RNA–Protein interactions for RNA: ENST00000411510.5

NCOR1-206, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 1,883 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-206ENST00000411510 NISCHQ9Y2I1 1504 aa52.16■■■■■ 5.94
NCOR1-206ENST00000411510 CCDC180Q9P1Z9 1646 aa45.62■■■■■ 4.89
NCOR1-206ENST00000411510 ABCC9O60706 1549 aa43.91■■■■■ 4.62
NCOR1-206ENST00000411510 ZCCHC6Q5VYS8 1495 aaKnown RBP43.68■■■■■ 4.58
NCOR1-206ENST00000411510 DCAF8L2P0C7V8 631 aa43.6■■■■■ 4.57
NCOR1-206ENST00000411510 DCAF1Q9Y4B6 1507 aa42.97■■■■■ 4.47
NCOR1-206ENST00000411510 NACADO15069 1562 aa42.66■■■■■ 4.42
NCOR1-206ENST00000411510 MYO15BQ96JP2 1530 aa42.64■■■■■ 4.42
NCOR1-206ENST00000411510 RB1CC1Q8TDY2 1594 aa42.47■■■■■ 4.39
NCOR1-206ENST00000411510 SHROOM4Q9ULL8 1493 aa42.47■■■■■ 4.39
NCOR1-206ENST00000411510 SCRIBQ14160 1630 aa42.11■■■■■ 4.33
NCOR1-206ENST00000411510 UNC13AQ9UPW8 1703 aa41.6■■■■■ 4.25
NCOR1-206ENST00000411510 PABPN1Q86U42 306 aaKnown RBP eCLIP41.38■■■■■ 4.22
NCOR1-206ENST00000411510 BICRAQ9NZM4 1560 aa41.2■■■■■ 4.19
NCOR1-206ENST00000411510 CECR2Q9BXF3 1484 aa40.68■■■■■ 4.1
NCOR1-206ENST00000411510 SUPT5HO00267 1087 aaKnown RBP40.58■■■■■ 4.09
NCOR1-206ENST00000411510 MROH2BQ7Z745 1585 aa40.34■■■■■ 4.05
NCOR1-206ENST00000411510 BAZ1AQ9NRL2 1556 aaPredicted RBP40.31■■■■■ 4.04
NCOR1-206ENST00000411510 RSF1Q96T23 1441 aaPredicted RBP40.3■■■■■ 4.04
NCOR1-206ENST00000411510 SMARCA4P51532 1647 aa40.21■■■■■ 4.03
NCOR1-206ENST00000411510 EIF4G1Q04637 1599 aaKnown RBP40.05■■■■■ 4
NCOR1-206ENST00000411510 WIZO95785 1651 aa39.99■■■■□ 3.99
NCOR1-206ENST00000411510 ATAD2BQ9ULI0 1458 aa39.71■■■■□ 3.95
NCOR1-206ENST00000411510 PEG3Q9GZU2 1588 aa39.63■■■■□ 3.94
NCOR1-206ENST00000411510 SMARCA2P51531 1590 aa39.62■■■■□ 3.93
NCOR1-206ENST00000411510 CC2D2AQ9P2K1 1620 aa39.62■■■■□ 3.93
NCOR1-206ENST00000411510 BAZ1BQ9UIG0 1483 aaKnown RBP39.49■■■■□ 3.91
NCOR1-206ENST00000411510 TOP2AP11388 1531 aaKnown RBP39.48■■■■□ 3.91
NCOR1-206ENST00000411510 NCAPD3P42695 1498 aa39.4■■■■□ 3.9
NCOR1-206ENST00000411510 HMGXB3Q12766 1538 aa39.27■■■■□ 3.88
NCOR1-206ENST00000411510 DNAJC5BQ9UF47 199 aa39.25■■■■□ 3.87
NCOR1-206ENST00000411510 CCDC88BA6NC98 1476 aa39.14■■■■□ 3.86
NCOR1-206ENST00000411510 CADPSQ9ULU8 1353 aa38.43■■■■□ 3.74
NCOR1-206ENST00000411510 CHIC1Q5VXU3 224 aa38.41■■■■□ 3.74
NCOR1-206ENST00000411510 CFTRP13569 1480 aa38.4■■■■□ 3.74
NCOR1-206ENST00000411510 NESP48681 1621 aa38.36■■■■□ 3.73
NCOR1-206ENST00000411510 ABCC8Q09428 1581 aa38.21■■■■□ 3.71
NCOR1-206ENST00000411510 LAMC3Q9Y6N6 1575 aa38.15■■■■□ 3.7
NCOR1-206ENST00000411510 TRIM41Q8WV44 630 aa38.11■■■■□ 3.69
NCOR1-206ENST00000411510 PRDM2Q13029 1718 aa38.08■■■■□ 3.69
NCOR1-206ENST00000411510 FANCD2Q9BXW9 1451 aa38.02■■■■□ 3.68
NCOR1-206ENST00000411510 WRNQ14191 1432 aaPredicted RBP eCLIP37.97■■■■□ 3.67
NCOR1-206ENST00000411510 PDS5BQ9NTI5 1447 aa37.94■■■■□ 3.66
NCOR1-206ENST00000411510 CEP164Q9UPV0 1460 aa37.83■■■■□ 3.65
NCOR1-206ENST00000411510 SYNJ1O43426 1573 aa37.83■■■■□ 3.65
NCOR1-206ENST00000411510 KIF21AQ7Z4S6 1674 aa37.81■■■■□ 3.64
NCOR1-206ENST00000411510 CUX1P39880 1505 aa37.74■■■■□ 3.63
NCOR1-206ENST00000411510 ERCC6Q03468 1493 aa37.7■■■■□ 3.62
NCOR1-206ENST00000411510 TOP2BQ02880 1626 aa37.65■■■■□ 3.62
NCOR1-206ENST00000411510 BIVM-ERCC5R4GMW8 1640 aa37.58■■■■□ 3.61
NCOR1-206ENST00000411510 URB2Q14146 1524 aaKnown RBP37.57■■■■□ 3.61
NCOR1-206ENST00000411510 FAM9AQ8IZU1 332 aaPredicted RBP37.54■■■■□ 3.6
NCOR1-206ENST00000411510 TOPBP1Q92547 1522 aa37.53■■■■□ 3.6
NCOR1-206ENST00000411510 DNMBPQ6XZF7 1577 aa37.52■■■■□ 3.6
NCOR1-206ENST00000411510 MRC2Q9UBG0 1479 aa37.48■■■■□ 3.59
NCOR1-206ENST00000411510 FGD5Q6ZNL6 1462 aa37.44■■■■□ 3.58
NCOR1-206ENST00000411510 SOGA1O94964 1423 aa37.38■■■■□ 3.57
NCOR1-206ENST00000411510 POLA1P09884 1462 aaPredicted RBP37.32■■■■□ 3.56
NCOR1-206ENST00000411510 THOC2Q8NI27 1593 aaKnown RBP37.28■■■■□ 3.56
NCOR1-206ENST00000411510 RUSC2Q8N2Y8 1516 aa37.28■■■■□ 3.56
NCOR1-206ENST00000411510 RAD54L2Q9Y4B4 1467 aa37.27■■■■□ 3.56
NCOR1-206ENST00000411510 WDR62O43379 1518 aa37.26■■■■□ 3.55
NCOR1-206ENST00000411510 EHMT2Q96KQ7 1210 aa37.17■■■■□ 3.54
NCOR1-206ENST00000411510 CUX2O14529 1486 aa37.13■■■■□ 3.53
NCOR1-206ENST00000411510 LOC105371045A0A1W2PR82 267 aa37.05■■■■□ 3.52
NCOR1-206ENST00000411510 KIF27Q86VH2 1401 aa37.04■■■■□ 3.52
NCOR1-206ENST00000411510 EEA1Q15075 1411 aa37.02■■■■□ 3.52
NCOR1-206ENST00000411510 CSRNP3Q8WYN3 585 aa37.02■■■■□ 3.52
NCOR1-206ENST00000411510 ABCA10Q8WWZ4 1543 aa37.02■■■■□ 3.52
NCOR1-206ENST00000411510 TDRD9Q8NDG6 1382 aaKnown RBP36.98■■■■□ 3.51
NCOR1-206ENST00000411510 TARBP1Q13395 1621 aaKnown RBP36.96■■■■□ 3.51
NCOR1-206ENST00000411510 IFT140Q96RY7 1462 aa36.92■■■■□ 3.5
NCOR1-206ENST00000411510 WDR97A6NE52 1622 aa36.9■■■■□ 3.5
NCOR1-206ENST00000411510 ZNF608Q9ULD9 1512 aaPredicted RBP36.84■■■■□ 3.49
NCOR1-206ENST00000411510 AQRO60306 1485 aaKnown RBP eCLIP36.82■■■■□ 3.485e-8■■■□□ 17.4
NCOR1-206ENST00000411510 GAPVD1Q14C86 1478 aa36.78■■■■□ 3.48
NCOR1-206ENST00000411510 IGF1RP08069 1367 aa36.78■■■■□ 3.48
NCOR1-206ENST00000411510 ABCA5Q8WWZ7 1642 aa36.75■■■■□ 3.47
NCOR1-206ENST00000411510 EIF4G3O43432 1585 aaKnown RBP36.63■■■■□ 3.46
NCOR1-206ENST00000411510 RAPGEF2Q9Y4G8 1499 aa36.62■■■■□ 3.45
NCOR1-206ENST00000411510 UBTFP17480 764 aaKnown RBP36.62■■■■□ 3.45
NCOR1-206ENST00000411510 CARMIL1Q5VZK9 1371 aa36.61■■■■□ 3.45
NCOR1-206ENST00000411510 PRXQ9BXM0 1461 aa36.6■■■■□ 3.45
NCOR1-206ENST00000411510 KIF21BO75037 1637 aa36.58■■■■□ 3.45
NCOR1-206ENST00000411510 GOLGA3Q08378 1498 aa36.58■■■■□ 3.45
NCOR1-206ENST00000411510 PBRM1Q86U86 1689 aa36.56■■■■□ 3.44
NCOR1-206ENST00000411510 ERICH3Q5RHP9 1530 aa36.56■■■■□ 3.44
NCOR1-206ENST00000411510 GRIN2BQ13224 1484 aa36.55■■■■□ 3.44
NCOR1-206ENST00000411510 CUL7Q14999 1698 aa36.46■■■■□ 3.43
NCOR1-206ENST00000411510 SNAPC4Q5SXM2 1469 aa36.43■■■■□ 3.42
NCOR1-206ENST00000411510 RANGAP1P46060 587 aaPredicted RBP36.37■■■■□ 3.41
NCOR1-206ENST00000411510 FHAD1B1AJZ9 1412 aa36.34■■■■□ 3.41
NCOR1-206ENST00000411510 TNIKQ9UKE5 1360 aa36.34■■■■□ 3.41
NCOR1-206ENST00000411510 ADAMTS12P58397 1594 aa36.34■■■■□ 3.41
NCOR1-206ENST00000411510 FBLN2P98095 1184 aa36.32■■■■□ 3.4
NCOR1-206ENST00000411510 MAGI1Q96QZ7 1491 aaPredicted RBP36.27■■■■□ 3.4
NCOR1-206ENST00000411510 CHMP7Q8WUX9 453 aaPredicted RBP36.24■■■■□ 3.39
NCOR1-206ENST00000411510 CEP162Q5TB80 1403 aa36.18■■■■□ 3.38
NCOR1-206ENST00000411510 SYNJ2O15056 1496 aa36.16■■■■□ 3.38
NCOR1-206ENST00000411510 GRIN2AQ12879 1464 aa36.11■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms