RNA–Protein interactions for RNA: ENST00000411328.1

RN7SKP194-201, Transcript of RNA, 7SK small nuclear pseudogene 194, humanhuman

BASIC

Gene RN7SKP194, Length 351 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP194-201ENST00000411328 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
RN7SKP194-201ENST00000411328 ABCC9O60706 1549 aa23.33■■□□□ 1.33
RN7SKP194-201ENST00000411328 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
RN7SKP194-201ENST00000411328 CCDC180Q9P1Z9 1646 aa22.52■■□□□ 1.2
RN7SKP194-201ENST00000411328 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
RN7SKP194-201ENST00000411328 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
RN7SKP194-201ENST00000411328 NACADO15069 1562 aa21.51■■□□□ 1.03
RN7SKP194-201ENST00000411328 DCAF8L2P0C7V8 631 aa21.44■■□□□ 1.02
RN7SKP194-201ENST00000411328 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
RN7SKP194-201ENST00000411328 DNAJC5Q9H3Z4 198 aa21.31■■□□□ 1
RN7SKP194-201ENST00000411328 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
RN7SKP194-201ENST00000411328 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
RN7SKP194-201ENST00000411328 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
RN7SKP194-201ENST00000411328 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
RN7SKP194-201ENST00000411328 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
RN7SKP194-201ENST00000411328 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
RN7SKP194-201ENST00000411328 SCRIBQ14160 1630 aa20.51■□□□□ 0.87
RN7SKP194-201ENST00000411328 CUX2O14529 1486 aa20.39■□□□□ 0.85
RN7SKP194-201ENST00000411328 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
RN7SKP194-201ENST00000411328 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
RN7SKP194-201ENST00000411328 ERCC6Q03468 1493 aa20.23■□□□□ 0.83
RN7SKP194-201ENST00000411328 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
RN7SKP194-201ENST00000411328 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
RN7SKP194-201ENST00000411328 NESP48681 1621 aa19.8■□□□□ 0.76
RN7SKP194-201ENST00000411328 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
RN7SKP194-201ENST00000411328 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
RN7SKP194-201ENST00000411328 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
RN7SKP194-201ENST00000411328 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
RN7SKP194-201ENST00000411328 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
RN7SKP194-201ENST00000411328 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
RN7SKP194-201ENST00000411328 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
RN7SKP194-201ENST00000411328 BAZ1BQ9UIG0 1483 aaKnown RBP19.49■□□□□ 0.71
RN7SKP194-201ENST00000411328 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
RN7SKP194-201ENST00000411328 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
RN7SKP194-201ENST00000411328 BAZ1AQ9NRL2 1556 aaPredicted RBP19.38■□□□□ 0.69
RN7SKP194-201ENST00000411328 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
RN7SKP194-201ENST00000411328 WDR62O43379 1518 aa19.28■□□□□ 0.68
RN7SKP194-201ENST00000411328 CADPSQ9ULU8 1353 aa19.27■□□□□ 0.68
RN7SKP194-201ENST00000411328 PEG3Q9GZU2 1588 aa19.25■□□□□ 0.67
RN7SKP194-201ENST00000411328 RIMBP3CA6NJZ7 1639 aa19.17■□□□□ 0.66
RN7SKP194-201ENST00000411328 RIMBP3BA6NNM3 1639 aa19.17■□□□□ 0.66
RN7SKP194-201ENST00000411328 RIMBP3Q9UFD9 1639 aa19.17■□□□□ 0.66
RN7SKP194-201ENST00000411328 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
RN7SKP194-201ENST00000411328 TRHP20396 242 aaPredicted RBP19.13■□□□□ 0.65
RN7SKP194-201ENST00000411328 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
RN7SKP194-201ENST00000411328 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
RN7SKP194-201ENST00000411328 CYB5RLQ6IPT4 315 aa19.05■□□□□ 0.64
RN7SKP194-201ENST00000411328 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
RN7SKP194-201ENST00000411328 ARHGEF11O15085 1522 aa19.03■□□□□ 0.64
RN7SKP194-201ENST00000411328 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.61
RN7SKP194-201ENST00000411328 CFTRP13569 1480 aa18.85■□□□□ 0.61
RN7SKP194-201ENST00000411328 WIZO95785 1651 aa18.82■□□□□ 0.6
RN7SKP194-201ENST00000411328 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
RN7SKP194-201ENST00000411328 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
RN7SKP194-201ENST00000411328 IFT140Q96RY7 1462 aa18.77■□□□□ 0.59
RN7SKP194-201ENST00000411328 FBLN2P98095 1184 aa18.7■□□□□ 0.58
RN7SKP194-201ENST00000411328 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
RN7SKP194-201ENST00000411328 CHD1O14646 1710 aa18.66■□□□□ 0.58
RN7SKP194-201ENST00000411328 EIF4G3O43432 1585 aaKnown RBP18.62■□□□□ 0.57
RN7SKP194-201ENST00000411328 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
RN7SKP194-201ENST00000411328 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
RN7SKP194-201ENST00000411328 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
RN7SKP194-201ENST00000411328 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
RN7SKP194-201ENST00000411328 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
RN7SKP194-201ENST00000411328 TARBP1Q13395 1621 aaKnown RBP18.43■□□□□ 0.54
RN7SKP194-201ENST00000411328 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
RN7SKP194-201ENST00000411328 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
RN7SKP194-201ENST00000411328 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
RN7SKP194-201ENST00000411328 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
RN7SKP194-201ENST00000411328 ILDR1Q86SU0 546 aaPredicted RBP18.36■□□□□ 0.53
RN7SKP194-201ENST00000411328 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
RN7SKP194-201ENST00000411328 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
RN7SKP194-201ENST00000411328 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.52
RN7SKP194-201ENST00000411328 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.52
RN7SKP194-201ENST00000411328 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
RN7SKP194-201ENST00000411328 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
RN7SKP194-201ENST00000411328 SOGA1O94964 1423 aa18.3■□□□□ 0.52
RN7SKP194-201ENST00000411328 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
RN7SKP194-201ENST00000411328 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
RN7SKP194-201ENST00000411328 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
RN7SKP194-201ENST00000411328 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
RN7SKP194-201ENST00000411328 FGD5Q6ZNL6 1462 aa18.12■□□□□ 0.49
RN7SKP194-201ENST00000411328 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
RN7SKP194-201ENST00000411328 KIF13AQ9H1H9 1805 aa18.08■□□□□ 0.48
RN7SKP194-201ENST00000411328 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
RN7SKP194-201ENST00000411328 FAM69CQ0P6D2 419 aa18.03■□□□□ 0.48
RN7SKP194-201ENST00000411328 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
RN7SKP194-201ENST00000411328 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
RN7SKP194-201ENST00000411328 NPM1P06748 294 aaKnown RBP eCLIP17.96■□□□□ 0.47
RN7SKP194-201ENST00000411328 CUX1P39880 1505 aa17.96■□□□□ 0.47
RN7SKP194-201ENST00000411328 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
RN7SKP194-201ENST00000411328 ABCC10Q5T3U5 1492 aa17.91■□□□□ 0.46
RN7SKP194-201ENST00000411328 KDM6BO15054 1643 aa17.9■□□□□ 0.46
RN7SKP194-201ENST00000411328 NUP160Q12769 1436 aa17.89■□□□□ 0.45
RN7SKP194-201ENST00000411328 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
RN7SKP194-201ENST00000411328 ABCA5Q8WWZ7 1642 aa17.86■□□□□ 0.45
RN7SKP194-201ENST00000411328 ABCA10Q8WWZ4 1543 aa17.85■□□□□ 0.45
RN7SKP194-201ENST00000411328 PRG4Q92954 1404 aaPredicted RBP17.83■□□□□ 0.45
RN7SKP194-201ENST00000411328 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
RN7SKP194-201ENST00000411328 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms