8.94□□□□□ -0.98
MCF2L2-202ENST00000414362 BCL11AQ9H165 835 aa8.93□□□□□ -0.98
MCF2L2-202ENST00000414362 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
MCF2L2-202ENST00000414362 EIF4G1Q04637 1599 aaKnown RBP8.86□□□□□ -0.99
MCF2L2-202ENST00000414362 DAXXQ9UER7 740 aaPredicted RBP8.85□□□□□ -0.99
MCF2L2-202ENST00000414362 CENPBP07199 599 aaPredicted RBP8.8□□□□□ -1
MCF2L2-202ENST00000414362 CC2D2AQ9P2K1 1620 aa8.8□□□□□ -1
MCF2L2-202ENST00000414362 PABPN1Q86U42 306 aaKnown RBP eCLIP8.79□□□□□ -1
MCF2L2-202ENST00000414362 FAM9AQ8IZU1 332 aaPredicted RBP8.78□□□□□ -1
MCF2L2-202ENST00000414362 PEG3Q9GZU2 1588 aa8.77□□□□□ -1.01
MCF2L2-202ENST00000414362 BAZ1AQ9NRL2 1556 aaPredicted RBP8.77□□□□□ -1.01
MCF2L2-202ENST00000414362 ZEB1P37275 1124 aaPredicted RBP8.75□□□□□ -1.01
MCF2L2-202ENST00000414362 SMARCA2P51531 1590 aa8.75□□□□□ -1.01
MCF2L2-202ENST00000414362 HMGXB3Q12766 1538 aa8.74□□□□□ -1.01
MCF2L2-202ENST00000414362 SMARCA4P51532 1647 aa8.74□□□□□ -1.01
MCF2L2-202ENST00000414362 ACIN1Q9UKV3 1341 aaKnown RBP8.74□□□□□ -1.01
MCF2L2-202ENST00000414362 NCAPD3P42695 1498 aa8.7□□□□□ -1.02
MCF2L2-202ENST00000414362 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
MCF2L2-202ENST00000414362 DMRT2Q9Y5R5 561 aa8.69□□□□□ -1.02
MCF2L2-202ENST00000414362 MAPK8IP2Q13387 824 aaPredicted RBP8.66□□□□□ -1.02
MCF2L2-202ENST00000414362 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
MCF2L2-202ENST00000414362 ANP32EQ9BTT0 268 aa8.64□□□□□ -1.03
MCF2L2-202ENST00000414362 ATAD2BQ9ULI0 1458 aa8.63□□□□□ -1.03
MCF2L2-202ENST00000414362 DNAJC5BQ9UF47 199 aa8.63□□□□□ -1.03
MCF2L2-202ENST00000414362 RTN4Q9NQC3 1192 aaKnown RBP8.59□□□□□ -1.04
MCF2L2-202ENST00000414362 BAZ1BQ9UIG0 1483 aaKnown RBP8.56□□□□□ -1.04
MCF2L2-202ENST00000414362 CLSPNQ9HAW4 1339 aa8.56□□□□□ -1.04
MCF2L2-202ENST00000414362 MROH2BQ7Z745 1585 aa8.54□□□□□ -1.04
MCF2L2-202ENST00000414362 LAMC3Q9Y6N6 1575 aa8.53□□□□□ -1.04
MCF2L2-202ENST00000414362 TOP2AP11388 1531 aaKnown RBP8.52□□□□□ -1.05
MCF2L2-202ENST00000414362 UBE2Q2Q8WVN8 375 aa8.51□□□□□ -1.05
MCF2L2-202ENST00000414362 NEUROD1Q13562 356 aa8.51□□□□□ -1.05
MCF2L2-202ENST00000414362 PPP4R3CPQ6ZMV5 832 aa8.51□□□□□ -1.05
MCF2L2-202ENST00000414362 PRDM2Q13029 1718 aa8.5□□□□□ -1.05
MCF2L2-202ENST00000414362 GTF3C3Q9Y5Q9 886 aa8.49□□□□□ -1.05
MCF2L2-202ENST00000414362 NCBP3Q53F19 620 aaKnown RBP8.48□□□□□ -1.05
MCF2L2-202ENST00000414362 WIZO95785 1651 aa8.46□□□□□ -1.06
MCF2L2-202ENST00000414362 RSF1Q96T23 1441 aaPredicted RBP8.46□□□□□ -1.06
MCF2L2-202ENST00000414362 EIF5BO60841 1220 aaKnown RBP8.45□□□□□ -1.06
MCF2L2-202ENST00000414362 PCGF6Q9BYE7 350 aa8.45□□□□□ -1.06
MCF2L2-202ENST00000414362 AMER1Q5JTC6 1135 aaPredicted RBP8.45□□□□□ -1.06
MCF2L2-202ENST00000414362 CUX2O14529 1486 aa8.44□□□□□ -1.06
MCF2L2-202ENST00000414362 MYT1LQ9UL68 1186 aa8.42□□□□□ -1.06
MCF2L2-202ENST00000414362 TRIM26Q12899 539 aaPredicted RBP8.4□□□□□ -1.06
MCF2L2-202ENST00000414362 ERICH6BQ5W0A0 696 aa8.4□□□□□ -1.07
MCF2L2-202ENST00000414362 PDS5BQ9NTI5 1447 aa8.39□□□□□ -1.07
MCF2L2-202ENST00000414362 CNKSR2Q8WXI2 1034 aa8.38□□□□□ -1.07
MCF2L2-202ENST00000414362 HOXD11P31277 338 aaPredicted RBP8.37□□□□□ -1.07
MCF2L2-202ENST00000414362 THOC2Q8NI27 1593 aaKnown RBP8.37□□□□□ -1.07
MCF2L2-202ENST00000414362 CADPSQ9ULU8 1353 aa8.37□□□□□ -1.07
MCF2L2-202ENST00000414362 CFTRP13569 1480 aa8.37□□□□□ -1.07
MCF2L2-202ENST00000414362 CSRNP3Q8WYN3 585 aa8.36□□□□□ -1.07
MCF2L2-202ENST00000414362 KCNA4P22459 653 aa8.33□□□□□ -1.08
MCF2L2-202ENST00000414362 KIF21AQ7Z4S6 1674 aa8.33□□□□□ -1.08
MCF2L2-202ENST00000414362 WDR62O43379 1518 aa8.33□□□□□ -1.08
MCF2L2-202ENST00000414362 ERCC6Q03468 1493 aa8.33□□□□□ -1.08
MCF2L2-202ENST00000414362 ABCC8Q09428 1581 aa8.32□□□□□ -1.08
MCF2L2-202ENST00000414362 RNF216Q9NWF9 866 aaPredicted RBP8.31□□□□□ -1.08
MCF2L2-202ENST00000414362 MRC2Q9UBG0 1479 aa8.31□□□□□ -1.08
MCF2L2-202ENST00000414362 WDR97A6NE52 1622 aa8.3□□□□□ -1.08
MCF2L2-202ENST00000414362 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
MCF2L2-202ENST00000414362 CCDC88BA6NC98 1476 aa8.27□□□□□ -1.08
MCF2L2-202ENST00000414362 DCAF8L1A6NGE4 600 aa8.27□□□□□ -1.09
MCF2L2-202ENST00000414362 FANCD2Q9BXW9 1451 aa8.26□□□□□ -1.09
MCF2L2-202ENST00000414362 NESP48681 1621 aa8.26□□□□□ -1.09
MCF2L2-202ENST00000414362 TSHZ2Q9NRE2 1034 aa8.22□□□□□ -1.09
MCF2L2-202ENST00000414362 DNMBPQ6XZF7 1577 aa8.22□□□□□ -1.09
MCF2L2-202ENST00000414362 SUPT5HO00267 1087 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms