RNA–Protein interactions for RNA: ENST00000411466.6

SRCAP-203, Transcript of Snf2 related CREBBP activator protein, humanhuman

TSL 3

Gene SRCAP, Length 836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRCAP-203ENST00000411466 NISCHQ9Y2I1 1504 aa53.88■■■■■ 6.22
SRCAP-203ENST00000411466 CCDC180Q9P1Z9 1646 aa47.85■■■■■ 5.25
SRCAP-203ENST00000411466 ABCC9O60706 1549 aa46.84■■■■■ 5.09
SRCAP-203ENST00000411466 RB1CC1Q8TDY2 1594 aa45.05■■■■■ 4.8
SRCAP-203ENST00000411466 DCAF8L2P0C7V8 631 aa45.03■■■■■ 4.8
SRCAP-203ENST00000411466 NACADO15069 1562 aa45.02■■■■■ 4.8
SRCAP-203ENST00000411466 ZCCHC6Q5VYS8 1495 aaKnown RBP44.88■■■■■ 4.78
SRCAP-203ENST00000411466 MYO15BQ96JP2 1530 aa44.78■■■■■ 4.76
SRCAP-203ENST00000411466 DCAF1Q9Y4B6 1507 aa44.59■■■■■ 4.73
SRCAP-203ENST00000411466 UNC13AQ9UPW8 1703 aa43.96■■■■■ 4.63
SRCAP-203ENST00000411466 PABPN1Q86U42 306 aaKnown RBP eCLIP43.8■■■■■ 4.6
SRCAP-203ENST00000411466 BICRAQ9NZM4 1560 aa43.69■■■■■ 4.58
SRCAP-203ENST00000411466 SCRIBQ14160 1630 aa43.68■■■■■ 4.58
SRCAP-203ENST00000411466 SHROOM4Q9ULL8 1493 aa43.25■■■■■ 4.51
SRCAP-203ENST00000411466 DNAJC5BQ9UF47 199 aa43.14■■■■■ 4.5
SRCAP-203ENST00000411466 EIF4G1Q04637 1599 aaKnown RBP42.54■■■■■ 4.4
SRCAP-203ENST00000411466 CC2D2AQ9P2K1 1620 aa42.35■■■■■ 4.37
SRCAP-203ENST00000411466 CECR2Q9BXF3 1484 aa42.09■■■■■ 4.33
SRCAP-203ENST00000411466 SMARCA4P51532 1647 aa41.78■■■■■ 4.28
SRCAP-203ENST00000411466 BAZ1AQ9NRL2 1556 aaPredicted RBP41.76■■■■■ 4.27
SRCAP-203ENST00000411466 ATAD2BQ9ULI0 1458 aa41.58■■■■■ 4.25
SRCAP-203ENST00000411466 NCAPD3P42695 1498 aa41.56■■■■■ 4.24
SRCAP-203ENST00000411466 MROH2BQ7Z745 1585 aa41.53■■■■■ 4.24
SRCAP-203ENST00000411466 SMARCA2P51531 1590 aa41.52■■■■■ 4.24
SRCAP-203ENST00000411466 PEG3Q9GZU2 1588 aa41.39■■■■■ 4.22
SRCAP-203ENST00000411466 HMGXB3Q12766 1538 aa41.33■■■■■ 4.21
SRCAP-203ENST00000411466 BAZ1BQ9UIG0 1483 aaKnown RBP41.23■■■■■ 4.19
SRCAP-203ENST00000411466 RSF1Q96T23 1441 aaPredicted RBP41.09■■■■■ 4.17
SRCAP-203ENST00000411466 WIZO95785 1651 aa41.05■■■■■ 4.16
SRCAP-203ENST00000411466 TOP2AP11388 1531 aaKnown RBP40.64■■■■■ 4.1
SRCAP-203ENST00000411466 NESP48681 1621 aa40.53■■■■■ 4.08
SRCAP-203ENST00000411466 LAMC3Q9Y6N6 1575 aa40.44■■■■■ 4.06
SRCAP-203ENST00000411466 ERCC6Q03468 1493 aa40.37■■■■■ 4.05
SRCAP-203ENST00000411466 CADPSQ9ULU8 1353 aa40.35■■■■■ 4.05
SRCAP-203ENST00000411466 PDS5BQ9NTI5 1447 aa40.19■■■■■ 4.02
SRCAP-203ENST00000411466 CCDC88BA6NC98 1476 aa40.18■■■■■ 4.02
SRCAP-203ENST00000411466 CFTRP13569 1480 aa40.12■■■■■ 4.01
SRCAP-203ENST00000411466 SUPT5HO00267 1087 aaKnown RBP40.06■■■■■ 4
SRCAP-203ENST00000411466 KIF21AQ7Z4S6 1674 aa40.01■■■■■ 4
SRCAP-203ENST00000411466 CUX2O14529 1486 aa39.99■■■■□ 3.99
SRCAP-203ENST00000411466 THOC2Q8NI27 1593 aaKnown RBP39.89■■■■□ 3.98
SRCAP-203ENST00000411466 FANCD2Q9BXW9 1451 aa39.88■■■■□ 3.97
SRCAP-203ENST00000411466 CEP164Q9UPV0 1460 aa39.82■■■■□ 3.97
SRCAP-203ENST00000411466 MRC2Q9UBG0 1479 aa39.76■■■■□ 3.96
SRCAP-203ENST00000411466 PRDM2Q13029 1718 aa39.71■■■■□ 3.95
SRCAP-203ENST00000411466 WDR62O43379 1518 aa39.62■■■■□ 3.93
SRCAP-203ENST00000411466 URB2Q14146 1524 aaKnown RBP39.48■■■■□ 3.91
SRCAP-203ENST00000411466 ABCC8Q09428 1581 aa39.25■■■■□ 3.87
SRCAP-203ENST00000411466 TOPBP1Q92547 1522 aa39.24■■■■□ 3.87
SRCAP-203ENST00000411466 DNMBPQ6XZF7 1577 aa39.18■■■■□ 3.86
SRCAP-203ENST00000411466 DNAJC5Q9H3Z4 198 aa39.05■■■■□ 3.84
SRCAP-203ENST00000411466 IFT140Q96RY7 1462 aa38.99■■■■□ 3.83
SRCAP-203ENST00000411466 CUX1P39880 1505 aa38.95■■■■□ 3.83
SRCAP-203ENST00000411466 POLA1P09884 1462 aaPredicted RBP38.91■■■■□ 3.82
SRCAP-203ENST00000411466 FGD5Q6ZNL6 1462 aa38.82■■■■□ 3.81
SRCAP-203ENST00000411466 ZNF608Q9ULD9 1512 aaPredicted RBP38.81■■■■□ 3.8
SRCAP-203ENST00000411466 TARBP1Q13395 1621 aaKnown RBP38.8■■■■□ 3.8
SRCAP-203ENST00000411466 SOGA1O94964 1423 aa38.77■■■■□ 3.8
SRCAP-203ENST00000411466 RAD54L2Q9Y4B4 1467 aa38.74■■■■□ 3.79
SRCAP-203ENST00000411466 WRNQ14191 1432 aaPredicted RBP eCLIP38.72■■■■□ 3.79
SRCAP-203ENST00000411466 EIF4G3O43432 1585 aaKnown RBP38.64■■■■□ 3.78
SRCAP-203ENST00000411466 TOP2BQ02880 1626 aa38.62■■■■□ 3.77
SRCAP-203ENST00000411466 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
SRCAP-203ENST00000411466 AQRO60306 1485 aaKnown RBP eCLIP38.6■■■■□ 3.772e-8■■■■■ 33.4
SRCAP-203ENST00000411466 BIVM-ERCC5R4GMW8 1640 aa38.6■■■■□ 3.77
SRCAP-203ENST00000411466 TDRD9Q8NDG6 1382 aaKnown RBP38.55■■■■□ 3.76
SRCAP-203ENST00000411466 WDR97A6NE52 1622 aa38.49■■■■□ 3.75
SRCAP-203ENST00000411466 ABCA10Q8WWZ4 1543 aa38.45■■■■□ 3.75
SRCAP-203ENST00000411466 OSCARQ8IYS5 282 aa38.32■■■■□ 3.72
SRCAP-203ENST00000411466 GRIN2BQ13224 1484 aa38.31■■■■□ 3.72
SRCAP-203ENST00000411466 GAPVD1Q14C86 1478 aa38.31■■■■□ 3.72
SRCAP-203ENST00000411466 ABCA5Q8WWZ7 1642 aa38.27■■■■□ 3.72
SRCAP-203ENST00000411466 SNAPC4Q5SXM2 1469 aa38.24■■■■□ 3.71
SRCAP-203ENST00000411466 MAGI1Q96QZ7 1491 aaPredicted RBP38.2■■■■□ 3.71
SRCAP-203ENST00000411466 PBRM1Q86U86 1689 aa38.17■■■■□ 3.7
SRCAP-203ENST00000411466 FBLN2P98095 1184 aa38.15■■■■□ 3.7
SRCAP-203ENST00000411466 CHD1O14646 1710 aa38.11■■■■□ 3.69
SRCAP-203ENST00000411466 CHMP7Q8WUX9 453 aaPredicted RBP38.06■■■■□ 3.68
SRCAP-203ENST00000411466 SYNJ2O15056 1496 aa38.05■■■■□ 3.68
SRCAP-203ENST00000411466 ERICH3Q5RHP9 1530 aa37.98■■■■□ 3.67
SRCAP-203ENST00000411466 KIF27Q86VH2 1401 aa37.93■■■■□ 3.66
SRCAP-203ENST00000411466 ADAMTS12P58397 1594 aa37.9■■■■□ 3.66
SRCAP-203ENST00000411466 FHAD1B1AJZ9 1412 aa37.88■■■■□ 3.66
SRCAP-203ENST00000411466 TRIM41Q8WV44 630 aa37.85■■■■□ 3.65
SRCAP-203ENST00000411466 GRIN2AQ12879 1464 aa37.81■■■■□ 3.64
SRCAP-203ENST00000411466 IGF1RP08069 1367 aa37.78■■■■□ 3.64
SRCAP-203ENST00000411466 CLASP1Q7Z460 1538 aa37.75■■■■□ 3.63
SRCAP-203ENST00000411466 ARHGEF11O15085 1522 aa37.66■■■■□ 3.62
SRCAP-203ENST00000411466 RIMBP3CA6NJZ7 1639 aa37.65■■■■□ 3.62
SRCAP-203ENST00000411466 RIMBP3BA6NNM3 1639 aa37.65■■■■□ 3.62
SRCAP-203ENST00000411466 RIMBP3Q9UFD9 1639 aa37.65■■■■□ 3.62
SRCAP-203ENST00000411466 NUP160Q12769 1436 aa37.64■■■■□ 3.62
SRCAP-203ENST00000411466 CUL7Q14999 1698 aa37.63■■■■□ 3.61
SRCAP-203ENST00000411466 CEP170Q5SW79 1584 aa37.6■■■■□ 3.61
SRCAP-203ENST00000411466 RUSC2Q8N2Y8 1516 aa37.57■■■■□ 3.61
SRCAP-203ENST00000411466 CARMIL1Q5VZK9 1371 aa37.54■■■■□ 3.6
SRCAP-203ENST00000411466 CHIC1Q5VXU3 224 aa37.4■■■■□ 3.58
SRCAP-203ENST00000411466 ARAP1Q96P48 1450 aa37.36■■■■□ 3.57
SRCAP-203ENST00000411466 CYB5RLQ6IPT4 315 aa37.34■■■■□ 3.57
SRCAP-203ENST00000411466 SHROOM2Q13796 1616 aa37.33■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms