RNA–Protein interactions for RNA: ENST00000413065.5

SEM1-203, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SEM1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-203ENST00000413065 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.07
SEM1-203ENST00000413065 ABCC9O60706 1549 aa20.74■□□□□ 0.91
SEM1-203ENST00000413065 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
SEM1-203ENST00000413065 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
SEM1-203ENST00000413065 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
SEM1-203ENST00000413065 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
SEM1-203ENST00000413065 DNAJC5Q9H3Z4 198 aa19.15■□□□□ 0.66
SEM1-203ENST00000413065 NACADO15069 1562 aa18.98■□□□□ 0.63
SEM1-203ENST00000413065 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
SEM1-203ENST00000413065 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
SEM1-203ENST00000413065 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.59
SEM1-203ENST00000413065 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
SEM1-203ENST00000413065 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
SEM1-203ENST00000413065 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
SEM1-203ENST00000413065 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
SEM1-203ENST00000413065 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
SEM1-203ENST00000413065 CUX2O14529 1486 aa18.2■□□□□ 0.5
SEM1-203ENST00000413065 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
SEM1-203ENST00000413065 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
SEM1-203ENST00000413065 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
SEM1-203ENST00000413065 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.45
SEM1-203ENST00000413065 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
SEM1-203ENST00000413065 NESP48681 1621 aa17.53■□□□□ 0.4
SEM1-203ENST00000413065 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
SEM1-203ENST00000413065 THOC2Q8NI27 1593 aaKnown RBP17.47■□□□□ 0.39
SEM1-203ENST00000413065 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
SEM1-203ENST00000413065 ATAD2BQ9ULI0 1458 aa17.35■□□□□ 0.37
SEM1-203ENST00000413065 AEBP2Q6ZN18 517 aaPredicted RBP17.33■□□□□ 0.36
SEM1-203ENST00000413065 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
SEM1-203ENST00000413065 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
SEM1-203ENST00000413065 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
SEM1-203ENST00000413065 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
SEM1-203ENST00000413065 BAZ1AQ9NRL2 1556 aaPredicted RBP17.26■□□□□ 0.35
SEM1-203ENST00000413065 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
SEM1-203ENST00000413065 BAZ1BQ9UIG0 1483 aaKnown RBP17.21■□□□□ 0.35
SEM1-203ENST00000413065 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
SEM1-203ENST00000413065 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
SEM1-203ENST00000413065 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
SEM1-203ENST00000413065 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
SEM1-203ENST00000413065 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
SEM1-203ENST00000413065 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
SEM1-203ENST00000413065 WDR62O43379 1518 aa17.07■□□□□ 0.32
SEM1-203ENST00000413065 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
SEM1-203ENST00000413065 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
SEM1-203ENST00000413065 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
SEM1-203ENST00000413065 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
SEM1-203ENST00000413065 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.3
SEM1-203ENST00000413065 FANCD2Q9BXW9 1451 aa16.81■□□□□ 0.28
SEM1-203ENST00000413065 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
SEM1-203ENST00000413065 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
SEM1-203ENST00000413065 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
SEM1-203ENST00000413065 FBLN2P98095 1184 aa16.63■□□□□ 0.25
SEM1-203ENST00000413065 ZNF608Q9ULD9 1512 aaPredicted RBP16.62■□□□□ 0.25
SEM1-203ENST00000413065 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
SEM1-203ENST00000413065 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
SEM1-203ENST00000413065 CFTRP13569 1480 aa16.58■□□□□ 0.24
SEM1-203ENST00000413065 ILDR1Q86SU0 546 aaPredicted RBP16.57■□□□□ 0.24
SEM1-203ENST00000413065 CHD1O14646 1710 aa16.5■□□□□ 0.23
SEM1-203ENST00000413065 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
SEM1-203ENST00000413065 WIZO95785 1651 aa16.48■□□□□ 0.23
SEM1-203ENST00000413065 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
SEM1-203ENST00000413065 TOPBP1Q92547 1522 aa16.36■□□□□ 0.21
SEM1-203ENST00000413065 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
SEM1-203ENST00000413065 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
SEM1-203ENST00000413065 PRDM2Q13029 1718 aa16.3■□□□□ 0.2
SEM1-203ENST00000413065 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
SEM1-203ENST00000413065 CLASP1Q7Z460 1538 aa16.27■□□□□ 0.2
SEM1-203ENST00000413065 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
SEM1-203ENST00000413065 DNMBPQ6XZF7 1577 aa16.24■□□□□ 0.19
SEM1-203ENST00000413065 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
SEM1-203ENST00000413065 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
SEM1-203ENST00000413065 SNAPC4Q5SXM2 1469 aa16.22■□□□□ 0.19
SEM1-203ENST00000413065 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
SEM1-203ENST00000413065 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
SEM1-203ENST00000413065 KDM4FA0A1W2PPD8 638 aa16.13■□□□□ 0.17
SEM1-203ENST00000413065 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
SEM1-203ENST00000413065 SOGA1O94964 1423 aa16.11■□□□□ 0.17
SEM1-203ENST00000413065 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
SEM1-203ENST00000413065 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
SEM1-203ENST00000413065 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
SEM1-203ENST00000413065 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
SEM1-203ENST00000413065 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
SEM1-203ENST00000413065 FAM69CQ0P6D2 419 aa16.02■□□□□ 0.16
SEM1-203ENST00000413065 KIF13AQ9H1H9 1805 aa16.01■□□□□ 0.15
SEM1-203ENST00000413065 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
SEM1-203ENST00000413065 KDM6BO15054 1643 aa15.97■□□□□ 0.15
SEM1-203ENST00000413065 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.15
SEM1-203ENST00000413065 FGD5Q6ZNL6 1462 aa15.94■□□□□ 0.14
SEM1-203ENST00000413065 FBXO41Q8TF61 875 aa15.91■□□□□ 0.14
SEM1-203ENST00000413065 ABCC10Q5T3U5 1492 aa15.9■□□□□ 0.14
SEM1-203ENST00000413065 CEP170Q5SW79 1584 aa15.89■□□□□ 0.13
SEM1-203ENST00000413065 HECW2Q9P2P5 1572 aa15.88■□□□□ 0.13
SEM1-203ENST00000413065 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
SEM1-203ENST00000413065 ADGRL1O94910 1474 aa15.84■□□□□ 0.13
SEM1-203ENST00000413065 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
SEM1-203ENST00000413065 DIP2BQ9P265 1576 aa15.8■□□□□ 0.12
SEM1-203ENST00000413065 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
SEM1-203ENST00000413065 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
SEM1-203ENST00000413065 TSPOAP1O95153 1857 aa15.78■□□□□ 0.12
SEM1-203ENST00000413065 NUP160Q12769 1436 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms