RNA–Protein interactions for RNA: ENST00000409414.1

CYSRT1-201, Transcript of cysteine rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSRT1, Length 1,297 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSRT1-201ENST00000409414 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
CYSRT1-201ENST00000409414 CCDC180Q9P1Z9 1646 aa35.49■■■■□ 3.27
CYSRT1-201ENST00000409414 ABCC9O60706 1549 aa35.18■■■■□ 3.22
CYSRT1-201ENST00000409414 RB1CC1Q8TDY2 1594 aa33.62■■■□□ 2.97
CYSRT1-201ENST00000409414 NACADO15069 1562 aa33.46■■■□□ 2.95
CYSRT1-201ENST00000409414 DCAF8L2P0C7V8 631 aa33.31■■■□□ 2.92
CYSRT1-201ENST00000409414 MYO15BQ96JP2 1530 aa33.09■■■□□ 2.89
CYSRT1-201ENST00000409414 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
CYSRT1-201ENST00000409414 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
CYSRT1-201ENST00000409414 PABPN1Q86U42 306 aaKnown RBP eCLIP32.78■■■□□ 2.84
CYSRT1-201ENST00000409414 DCAF1Q9Y4B6 1507 aa32.77■■■□□ 2.84
CYSRT1-201ENST00000409414 DNAJC5BQ9UF47 199 aa32.72■■■□□ 2.83
CYSRT1-201ENST00000409414 BICRAQ9NZM4 1560 aa32.63■■■□□ 2.81
CYSRT1-201ENST00000409414 SCRIBQ14160 1630 aa32.35■■■□□ 2.77
CYSRT1-201ENST00000409414 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
CYSRT1-201ENST00000409414 CC2D2AQ9P2K1 1620 aa31.81■■■□□ 2.68
CYSRT1-201ENST00000409414 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
CYSRT1-201ENST00000409414 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
CYSRT1-201ENST00000409414 SMARCA4P51532 1647 aa30.89■■■□□ 2.54
CYSRT1-201ENST00000409414 NCAPD3P42695 1498 aa30.87■■■□□ 2.53
CYSRT1-201ENST00000409414 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.53
CYSRT1-201ENST00000409414 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
CYSRT1-201ENST00000409414 SMARCA2P51531 1590 aa30.76■■■□□ 2.52
CYSRT1-201ENST00000409414 HMGXB3Q12766 1538 aa30.69■■■□□ 2.5
CYSRT1-201ENST00000409414 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
CYSRT1-201ENST00000409414 MROH2BQ7Z745 1585 aa30.56■■■□□ 2.48
CYSRT1-201ENST00000409414 BAZ1BQ9UIG0 1483 aaKnown RBP30.55■■■□□ 2.48
CYSRT1-201ENST00000409414 ERCC6Q03468 1493 aa30.36■■■□□ 2.45
CYSRT1-201ENST00000409414 NESP48681 1621 aa30.31■■■□□ 2.44
CYSRT1-201ENST00000409414 WIZO95785 1651 aa30.22■■■□□ 2.43
CYSRT1-201ENST00000409414 CUX2O14529 1486 aa30.2■■■□□ 2.43
CYSRT1-201ENST00000409414 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
CYSRT1-201ENST00000409414 RSF1Q96T23 1441 aaPredicted RBP30.02■■■□□ 2.4
CYSRT1-201ENST00000409414 THOC2Q8NI27 1593 aaKnown RBP29.96■■■□□ 2.39
CYSRT1-201ENST00000409414 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
CYSRT1-201ENST00000409414 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
CYSRT1-201ENST00000409414 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
CYSRT1-201ENST00000409414 TOP2AP11388 1531 aaKnown RBP29.86■■■□□ 2.37
CYSRT1-201ENST00000409414 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
CYSRT1-201ENST00000409414 MRC2Q9UBG0 1479 aa29.69■■■□□ 2.34
CYSRT1-201ENST00000409414 CFTRP13569 1480 aa29.67■■■□□ 2.34
CYSRT1-201ENST00000409414 CEP164Q9UPV0 1460 aa29.63■■■□□ 2.33
CYSRT1-201ENST00000409414 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
CYSRT1-201ENST00000409414 WDR62O43379 1518 aa29.61■■■□□ 2.33
CYSRT1-201ENST00000409414 CCDC88BA6NC98 1476 aa29.49■■■□□ 2.31
CYSRT1-201ENST00000409414 PRDM2Q13029 1718 aa29.44■■■□□ 2.3
CYSRT1-201ENST00000409414 URB2Q14146 1524 aaKnown RBP29.36■■■□□ 2.29
CYSRT1-201ENST00000409414 TOPBP1Q92547 1522 aa29.1■■■□□ 2.25
CYSRT1-201ENST00000409414 ABCC8Q09428 1581 aa29.04■■■□□ 2.24
CYSRT1-201ENST00000409414 IFT140Q96RY7 1462 aa29.03■■■□□ 2.24
CYSRT1-201ENST00000409414 DNMBPQ6XZF7 1577 aa29.02■■■□□ 2.24
CYSRT1-201ENST00000409414 ZNF608Q9ULD9 1512 aaPredicted RBP28.94■■■□□ 2.22
CYSRT1-201ENST00000409414 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
CYSRT1-201ENST00000409414 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
CYSRT1-201ENST00000409414 EIF4G3O43432 1585 aaKnown RBP28.82■■■□□ 2.2
CYSRT1-201ENST00000409414 TARBP1Q13395 1621 aaKnown RBP28.81■■■□□ 2.2
CYSRT1-201ENST00000409414 POLA1P09884 1462 aaPredicted RBP28.81■■■□□ 2.2
CYSRT1-201ENST00000409414 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.19
CYSRT1-201ENST00000409414 CUX1P39880 1505 aa28.7■■■□□ 2.19
CYSRT1-201ENST00000409414 RAD54L2Q9Y4B4 1467 aa28.7■■■□□ 2.18
CYSRT1-201ENST00000409414 FGD5Q6ZNL6 1462 aa28.68■■■□□ 2.18
CYSRT1-201ENST00000409414 SOGA1O94964 1423 aa28.67■■■□□ 2.18
CYSRT1-201ENST00000409414 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
CYSRT1-201ENST00000409414 TDRD9Q8NDG6 1382 aaKnown RBP28.58■■■□□ 2.17
CYSRT1-201ENST00000409414 CHD1O14646 1710 aa28.57■■■□□ 2.16
CYSRT1-201ENST00000409414 WDR97A6NE52 1622 aa28.55■■■□□ 2.16
CYSRT1-201ENST00000409414 RIMBP3CA6NJZ7 1639 aa28.48■■■□□ 2.15
CYSRT1-201ENST00000409414 RIMBP3BA6NNM3 1639 aa28.48■■■□□ 2.15
CYSRT1-201ENST00000409414 RIMBP3Q9UFD9 1639 aa28.48■■■□□ 2.15
CYSRT1-201ENST00000409414 FBLN2P98095 1184 aa28.45■■■□□ 2.14
CYSRT1-201ENST00000409414 SNAPC4Q5SXM2 1469 aa28.45■■■□□ 2.14
CYSRT1-201ENST00000409414 ARHGEF11O15085 1522 aa28.41■■■□□ 2.14
CYSRT1-201ENST00000409414 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
CYSRT1-201ENST00000409414 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
CYSRT1-201ENST00000409414 ABCA10Q8WWZ4 1543 aa28.37■■■□□ 2.13
CYSRT1-201ENST00000409414 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
CYSRT1-201ENST00000409414 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
CYSRT1-201ENST00000409414 BIVM-ERCC5R4GMW8 1640 aa28.33■■■□□ 2.13
CYSRT1-201ENST00000409414 WRNQ14191 1432 aaPredicted RBP eCLIP28.33■■■□□ 2.13
CYSRT1-201ENST00000409414 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
CYSRT1-201ENST00000409414 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
CYSRT1-201ENST00000409414 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
CYSRT1-201ENST00000409414 CHMP7Q8WUX9 453 aaPredicted RBP28.3■■■□□ 2.12
CYSRT1-201ENST00000409414 SYNJ2O15056 1496 aa28.27■■■□□ 2.12
CYSRT1-201ENST00000409414 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
CYSRT1-201ENST00000409414 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
CYSRT1-201ENST00000409414 CYB5RLQ6IPT4 315 aa28.15■■■□□ 2.1
CYSRT1-201ENST00000409414 ADAMTS12P58397 1594 aa28.08■■■□□ 2.09
CYSRT1-201ENST00000409414 GRIN2AQ12879 1464 aa28.04■■■□□ 2.08
CYSRT1-201ENST00000409414 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
CYSRT1-201ENST00000409414 FHAD1B1AJZ9 1412 aa28■■■□□ 2.07
CYSRT1-201ENST00000409414 CEP170Q5SW79 1584 aa27.94■■■□□ 2.06
CYSRT1-201ENST00000409414 NUP160Q12769 1436 aa27.93■■■□□ 2.06
CYSRT1-201ENST00000409414 ERCC6L2Q5T890 1561 aa27.81■■■□□ 2.04
CYSRT1-201ENST00000409414 SHROOM2Q13796 1616 aa27.8■■■□□ 2.04
CYSRT1-201ENST00000409414 KIF27Q86VH2 1401 aa27.76■■■□□ 2.04
CYSRT1-201ENST00000409414 TRHP20396 242 aaPredicted RBP27.75■■■□□ 2.03
CYSRT1-201ENST00000409414 IGF1RP08069 1367 aa27.7■■■□□ 2.02
CYSRT1-201ENST00000409414 CUL7Q14999 1698 aa27.68■■■□□ 2.02
CYSRT1-201ENST00000409414 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms