RNA–Protein interactions for RNA: ENST00000414276.6

APH1A-204, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2 BASIC

Gene APH1A, Length 1,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-204ENST00000414276 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.09■□□□□ 0.011e-15■■■■■ 52.3
APH1A-204ENST00000414276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.23■■□□□ 1.475e-6■■■■■ 46.2
APH1A-204ENST00000414276 METAP2P50579 478 aaKnown RBP eCLIP19.09■□□□□ 0.657e-10■■■■■ 41
APH1A-204ENST00000414276 RPS3P23396 243 aaKnown RBP eCLIP16.23■□□□□ 0.193e-7■■■■■ 39.2
APH1A-204ENST00000414276 EFTUD2Q15029 972 aaKnown RBP eCLIP16.96■□□□□ 0.32e-8■■■■■ 38.4
APH1A-204ENST00000414276 DDX6P26196 483 aaKnown RBP eCLIP16.18■□□□□ 0.184e-20■■■■■ 36
APH1A-204ENST00000414276 UPF1Q92900 1129 aaKnown RBP eCLIP21.41■■□□□ 1.021e-7■■■■■ 31.1
APH1A-204ENST00000414276 DDX3XO00571 662 aaKnown RBP eCLIP17.79■□□□□ 0.447e-10■■■■■ 30.6
APH1A-204ENST00000414276 TIA1P31483 386 aaKnown RBP eCLIP15.79■□□□□ 0.121e-8■■■■■ 29.7
APH1A-204ENST00000414276 AKAP1Q92667 903 aaKnown RBP eCLIP14.71□□□□□ -0.054e-8■■■■■ 27.8
APH1A-204ENST00000414276 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.69■□□□□ 0.429e-6■■■■■ 27.7
APH1A-204ENST00000414276 SUB1P53999 127 aaKnown RBP eCLIP13.24□□□□□ -0.294e-10■■■■□ 26
APH1A-204ENST00000414276 RBFOX2O43251 390 aaKnown RBP eCLIP13.59□□□□□ -0.237e-7■■■■□ 24.4
APH1A-204ENST00000414276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■■□ 24
APH1A-204ENST00000414276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.59■□□□□ 0.253e-6■■■■□ 21.6
APH1A-204ENST00000414276 TIAL1Q01085 375 aaKnown RBP eCLIP16.35■□□□□ 0.211e-7■■■■□ 20.7
APH1A-204ENST00000414276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.93■□□□□ 0.34e-23■■■■□ 20.7
APH1A-204ENST00000414276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.58■■□□□ 1.526e-8■■■■□ 20.3
APH1A-204ENST00000414276 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.74■□□□□ 0.116e-11■■■□□ 18.2
APH1A-204ENST00000414276 ZC3H11AO75152 810 aaKnown RBP eCLIP17.66■□□□□ 0.422e-7■■■□□ 17
APH1A-204ENST00000414276 LARP4Q71RC2 724 aaKnown RBP eCLIP16.29■□□□□ 0.26e-7■■■□□ 16.7
APH1A-204ENST00000414276 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.512e-8■■■□□ 15.9
APH1A-204ENST00000414276 PCBP1Q15365 356 aaKnown RBP eCLIP17.24■□□□□ 0.353e-7■■■□□ 15.1
APH1A-204ENST00000414276 IGF2BP3O00425 579 aaKnown RBP eCLIP18.54■□□□□ 0.569e-7■■■□□ 14.9
APH1A-204ENST00000414276 CPSF6Q16630 551 aaKnown RBP eCLIP15.95■□□□□ 0.145e-6■■□□□ 13.1
APH1A-204ENST00000414276 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■□□□ 12.7
APH1A-204ENST00000414276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.64■□□□□ 0.574e-10■■□□□ 12.3
APH1A-204ENST00000414276 YBX3P16989 372 aaKnown RBP eCLIP20.02■□□□□ 0.792e-8■■□□□ 11.8
APH1A-204ENST00000414276 PCBP2Q15366 365 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■□□□ 11.4
APH1A-204ENST00000414276 FUBP3Q96I24 572 aaKnown RBP eCLIP16.71■□□□□ 0.271e-11■□□□□ 11
APH1A-204ENST00000414276 GTF2F1P35269 517 aaKnown RBP eCLIP18.68■□□□□ 0.581e-8■□□□□ 9.9
APH1A-204ENST00000414276 SND1Q7KZF4 910 aaKnown RBP eCLIP17.68■□□□□ 0.429e-9■□□□□ 8.5
APH1A-204ENST00000414276 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.18■□□□□ 0.344e-6■□□□□ 8.4
Retrieved 33 of 33 RNA–protein pairs in 9 ms