RNA–Protein interactions for RNA: ENST00000410789.1

RN7SKP188-201, Transcript of RNA, 7SK small nuclear pseudogene 188, humanhuman

BASIC

Gene RN7SKP188, Length 317 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP188-201ENST00000410789 NISCHQ9Y2I1 1504 aa17■□□□□ 0.31
RN7SKP188-201ENST00000410789 ABCC9O60706 1549 aa15.5■□□□□ 0.07
RN7SKP188-201ENST00000410789 CCDC180Q9P1Z9 1646 aa15.27■□□□□ 0.03
RN7SKP188-201ENST00000410789 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
RN7SKP188-201ENST00000410789 RB1CC1Q8TDY2 1594 aa14.55□□□□□ -0.08
RN7SKP188-201ENST00000410789 UNC13AQ9UPW8 1703 aa14.51□□□□□ -0.09
RN7SKP188-201ENST00000410789 NACADO15069 1562 aa14.42□□□□□ -0.1
RN7SKP188-201ENST00000410789 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
RN7SKP188-201ENST00000410789 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
RN7SKP188-201ENST00000410789 DCAF8L2P0C7V8 631 aa14.25□□□□□ -0.13
RN7SKP188-201ENST00000410789 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
RN7SKP188-201ENST00000410789 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
RN7SKP188-201ENST00000410789 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
RN7SKP188-201ENST00000410789 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
RN7SKP188-201ENST00000410789 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
RN7SKP188-201ENST00000410789 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
RN7SKP188-201ENST00000410789 CECR2Q9BXF3 1484 aa13.91□□□□□ -0.18
RN7SKP188-201ENST00000410789 SHROOM4Q9ULL8 1493 aa13.83□□□□□ -0.2
RN7SKP188-201ENST00000410789 DNAJC5Q9H3Z4 198 aa13.49□□□□□ -0.25
RN7SKP188-201ENST00000410789 CHIC1Q5VXU3 224 aa13.45□□□□□ -0.26
RN7SKP188-201ENST00000410789 NESP48681 1621 aa13.37□□□□□ -0.27
RN7SKP188-201ENST00000410789 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
RN7SKP188-201ENST00000410789 ATAD2BQ9ULI0 1458 aa13.35□□□□□ -0.27
RN7SKP188-201ENST00000410789 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
RN7SKP188-201ENST00000410789 CUX2O14529 1486 aa13.28□□□□□ -0.28
RN7SKP188-201ENST00000410789 HMGXB3Q12766 1538 aa13.24□□□□□ -0.29
RN7SKP188-201ENST00000410789 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
RN7SKP188-201ENST00000410789 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
RN7SKP188-201ENST00000410789 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
RN7SKP188-201ENST00000410789 SMARCA2P51531 1590 aa13.18□□□□□ -0.3
RN7SKP188-201ENST00000410789 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
RN7SKP188-201ENST00000410789 PEG3Q9GZU2 1588 aa13.17□□□□□ -0.3
RN7SKP188-201ENST00000410789 AEBP2Q6ZN18 517 aaPredicted RBP13.16□□□□□ -0.3
RN7SKP188-201ENST00000410789 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
RN7SKP188-201ENST00000410789 BAZ1AQ9NRL2 1556 aaPredicted RBP13.11□□□□□ -0.31
RN7SKP188-201ENST00000410789 WIZO95785 1651 aa13.05□□□□□ -0.32
RN7SKP188-201ENST00000410789 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
RN7SKP188-201ENST00000410789 WDR62O43379 1518 aa12.93□□□□□ -0.34
RN7SKP188-201ENST00000410789 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
RN7SKP188-201ENST00000410789 MRC2Q9UBG0 1479 aa12.89□□□□□ -0.35
RN7SKP188-201ENST00000410789 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
RN7SKP188-201ENST00000410789 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
RN7SKP188-201ENST00000410789 URB2Q14146 1524 aaKnown RBP12.82□□□□□ -0.36
RN7SKP188-201ENST00000410789 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
RN7SKP188-201ENST00000410789 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
RN7SKP188-201ENST00000410789 CFTRP13569 1480 aa12.78□□□□□ -0.36
RN7SKP188-201ENST00000410789 CEP164Q9UPV0 1460 aa12.78□□□□□ -0.36
RN7SKP188-201ENST00000410789 TOP2AP11388 1531 aaKnown RBP12.74□□□□□ -0.37
RN7SKP188-201ENST00000410789 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.38
RN7SKP188-201ENST00000410789 PRDM2Q13029 1718 aa12.69□□□□□ -0.38
RN7SKP188-201ENST00000410789 RIMBP3CA6NJZ7 1639 aa12.66□□□□□ -0.38
RN7SKP188-201ENST00000410789 RIMBP3BA6NNM3 1639 aa12.66□□□□□ -0.38
RN7SKP188-201ENST00000410789 RIMBP3Q9UFD9 1639 aa12.66□□□□□ -0.38
RN7SKP188-201ENST00000410789 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
RN7SKP188-201ENST00000410789 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
RN7SKP188-201ENST00000410789 EIF4G3O43432 1585 aaKnown RBP12.58□□□□□ -0.4
RN7SKP188-201ENST00000410789 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
RN7SKP188-201ENST00000410789 ARHGEF11O15085 1522 aa12.56□□□□□ -0.4
RN7SKP188-201ENST00000410789 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
RN7SKP188-201ENST00000410789 CHD1O14646 1710 aa12.55□□□□□ -0.4
RN7SKP188-201ENST00000410789 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.41
RN7SKP188-201ENST00000410789 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
RN7SKP188-201ENST00000410789 DNMBPQ6XZF7 1577 aa12.48□□□□□ -0.41
RN7SKP188-201ENST00000410789 ARAP1Q96P48 1450 aa12.47□□□□□ -0.41
RN7SKP188-201ENST00000410789 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
RN7SKP188-201ENST00000410789 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
RN7SKP188-201ENST00000410789 CUX1P39880 1505 aa12.39□□□□□ -0.43
RN7SKP188-201ENST00000410789 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
RN7SKP188-201ENST00000410789 CYB5RLQ6IPT4 315 aa12.38□□□□□ -0.43
RN7SKP188-201ENST00000410789 TDRD9Q8NDG6 1382 aaKnown RBP12.37□□□□□ -0.43
RN7SKP188-201ENST00000410789 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
RN7SKP188-201ENST00000410789 FGD5Q6ZNL6 1462 aa12.35□□□□□ -0.43
RN7SKP188-201ENST00000410789 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
RN7SKP188-201ENST00000410789 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
RN7SKP188-201ENST00000410789 ERCC6L2Q5T890 1561 aa12.3□□□□□ -0.44
RN7SKP188-201ENST00000410789 SOGA1O94964 1423 aa12.3□□□□□ -0.44
RN7SKP188-201ENST00000410789 PBRM1Q86U86 1689 aa12.28□□□□□ -0.44
RN7SKP188-201ENST00000410789 FBLN2P98095 1184 aa12.27□□□□□ -0.45
RN7SKP188-201ENST00000410789 ABCA5Q8WWZ7 1642 aa12.25□□□□□ -0.45
RN7SKP188-201ENST00000410789 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.46
RN7SKP188-201ENST00000410789 SYNJ2O15056 1496 aa12.2□□□□□ -0.46
RN7SKP188-201ENST00000410789 GRIN2BQ13224 1484 aa12.2□□□□□ -0.46
RN7SKP188-201ENST00000410789 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
RN7SKP188-201ENST00000410789 TRHP20396 242 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP188-201ENST00000410789 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
RN7SKP188-201ENST00000410789 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
RN7SKP188-201ENST00000410789 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
RN7SKP188-201ENST00000410789 ADAMTS12P58397 1594 aa12.14□□□□□ -0.47
RN7SKP188-201ENST00000410789 CHMP7Q8WUX9 453 aaPredicted RBP12.12□□□□□ -0.47
RN7SKP188-201ENST00000410789 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
RN7SKP188-201ENST00000410789 GRIN2AQ12879 1464 aa12.1□□□□□ -0.47
RN7SKP188-201ENST00000410789 BIVM-ERCC5R4GMW8 1640 aa12.1□□□□□ -0.47
RN7SKP188-201ENST00000410789 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
RN7SKP188-201ENST00000410789 NUP160Q12769 1436 aa12.09□□□□□ -0.47
RN7SKP188-201ENST00000410789 TOP2BQ02880 1626 aa12.07□□□□□ -0.48
RN7SKP188-201ENST00000410789 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
RN7SKP188-201ENST00000410789 RUSC2Q8N2Y8 1516 aa11.99□□□□□ -0.49
RN7SKP188-201ENST00000410789 WRNQ14191 1432 aaPredicted RBP eCLIP11.98□□□□□ -0.49
RN7SKP188-201ENST00000410789 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.49
RN7SKP188-201ENST00000410789 FHAD1B1AJZ9 1412 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms