RNA–Protein interactions for RNA: ENST00000411534.1

TRO-206, Transcript of trophinin, humanhuman

TSL 2

Gene TRO, Length 1,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-206ENST00000411534 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.41
TRO-206ENST00000411534 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
TRO-206ENST00000411534 ABCC9O60706 1549 aa20.83■□□□□ 0.92
TRO-206ENST00000411534 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
TRO-206ENST00000411534 NACADO15069 1562 aa19.95■□□□□ 0.78
TRO-206ENST00000411534 ZCCHC6Q5VYS8 1495 aaKnown RBP19.94■□□□□ 0.78
TRO-206ENST00000411534 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
TRO-206ENST00000411534 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
TRO-206ENST00000411534 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
TRO-206ENST00000411534 DCAF1Q9Y4B6 1507 aa19.74■□□□□ 0.75
TRO-206ENST00000411534 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
TRO-206ENST00000411534 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
TRO-206ENST00000411534 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRO-206ENST00000411534 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
TRO-206ENST00000411534 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
TRO-206ENST00000411534 EIF4G1Q04637 1599 aaKnown RBP18.94■□□□□ 0.62
TRO-206ENST00000411534 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
TRO-206ENST00000411534 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
TRO-206ENST00000411534 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
TRO-206ENST00000411534 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
TRO-206ENST00000411534 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
TRO-206ENST00000411534 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
TRO-206ENST00000411534 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
TRO-206ENST00000411534 NCAPD3P42695 1498 aa18.39■□□□□ 0.54
TRO-206ENST00000411534 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
TRO-206ENST00000411534 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
TRO-206ENST00000411534 WIZO95785 1651 aa18.3■□□□□ 0.52
TRO-206ENST00000411534 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
TRO-206ENST00000411534 RSF1Q96T23 1441 aaPredicted RBP18.18■□□□□ 0.5
TRO-206ENST00000411534 NESP48681 1621 aa18.09■□□□□ 0.49
TRO-206ENST00000411534 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
TRO-206ENST00000411534 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
TRO-206ENST00000411534 KIF21AQ7Z4S6 1674 aa17.92■□□□□ 0.46
TRO-206ENST00000411534 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
TRO-206ENST00000411534 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
TRO-206ENST00000411534 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
TRO-206ENST00000411534 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
TRO-206ENST00000411534 CFTRP13569 1480 aa17.77■□□□□ 0.44
TRO-206ENST00000411534 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
TRO-206ENST00000411534 CUX2O14529 1486 aa17.72■□□□□ 0.43
TRO-206ENST00000411534 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
TRO-206ENST00000411534 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
TRO-206ENST00000411534 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
TRO-206ENST00000411534 MRC2Q9UBG0 1479 aa17.64■□□□□ 0.41
TRO-206ENST00000411534 WDR62O43379 1518 aa17.64■□□□□ 0.41
TRO-206ENST00000411534 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
TRO-206ENST00000411534 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.41
TRO-206ENST00000411534 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
TRO-206ENST00000411534 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
TRO-206ENST00000411534 CUX1P39880 1505 aa17.34■□□□□ 0.37
TRO-206ENST00000411534 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
TRO-206ENST00000411534 ZNF608Q9ULD9 1512 aaPredicted RBP17.29■□□□□ 0.36
TRO-206ENST00000411534 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
TRO-206ENST00000411534 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
TRO-206ENST00000411534 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
TRO-206ENST00000411534 EIF4G3O43432 1585 aaKnown RBP17.24■□□□□ 0.35
TRO-206ENST00000411534 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
TRO-206ENST00000411534 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
TRO-206ENST00000411534 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
TRO-206ENST00000411534 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
TRO-206ENST00000411534 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
TRO-206ENST00000411534 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
TRO-206ENST00000411534 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
TRO-206ENST00000411534 DNAJC5Q9H3Z4 198 aa17.15■□□□□ 0.34
TRO-206ENST00000411534 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
TRO-206ENST00000411534 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRO-206ENST00000411534 SOGA1O94964 1423 aa17.1■□□□□ 0.33
TRO-206ENST00000411534 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
TRO-206ENST00000411534 CHD1O14646 1710 aa17.06■□□□□ 0.32
TRO-206ENST00000411534 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
TRO-206ENST00000411534 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
TRO-206ENST00000411534 TDRD9Q8NDG6 1382 aaKnown RBP17.04■□□□□ 0.32
TRO-206ENST00000411534 ABCA10Q8WWZ4 1543 aa17.03■□□□□ 0.32
TRO-206ENST00000411534 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
TRO-206ENST00000411534 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
TRO-206ENST00000411534 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
TRO-206ENST00000411534 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
TRO-206ENST00000411534 ADAMTS12P58397 1594 aa16.89■□□□□ 0.3
TRO-206ENST00000411534 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
TRO-206ENST00000411534 SYNJ2O15056 1496 aa16.84■□□□□ 0.29
TRO-206ENST00000411534 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
TRO-206ENST00000411534 RIMBP3CA6NJZ7 1639 aa16.82■□□□□ 0.28
TRO-206ENST00000411534 RIMBP3BA6NNM3 1639 aa16.82■□□□□ 0.28
TRO-206ENST00000411534 RIMBP3Q9UFD9 1639 aa16.82■□□□□ 0.28
TRO-206ENST00000411534 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
TRO-206ENST00000411534 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
TRO-206ENST00000411534 CEP170Q5SW79 1584 aa16.77■□□□□ 0.27
TRO-206ENST00000411534 GRIN2AQ12879 1464 aa16.76■□□□□ 0.27
TRO-206ENST00000411534 FBLN2P98095 1184 aa16.76■□□□□ 0.27
TRO-206ENST00000411534 FHAD1B1AJZ9 1412 aa16.72■□□□□ 0.27
TRO-206ENST00000411534 NUP160Q12769 1436 aa16.7■□□□□ 0.26
TRO-206ENST00000411534 CHMP7Q8WUX9 453 aaPredicted RBP16.7■□□□□ 0.26
TRO-206ENST00000411534 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
TRO-206ENST00000411534 TRIM41Q8WV44 630 aa16.69■□□□□ 0.26
TRO-206ENST00000411534 KIF27Q86VH2 1401 aa16.68■□□□□ 0.26
TRO-206ENST00000411534 CUL7Q14999 1698 aa16.68■□□□□ 0.26
TRO-206ENST00000411534 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
TRO-206ENST00000411534 ERCC6L2Q5T890 1561 aa16.67■□□□□ 0.26
TRO-206ENST00000411534 IGF1RP08069 1367 aa16.66■□□□□ 0.26
TRO-206ENST00000411534 SHROOM2Q13796 1616 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms