RNA–Protein interactions for RNA: ENST00000409112.5

SP100-203, Transcript of SP100 nuclear antigen, humanhuman

TSL 1 (best) BASIC

Gene SP100, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-203ENST00000409112 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
SP100-203ENST00000409112 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
SP100-203ENST00000409112 ABCC9O60706 1549 aa25.23■■□□□ 1.63
SP100-203ENST00000409112 NACADO15069 1562 aa24.41■■□□□ 1.5
SP100-203ENST00000409112 RB1CC1Q8TDY2 1594 aa24.41■■□□□ 1.5
SP100-203ENST00000409112 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
SP100-203ENST00000409112 MYO15BQ96JP2 1530 aa24.33■■□□□ 1.49
SP100-203ENST00000409112 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
SP100-203ENST00000409112 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
SP100-203ENST00000409112 UNC13AQ9UPW8 1703 aa23.93■■□□□ 1.42
SP100-203ENST00000409112 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
SP100-203ENST00000409112 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
SP100-203ENST00000409112 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
SP100-203ENST00000409112 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
SP100-203ENST00000409112 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.27
SP100-203ENST00000409112 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
SP100-203ENST00000409112 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
SP100-203ENST00000409112 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
SP100-203ENST00000409112 SMARCA4P51532 1647 aa22.69■■□□□ 1.22
SP100-203ENST00000409112 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
SP100-203ENST00000409112 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
SP100-203ENST00000409112 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
SP100-203ENST00000409112 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
SP100-203ENST00000409112 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
SP100-203ENST00000409112 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
SP100-203ENST00000409112 HMGXB3Q12766 1538 aa22.44■■□□□ 1.18
SP100-203ENST00000409112 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
SP100-203ENST00000409112 WIZO95785 1651 aa22.29■■□□□ 1.16
SP100-203ENST00000409112 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
SP100-203ENST00000409112 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
SP100-203ENST00000409112 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
SP100-203ENST00000409112 NESP48681 1621 aa21.87■■□□□ 1.09
SP100-203ENST00000409112 CADPSQ9ULU8 1353 aa21.79■■□□□ 1.08
SP100-203ENST00000409112 CCDC88BA6NC98 1476 aa21.76■■□□□ 1.07
SP100-203ENST00000409112 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
SP100-203ENST00000409112 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
SP100-203ENST00000409112 CFTRP13569 1480 aa21.71■■□□□ 1.07
SP100-203ENST00000409112 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
SP100-203ENST00000409112 PDS5BQ9NTI5 1447 aa21.7■■□□□ 1.06
SP100-203ENST00000409112 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
SP100-203ENST00000409112 THOC2Q8NI27 1593 aaKnown RBP21.63■■□□□ 1.05
SP100-203ENST00000409112 CUX2O14529 1486 aa21.56■■□□□ 1.04
SP100-203ENST00000409112 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
SP100-203ENST00000409112 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
SP100-203ENST00000409112 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
SP100-203ENST00000409112 WDR62O43379 1518 aa21.46■■□□□ 1.03
SP100-203ENST00000409112 URB2Q14146 1524 aaKnown RBP21.35■■□□□ 1.01
SP100-203ENST00000409112 ABCC8Q09428 1581 aa21.27■■□□□ 1
SP100-203ENST00000409112 DNMBPQ6XZF7 1577 aa21.27■■□□□ 1
SP100-203ENST00000409112 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
SP100-203ENST00000409112 CUX1P39880 1505 aa21.12■□□□□ 0.97
SP100-203ENST00000409112 IFT140Q96RY7 1462 aa21.09■□□□□ 0.97
SP100-203ENST00000409112 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
SP100-203ENST00000409112 TARBP1Q13395 1621 aaKnown RBP21.05■□□□□ 0.96
SP100-203ENST00000409112 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
SP100-203ENST00000409112 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
SP100-203ENST00000409112 TOP2BQ02880 1626 aa21■□□□□ 0.95
SP100-203ENST00000409112 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
SP100-203ENST00000409112 SYNJ1O43426 1573 aa20.98■□□□□ 0.95
SP100-203ENST00000409112 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
SP100-203ENST00000409112 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
SP100-203ENST00000409112 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
SP100-203ENST00000409112 SOGA1O94964 1423 aa20.93■□□□□ 0.94
SP100-203ENST00000409112 RAD54L2Q9Y4B4 1467 aa20.93■□□□□ 0.94
SP100-203ENST00000409112 ABCA10Q8WWZ4 1543 aa20.85■□□□□ 0.93
SP100-203ENST00000409112 AQRO60306 1485 aaKnown RBP eCLIP20.82■□□□□ 0.92
SP100-203ENST00000409112 ABCA5Q8WWZ7 1642 aa20.8■□□□□ 0.92
SP100-203ENST00000409112 PBRM1Q86U86 1689 aa20.78■□□□□ 0.92
SP100-203ENST00000409112 TDRD9Q8NDG6 1382 aaKnown RBP20.77■□□□□ 0.92
SP100-203ENST00000409112 GRIN2BQ13224 1484 aa20.72■□□□□ 0.91
SP100-203ENST00000409112 GAPVD1Q14C86 1478 aa20.72■□□□□ 0.91
SP100-203ENST00000409112 CHD1O14646 1710 aa20.69■□□□□ 0.9
SP100-203ENST00000409112 MAGI1Q96QZ7 1491 aaPredicted RBP20.68■□□□□ 0.9
SP100-203ENST00000409112 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
SP100-203ENST00000409112 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
SP100-203ENST00000409112 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
SP100-203ENST00000409112 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
SP100-203ENST00000409112 SYNJ2O15056 1496 aa20.58■□□□□ 0.89
SP100-203ENST00000409112 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
SP100-203ENST00000409112 KIF27Q86VH2 1401 aa20.54■□□□□ 0.88
SP100-203ENST00000409112 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
SP100-203ENST00000409112 CUL7Q14999 1698 aa20.49■□□□□ 0.87
SP100-203ENST00000409112 FBLN2P98095 1184 aa20.46■□□□□ 0.87
SP100-203ENST00000409112 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
SP100-203ENST00000409112 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
SP100-203ENST00000409112 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
SP100-203ENST00000409112 CLASP1Q7Z460 1538 aa20.45■□□□□ 0.86
SP100-203ENST00000409112 IGF1RP08069 1367 aa20.42■□□□□ 0.86
SP100-203ENST00000409112 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
SP100-203ENST00000409112 NUP160Q12769 1436 aa20.38■□□□□ 0.85
SP100-203ENST00000409112 RUSC2Q8N2Y8 1516 aa20.35■□□□□ 0.85
SP100-203ENST00000409112 RIMBP3CA6NJZ7 1639 aa20.34■□□□□ 0.85
SP100-203ENST00000409112 RIMBP3BA6NNM3 1639 aa20.34■□□□□ 0.85
SP100-203ENST00000409112 RIMBP3Q9UFD9 1639 aa20.34■□□□□ 0.85
SP100-203ENST00000409112 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
SP100-203ENST00000409112 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
SP100-203ENST00000409112 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
SP100-203ENST00000409112 SHROOM2Q13796 1616 aa20.27■□□□□ 0.84
SP100-203ENST00000409112 EEA1Q15075 1411 aa20.25■□□□□ 0.83
SP100-203ENST00000409112 RAPGEF2Q9Y4G8 1499 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms