RNA–Protein interactions for RNA: ENST00000413392.5

CBX8-202, Transcript of chromobox 8, humanhuman

TSL 3

Gene CBX8, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-202ENST00000413392 NISCHQ9Y2I1 1504 aa41.53■■■■■ 4.24
CBX8-202ENST00000413392 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
CBX8-202ENST00000413392 ABCC9O60706 1549 aa35.83■■■■□ 3.33
CBX8-202ENST00000413392 NACADO15069 1562 aa34.68■■■■□ 3.14
CBX8-202ENST00000413392 RB1CC1Q8TDY2 1594 aa34.68■■■■□ 3.14
CBX8-202ENST00000413392 ZCCHC6Q5VYS8 1495 aaKnown RBP34.65■■■■□ 3.14
CBX8-202ENST00000413392 MYO15BQ96JP2 1530 aa34.57■■■■□ 3.12
CBX8-202ENST00000413392 DCAF8L2P0C7V8 631 aa34.49■■■■□ 3.11
CBX8-202ENST00000413392 DCAF1Q9Y4B6 1507 aa34.46■■■■□ 3.11
CBX8-202ENST00000413392 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
CBX8-202ENST00000413392 SCRIBQ14160 1630 aa33.61■■■□□ 2.97
CBX8-202ENST00000413392 BICRAQ9NZM4 1560 aa33.53■■■□□ 2.96
CBX8-202ENST00000413392 PABPN1Q86U42 306 aaKnown RBP eCLIP33.44■■■□□ 2.94
CBX8-202ENST00000413392 SHROOM4Q9ULL8 1493 aa33.38■■■□□ 2.93
CBX8-202ENST00000413392 EIF4G1Q04637 1599 aaKnown RBP32.68■■■□□ 2.82
CBX8-202ENST00000413392 DNAJC5BQ9UF47 199 aa32.62■■■□□ 2.81
CBX8-202ENST00000413392 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
CBX8-202ENST00000413392 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
CBX8-202ENST00000413392 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
CBX8-202ENST00000413392 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
CBX8-202ENST00000413392 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
CBX8-202ENST00000413392 ATAD2BQ9ULI0 1458 aa31.97■■■□□ 2.71
CBX8-202ENST00000413392 MROH2BQ7Z745 1585 aa31.95■■■□□ 2.71
CBX8-202ENST00000413392 NCAPD3P42695 1498 aa31.95■■■□□ 2.7
CBX8-202ENST00000413392 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
CBX8-202ENST00000413392 HMGXB3Q12766 1538 aa31.86■■■□□ 2.69
CBX8-202ENST00000413392 BAZ1BQ9UIG0 1483 aaKnown RBP31.74■■■□□ 2.67
CBX8-202ENST00000413392 RSF1Q96T23 1441 aaPredicted RBP31.66■■■□□ 2.66
CBX8-202ENST00000413392 WIZO95785 1651 aa31.63■■■□□ 2.65
CBX8-202ENST00000413392 TOP2AP11388 1531 aaKnown RBP31.37■■■□□ 2.61
CBX8-202ENST00000413392 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
CBX8-202ENST00000413392 NESP48681 1621 aa31.03■■■□□ 2.56
CBX8-202ENST00000413392 CADPSQ9ULU8 1353 aa31.01■■■□□ 2.55
CBX8-202ENST00000413392 ERCC6Q03468 1493 aa30.96■■■□□ 2.55
CBX8-202ENST00000413392 CCDC88BA6NC98 1476 aa30.93■■■□□ 2.54
CBX8-202ENST00000413392 PDS5BQ9NTI5 1447 aa30.9■■■□□ 2.54
CBX8-202ENST00000413392 SUPT5HO00267 1087 aaKnown RBP30.88■■■□□ 2.53
CBX8-202ENST00000413392 CFTRP13569 1480 aa30.88■■■□□ 2.53
CBX8-202ENST00000413392 KIF21AQ7Z4S6 1674 aa30.76■■■□□ 2.51
CBX8-202ENST00000413392 PRDM2Q13029 1718 aa30.75■■■□□ 2.51
CBX8-202ENST00000413392 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
CBX8-202ENST00000413392 THOC2Q8NI27 1593 aaKnown RBP30.64■■■□□ 2.5
CBX8-202ENST00000413392 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
CBX8-202ENST00000413392 CUX2O14529 1486 aa30.63■■■□□ 2.49
CBX8-202ENST00000413392 MRC2Q9UBG0 1479 aa30.55■■■□□ 2.48
CBX8-202ENST00000413392 WDR62O43379 1518 aa30.47■■■□□ 2.47
CBX8-202ENST00000413392 URB2Q14146 1524 aaKnown RBP30.31■■■□□ 2.44
CBX8-202ENST00000413392 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
CBX8-202ENST00000413392 DNMBPQ6XZF7 1577 aa30.2■■■□□ 2.43
CBX8-202ENST00000413392 TOPBP1Q92547 1522 aa30.17■■■□□ 2.42
CBX8-202ENST00000413392 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
CBX8-202ENST00000413392 CUX1P39880 1505 aa29.99■■■□□ 2.39
CBX8-202ENST00000413392 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
CBX8-202ENST00000413392 WRNQ14191 1432 aaPredicted RBP eCLIP29.88■■■□□ 2.37
CBX8-202ENST00000413392 FGD5Q6ZNL6 1462 aa29.87■■■□□ 2.37
CBX8-202ENST00000413392 TARBP1Q13395 1621 aaKnown RBP29.85■■■□□ 2.37
CBX8-202ENST00000413392 TOP2BQ02880 1626 aa29.84■■■□□ 2.37
CBX8-202ENST00000413392 BIVM-ERCC5R4GMW8 1640 aa29.84■■■□□ 2.37
CBX8-202ENST00000413392 SOGA1O94964 1423 aa29.79■■■□□ 2.36
CBX8-202ENST00000413392 SYNJ1O43426 1573 aa29.77■■■□□ 2.36
CBX8-202ENST00000413392 WDR97A6NE52 1622 aa29.77■■■□□ 2.36
CBX8-202ENST00000413392 ZNF608Q9ULD9 1512 aaPredicted RBP29.74■■■□□ 2.35
CBX8-202ENST00000413392 RAD54L2Q9Y4B4 1467 aa29.74■■■□□ 2.35
CBX8-202ENST00000413392 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
CBX8-202ENST00000413392 ABCA10Q8WWZ4 1543 aa29.64■■■□□ 2.34
CBX8-202ENST00000413392 AQRO60306 1485 aaKnown RBP eCLIP29.59■■■□□ 2.331e-7■■■■■ 31.7
CBX8-202ENST00000413392 TDRD9Q8NDG6 1382 aaKnown RBP29.55■■■□□ 2.32
CBX8-202ENST00000413392 ABCA5Q8WWZ7 1642 aa29.51■■■□□ 2.31
CBX8-202ENST00000413392 GAPVD1Q14C86 1478 aa29.48■■■□□ 2.31
CBX8-202ENST00000413392 GRIN2BQ13224 1484 aa29.48■■■□□ 2.31
CBX8-202ENST00000413392 PBRM1Q86U86 1689 aa29.45■■■□□ 2.31
CBX8-202ENST00000413392 MAGI1Q96QZ7 1491 aaPredicted RBP29.42■■■□□ 2.3
CBX8-202ENST00000413392 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
CBX8-202ENST00000413392 DNAJC5Q9H3Z4 198 aa29.37■■■□□ 2.29
CBX8-202ENST00000413392 ERICH3Q5RHP9 1530 aa29.32■■■□□ 2.28
CBX8-202ENST00000413392 CHD1O14646 1710 aa29.3■■■□□ 2.28
CBX8-202ENST00000413392 OSCARQ8IYS5 282 aa29.29■■■□□ 2.28
CBX8-202ENST00000413392 KIF27Q86VH2 1401 aa29.28■■■□□ 2.28
CBX8-202ENST00000413392 SYNJ2O15056 1496 aa29.27■■■□□ 2.28
CBX8-202ENST00000413392 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
CBX8-202ENST00000413392 ADAMTS12P58397 1594 aa29.22■■■□□ 2.27
CBX8-202ENST00000413392 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
CBX8-202ENST00000413392 FBLN2P98095 1184 aa29.19■■■□□ 2.26
CBX8-202ENST00000413392 FHAD1B1AJZ9 1412 aa29.17■■■□□ 2.26
CBX8-202ENST00000413392 CUL7Q14999 1698 aa29.11■■■□□ 2.25
CBX8-202ENST00000413392 GRIN2AQ12879 1464 aa29.09■■■□□ 2.25
CBX8-202ENST00000413392 IGF1RP08069 1367 aa29.06■■■□□ 2.24
CBX8-202ENST00000413392 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
CBX8-202ENST00000413392 NUP160Q12769 1436 aa28.95■■■□□ 2.23
CBX8-202ENST00000413392 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
CBX8-202ENST00000413392 CHIC1Q5VXU3 224 aa28.92■■■□□ 2.22
CBX8-202ENST00000413392 CEP170Q5SW79 1584 aa28.91■■■□□ 2.22
CBX8-202ENST00000413392 RUSC2Q8N2Y8 1516 aa28.9■■■□□ 2.22
CBX8-202ENST00000413392 EEA1Q15075 1411 aa28.87■■■□□ 2.21
CBX8-202ENST00000413392 ARHGEF11O15085 1522 aa28.84■■■□□ 2.21
CBX8-202ENST00000413392 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
CBX8-202ENST00000413392 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
CBX8-202ENST00000413392 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
CBX8-202ENST00000413392 RAPGEF2Q9Y4G8 1499 aa28.8■■■□□ 2.2
CBX8-202ENST00000413392 SHROOM2Q13796 1616 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 1111.8 ms