RNA–Protein interactions for RNA: ENST00000414281.5

CAP1-207, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 4

Gene CAP1, Length 772 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-207ENST00000414281 NISCHQ9Y2I1 1504 aa28.25■■■□□ 2.11
CAP1-207ENST00000414281 CCDC180Q9P1Z9 1646 aa25.3■■□□□ 1.64
CAP1-207ENST00000414281 ABCC9O60706 1549 aa25.18■■□□□ 1.62
CAP1-207ENST00000414281 RB1CC1Q8TDY2 1594 aa24.01■■□□□ 1.43
CAP1-207ENST00000414281 NACADO15069 1562 aa23.88■■□□□ 1.41
CAP1-207ENST00000414281 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
CAP1-207ENST00000414281 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
CAP1-207ENST00000414281 DNAJC5BQ9UF47 199 aa23.55■■□□□ 1.36
CAP1-207ENST00000414281 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
CAP1-207ENST00000414281 ZCCHC6Q5VYS8 1495 aaKnown RBP23.45■■□□□ 1.34
CAP1-207ENST00000414281 PABPN1Q86U42 306 aaKnown RBP eCLIP23.45■■□□□ 1.34
CAP1-207ENST00000414281 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
CAP1-207ENST00000414281 DCAF1Q9Y4B6 1507 aa23.33■■□□□ 1.33
CAP1-207ENST00000414281 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
CAP1-207ENST00000414281 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
CAP1-207ENST00000414281 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
CAP1-207ENST00000414281 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
CAP1-207ENST00000414281 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
CAP1-207ENST00000414281 NCAPD3P42695 1498 aa22.04■■□□□ 1.12
CAP1-207ENST00000414281 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
CAP1-207ENST00000414281 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
CAP1-207ENST00000414281 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
CAP1-207ENST00000414281 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
CAP1-207ENST00000414281 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
CAP1-207ENST00000414281 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
CAP1-207ENST00000414281 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
CAP1-207ENST00000414281 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.08
CAP1-207ENST00000414281 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
CAP1-207ENST00000414281 NESP48681 1621 aa21.69■■□□□ 1.06
CAP1-207ENST00000414281 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
CAP1-207ENST00000414281 CUX2O14529 1486 aa21.64■■□□□ 1.05
CAP1-207ENST00000414281 WIZO95785 1651 aa21.53■■□□□ 1.04
CAP1-207ENST00000414281 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
CAP1-207ENST00000414281 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
CAP1-207ENST00000414281 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
CAP1-207ENST00000414281 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
CAP1-207ENST00000414281 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
CAP1-207ENST00000414281 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
CAP1-207ENST00000414281 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
CAP1-207ENST00000414281 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
CAP1-207ENST00000414281 WDR62O43379 1518 aa21.18■□□□□ 0.98
CAP1-207ENST00000414281 CFTRP13569 1480 aa21.17■□□□□ 0.98
CAP1-207ENST00000414281 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
CAP1-207ENST00000414281 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
CAP1-207ENST00000414281 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
CAP1-207ENST00000414281 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
CAP1-207ENST00000414281 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
CAP1-207ENST00000414281 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
CAP1-207ENST00000414281 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
CAP1-207ENST00000414281 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
CAP1-207ENST00000414281 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
CAP1-207ENST00000414281 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
CAP1-207ENST00000414281 OSCARQ8IYS5 282 aa20.64■□□□□ 0.89
CAP1-207ENST00000414281 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
CAP1-207ENST00000414281 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
CAP1-207ENST00000414281 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
CAP1-207ENST00000414281 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
CAP1-207ENST00000414281 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.871e-6■■■■□ 24.9
CAP1-207ENST00000414281 RAD54L2Q9Y4B4 1467 aa20.49■□□□□ 0.87
CAP1-207ENST00000414281 CUX1P39880 1505 aa20.46■□□□□ 0.87
CAP1-207ENST00000414281 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
CAP1-207ENST00000414281 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
CAP1-207ENST00000414281 SOGA1O94964 1423 aa20.44■□□□□ 0.86
CAP1-207ENST00000414281 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
CAP1-207ENST00000414281 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
CAP1-207ENST00000414281 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
CAP1-207ENST00000414281 CHD1O14646 1710 aa20.42■□□□□ 0.86
CAP1-207ENST00000414281 TDRD9Q8NDG6 1382 aaKnown RBP20.39■□□□□ 0.85
CAP1-207ENST00000414281 ARHGEF11O15085 1522 aa20.36■□□□□ 0.85
CAP1-207ENST00000414281 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
CAP1-207ENST00000414281 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
CAP1-207ENST00000414281 FBLN2P98095 1184 aa20.29■□□□□ 0.84
CAP1-207ENST00000414281 GRIN2BQ13224 1484 aa20.25■□□□□ 0.83
CAP1-207ENST00000414281 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
CAP1-207ENST00000414281 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
CAP1-207ENST00000414281 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
CAP1-207ENST00000414281 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
CAP1-207ENST00000414281 CLASP1Q7Z460 1538 aa20.2■□□□□ 0.82
CAP1-207ENST00000414281 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
CAP1-207ENST00000414281 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
CAP1-207ENST00000414281 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
CAP1-207ENST00000414281 BIVM-ERCC5R4GMW8 1640 aa20.17■□□□□ 0.82
CAP1-207ENST00000414281 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
CAP1-207ENST00000414281 CYB5RLQ6IPT4 315 aa20.16■□□□□ 0.82
CAP1-207ENST00000414281 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
CAP1-207ENST00000414281 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
CAP1-207ENST00000414281 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.812e-8■■■□□ 16.7
CAP1-207ENST00000414281 ADAMTS12P58397 1594 aa20.03■□□□□ 0.8
CAP1-207ENST00000414281 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
CAP1-207ENST00000414281 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
CAP1-207ENST00000414281 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
CAP1-207ENST00000414281 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
CAP1-207ENST00000414281 NUP160Q12769 1436 aa19.94■□□□□ 0.78
CAP1-207ENST00000414281 ERCC6L2Q5T890 1561 aa19.91■□□□□ 0.78
CAP1-207ENST00000414281 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
CAP1-207ENST00000414281 SHROOM2Q13796 1616 aa19.86■□□□□ 0.77
CAP1-207ENST00000414281 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
CAP1-207ENST00000414281 IGF1RP08069 1367 aa19.72■□□□□ 0.75
CAP1-207ENST00000414281 KIF27Q86VH2 1401 aa19.72■□□□□ 0.75
CAP1-207ENST00000414281 PRG4Q92954 1404 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms