RNA–Protein interactions for RNA: ENST00000412008.5

VILL-203, Transcript of villin like, humanhuman

TSL 3

Gene VILL, Length 813 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VILL-203ENST00000412008 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
VILL-203ENST00000412008 ABCC9O60706 1549 aa24.89■■□□□ 1.57
VILL-203ENST00000412008 CCDC180Q9P1Z9 1646 aa24.7■■□□□ 1.54
VILL-203ENST00000412008 DNAJC5BQ9UF47 199 aa23.55■■□□□ 1.36
VILL-203ENST00000412008 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
VILL-203ENST00000412008 NACADO15069 1562 aa23.31■■□□□ 1.32
VILL-203ENST00000412008 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
VILL-203ENST00000412008 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
VILL-203ENST00000412008 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.28
VILL-203ENST00000412008 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
VILL-203ENST00000412008 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
VILL-203ENST00000412008 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
VILL-203ENST00000412008 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
VILL-203ENST00000412008 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
VILL-203ENST00000412008 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
VILL-203ENST00000412008 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
VILL-203ENST00000412008 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
VILL-203ENST00000412008 EIF4G1Q04637 1599 aaKnown RBP22.39■■□□□ 1.18
VILL-203ENST00000412008 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
VILL-203ENST00000412008 NCAPD3P42695 1498 aa21.52■■□□□ 1.03
VILL-203ENST00000412008 CUX2O14529 1486 aa21.49■■□□□ 1.03
VILL-203ENST00000412008 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.03
VILL-203ENST00000412008 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
VILL-203ENST00000412008 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
VILL-203ENST00000412008 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
VILL-203ENST00000412008 HMGXB3Q12766 1538 aa21.39■■□□□ 1.02
VILL-203ENST00000412008 NESP48681 1621 aa21.36■■□□□ 1.01
VILL-203ENST00000412008 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
VILL-203ENST00000412008 MROH2BQ7Z745 1585 aa21.26■□□□□ 0.99
VILL-203ENST00000412008 PEG3Q9GZU2 1588 aa21.26■□□□□ 0.99
VILL-203ENST00000412008 THOC2Q8NI27 1593 aaKnown RBP21.24■□□□□ 0.99
VILL-203ENST00000412008 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
VILL-203ENST00000412008 KIF21AQ7Z4S6 1674 aa21.13■□□□□ 0.97
VILL-203ENST00000412008 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
VILL-203ENST00000412008 RSF1Q96T23 1441 aaPredicted RBP21.1■□□□□ 0.97
VILL-203ENST00000412008 WIZO95785 1651 aa21.04■□□□□ 0.96
VILL-203ENST00000412008 PDS5BQ9NTI5 1447 aa20.89■□□□□ 0.94
VILL-203ENST00000412008 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
VILL-203ENST00000412008 WDR62O43379 1518 aa20.83■□□□□ 0.92
VILL-203ENST00000412008 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
VILL-203ENST00000412008 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
VILL-203ENST00000412008 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
VILL-203ENST00000412008 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
VILL-203ENST00000412008 FANCD2Q9BXW9 1451 aa20.64■□□□□ 0.89
VILL-203ENST00000412008 CFTRP13569 1480 aa20.58■□□□□ 0.89
VILL-203ENST00000412008 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
VILL-203ENST00000412008 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
VILL-203ENST00000412008 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
VILL-203ENST00000412008 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
VILL-203ENST00000412008 OSCARQ8IYS5 282 aa20.35■□□□□ 0.85
VILL-203ENST00000412008 RIMBP3CA6NJZ7 1639 aa20.33■□□□□ 0.84
VILL-203ENST00000412008 RIMBP3BA6NNM3 1639 aa20.33■□□□□ 0.84
VILL-203ENST00000412008 RIMBP3Q9UFD9 1639 aa20.33■□□□□ 0.84
VILL-203ENST00000412008 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
VILL-203ENST00000412008 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
VILL-203ENST00000412008 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
VILL-203ENST00000412008 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
VILL-203ENST00000412008 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
VILL-203ENST00000412008 CHD1O14646 1710 aa20.17■□□□□ 0.82
VILL-203ENST00000412008 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
VILL-203ENST00000412008 TARBP1Q13395 1621 aaKnown RBP20.14■□□□□ 0.81
VILL-203ENST00000412008 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
VILL-203ENST00000412008 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.82e-7■■■■■ 47.5
VILL-203ENST00000412008 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
VILL-203ENST00000412008 ARAP1Q96P48 1450 aa20.01■□□□□ 0.79
VILL-203ENST00000412008 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
VILL-203ENST00000412008 CUX1P39880 1505 aa19.93■□□□□ 0.78
VILL-203ENST00000412008 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
VILL-203ENST00000412008 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
VILL-203ENST00000412008 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.77
VILL-203ENST00000412008 SNAPC4Q5SXM2 1469 aa19.88■□□□□ 0.77
VILL-203ENST00000412008 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
VILL-203ENST00000412008 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
VILL-203ENST00000412008 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
VILL-203ENST00000412008 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
VILL-203ENST00000412008 FBLN2P98095 1184 aa19.86■□□□□ 0.77
VILL-203ENST00000412008 WDR97A6NE52 1622 aa19.86■□□□□ 0.77
VILL-203ENST00000412008 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
VILL-203ENST00000412008 SOGA1O94964 1423 aa19.85■□□□□ 0.77
VILL-203ENST00000412008 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
VILL-203ENST00000412008 MAGI1Q96QZ7 1491 aaPredicted RBP19.76■□□□□ 0.75
VILL-203ENST00000412008 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
VILL-203ENST00000412008 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
VILL-203ENST00000412008 SYNJ2O15056 1496 aa19.71■□□□□ 0.75
VILL-203ENST00000412008 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
VILL-203ENST00000412008 ABCA10Q8WWZ4 1543 aa19.68■□□□□ 0.74
VILL-203ENST00000412008 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
VILL-203ENST00000412008 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
VILL-203ENST00000412008 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
VILL-203ENST00000412008 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
VILL-203ENST00000412008 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
VILL-203ENST00000412008 GRIN2AQ12879 1464 aa19.52■□□□□ 0.72
VILL-203ENST00000412008 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
VILL-203ENST00000412008 NUP160Q12769 1436 aa19.46■□□□□ 0.71
VILL-203ENST00000412008 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
VILL-203ENST00000412008 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
VILL-203ENST00000412008 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
VILL-203ENST00000412008 KIF13AQ9H1H9 1805 aa19.38■□□□□ 0.69
VILL-203ENST00000412008 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
VILL-203ENST00000412008 CUL7Q14999 1698 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms