RNA–Protein interactions for RNA: ENST00000408742.1

MIR548N-201, Transcript of microRNA 548n, humanhuman

BASIC

Gene MIR548N, Length 75 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548N-201ENST00000408742 POTEDQ86YR6 584 aa4.39□□□□□ -1.71
MIR548N-201ENST00000408742 POTEHQ6S545 545 aa3.25□□□□□ -1.89
MIR548N-201ENST00000408742 AEBP2Q6ZN18 517 aaPredicted RBP3.17□□□□□ -1.9
MIR548N-201ENST00000408742 PLSCR2Q9NRY7 297 aa3.14□□□□□ -1.91
MIR548N-201ENST00000408742 CACNB1Q02641 598 aaPredicted RBP3.06□□□□□ -1.92
MIR548N-201ENST00000408742 CHIC1Q5VXU3 224 aa2.84□□□□□ -1.95
MIR548N-201ENST00000408742 MSH5O43196 834 aa2.83□□□□□ -1.96
MIR548N-201ENST00000408742 FOXD1Q16676 465 aa2.82□□□□□ -1.96
MIR548N-201ENST00000408742 SENP3Q9H4L4 574 aaPredicted RBP2.75□□□□□ -1.97
MIR548N-201ENST00000408742 PHF23Q9BUL5 403 aaPredicted RBP2.65□□□□□ -1.99
MIR548N-201ENST00000408742 SP7Q8TDD2 431 aaPredicted RBP2.6□□□□□ -1.99
MIR548N-201ENST00000408742 LHX8Q68G74 356 aa2.45□□□□□ -2.02
MIR548N-201ENST00000408742 POTEMA6NI47 508 aa2.37□□□□□ -2.03
MIR548N-201ENST00000408742 RNF39Q9H2S5 420 aa2.37□□□□□ -2.03
MIR548N-201ENST00000408742 PIAS4Q8N2W9 510 aaPredicted RBP2.34□□□□□ -2.03
MIR548N-201ENST00000408742 POTEGQ6S5H5 508 aa2.32□□□□□ -2.04
MIR548N-201ENST00000408742 PCDH10Q9P2E7 1040 aa2.26□□□□□ -2.05
MIR548N-201ENST00000408742 C1QBPQ07021 282 aaKnown RBP2.24□□□□□ -2.05
MIR548N-201ENST00000408742 CHRDL2Q6WN34 429 aa2.19□□□□□ -2.06
MIR548N-201ENST00000408742 HAX1O00165 279 aa2.18□□□□□ -2.06
MIR548N-201ENST00000408742 EVX2Q03828 476 aa2.14□□□□□ -2.07
MIR548N-201ENST00000408742 DCAF8L1A6NGE4 600 aa2.11□□□□□ -2.07
MIR548N-201ENST00000408742 LOC100996750A0A140TA64 210 aa2.07□□□□□ -2.08
MIR548N-201ENST00000408742 MMRN1Q13201 1228 aa2.07□□□□□ -2.08
MIR548N-201ENST00000408742 KRTAP4-6Q9BYQ5 205 aa2.07□□□□□ -2.08
MIR548N-201ENST00000408742 DMRT2Q9Y5R5 561 aa2.05□□□□□ -2.08
MIR548N-201ENST00000408742 OTUD5Q96G74 571 aa2.03□□□□□ -2.08
MIR548N-201ENST00000408742 CDAN1Q8IWY9 1227 aa2.02□□□□□ -2.09
MIR548N-201ENST00000408742 MAPK8IP2Q13387 824 aaPredicted RBP2.01□□□□□ -2.09
MIR548N-201ENST00000408742 LCE2DQ5TA82 110 aaPredicted RBP2□□□□□ -2.09
MIR548N-201ENST00000408742 GABBR2O75899 941 aa1.97□□□□□ -2.09
MIR548N-201ENST00000408742 SPNS2Q8IVW8 549 aa1.97□□□□□ -2.09
MIR548N-201ENST00000408742 PIP4P2Q8N4L2 257 aa1.96□□□□□ -2.1
MIR548N-201ENST00000408742 POTEIP0CG38 1075 aa1.95□□□□□ -2.1
MIR548N-201ENST00000408742 FAM163AQ96GL9 167 aaPredicted RBP1.95□□□□□ -2.1
MIR548N-201ENST00000408742 DSG3P32926 999 aa1.94□□□□□ -2.1
MIR548N-201ENST00000408742 PPP6R1Q9UPN7 881 aa1.92□□□□□ -2.1
MIR548N-201ENST00000408742 POTEB2H3BUK9 544 aa1.89□□□□□ -2.11
MIR548N-201ENST00000408742 KRTAP17-1Q9BYP8 105 aa1.88□□□□□ -2.11
MIR548N-201ENST00000408742 ADRA2BP18089 450 aa1.87□□□□□ -2.11
MIR548N-201ENST00000408742 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.79□□□□□ -2.12
MIR548N-201ENST00000408742 KRTAP1-3Q8IUG1 177 aa1.79□□□□□ -2.12
MIR548N-201ENST00000408742 RBM42Q9BTD8 480 aaKnown RBP1.79□□□□□ -2.12
MIR548N-201ENST00000408742 KRTAP9-8Q9BYQ0 159 aa1.78□□□□□ -2.12
MIR548N-201ENST00000408742 XP32Q5T750 250 aa1.77□□□□□ -2.13
MIR548N-201ENST00000408742 KRTAP9-6A0A140TA67 174 aa1.76□□□□□ -2.13
MIR548N-201ENST00000408742 CAPN15O75808 1086 aa1.76□□□□□ -2.13
MIR548N-201ENST00000408742 FXR2P51116 673 aaKnown RBP eCLIP1.76□□□□□ -2.13
MIR548N-201ENST00000408742 KRTAP5-3Q6L8H2 238 aa1.75□□□□□ -2.13
MIR548N-201ENST00000408742 KRTAP9-2Q9BYQ4 174 aa1.75□□□□□ -2.13
MIR548N-201ENST00000408742 SPINK5Q9NQ38 1064 aaPredicted RBP1.75□□□□□ -2.13
MIR548N-201ENST00000408742 C19orf67A6NJJ6 358 aa1.74□□□□□ -2.13
MIR548N-201ENST00000408742 KRTAP4-8Q9BYQ9 185 aa1.74□□□□□ -2.13
MIR548N-201ENST00000408742 DCBLD2Q96PD2 775 aa1.72□□□□□ -2.13
MIR548N-201ENST00000408742 SUZ12Q15022 739 aaKnown RBP1.71□□□□□ -2.14
MIR548N-201ENST00000408742 POTEJP0CG39 1038 aa1.7□□□□□ -2.14
MIR548N-201ENST00000408742 KRTAP4-8A0A0G2JLE6 195 aa1.69□□□□□ -2.14
MIR548N-201ENST00000408742 ABCB7O75027 752 aa1.68□□□□□ -2.14
MIR548N-201ENST00000408742 KRTAP9-9Q9BYP9 154 aa1.67□□□□□ -2.14
MIR548N-201ENST00000408742 KRTAP9-4Q9BYQ2 154 aa1.67□□□□□ -2.14
MIR548N-201ENST00000408742 KRTAP4-7Q9BYR0 210 aa1.65□□□□□ -2.15
MIR548N-201ENST00000408742 LCE3BQ5TA77 95 aa1.64□□□□□ -2.15
MIR548N-201ENST00000408742 PITPNM1O00562 1244 aa1.63□□□□□ -2.15
MIR548N-201ENST00000408742 ST18O60284 1047 aa1.63□□□□□ -2.15
MIR548N-201ENST00000408742 DNAJC5BQ9UF47 199 aa1.63□□□□□ -2.15
MIR548N-201ENST00000408742 REM2Q8IYK8 340 aaPredicted RBP1.62□□□□□ -2.15
MIR548N-201ENST00000408742 RNF166Q96A37 237 aaPredicted RBP1.61□□□□□ -2.15
MIR548N-201ENST00000408742 KRTAP4-2Q9BYR5 136 aa1.61□□□□□ -2.15
MIR548N-201ENST00000408742 IRX2Q9BZI1 471 aaPredicted RBP1.61□□□□□ -2.15
MIR548N-201ENST00000408742 HOXD11P31277 338 aaPredicted RBP1.6□□□□□ -2.15
MIR548N-201ENST00000408742 MAMSTRQ6ZN01 415 aa1.6□□□□□ -2.15
MIR548N-201ENST00000408742 PSMG3-AS1Q96PY0 264 aa1.6□□□□□ -2.15
MIR548N-201ENST00000408742 KRTAP3-3Q9BYR6 98 aa1.6□□□□□ -2.15
MIR548N-201ENST00000408742 KRTAP3-2Q9BYR7 98 aa1.6□□□□□ -2.15
MIR548N-201ENST00000408742 AKT1S1Q96B36 256 aa1.59□□□□□ -2.15
MIR548N-201ENST00000408742 PRKAR2AP13861 404 aaKnown RBP1.58□□□□□ -2.16
MIR548N-201ENST00000408742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP1.58□□□□□ -2.16
MIR548N-201ENST00000408742 BTBD11A6QL63 1104 aa1.57□□□□□ -2.16
MIR548N-201ENST00000408742 SCUBE2Q9NQ36 999 aa1.57□□□□□ -2.16
MIR548N-201ENST00000408742 PELP1Q8IZL8 1130 aaKnown RBP1.56□□□□□ -2.16
MIR548N-201ENST00000408742 SCAF1Q9H7N4 1312 aaKnown RBP1.56□□□□□ -2.16
MIR548N-201ENST00000408742 Q6ZNB5 142 aa1.55□□□□□ -2.16
MIR548N-201ENST00000408742 MARVELD3Q96A59 401 aa1.55□□□□□ -2.16
MIR548N-201ENST00000408742 PLA2G2EQ9NZK7 142 aa1.54□□□□□ -2.16
MIR548N-201ENST00000408742 TRHP20396 242 aaPredicted RBP1.53□□□□□ -2.16
MIR548N-201ENST00000408742 ZNF775Q96BV0 537 aaPredicted RBP1.53□□□□□ -2.16
MIR548N-201ENST00000408742 KRTAP4-9Q9BYQ8 210 aa1.52□□□□□ -2.17
MIR548N-201ENST00000408742 METRNQ9UJH8 293 aa1.51□□□□□ -2.17
MIR548N-201ENST00000408742 LCE1DQ5T752 114 aa1.5□□□□□ -2.17
MIR548N-201ENST00000408742 KRTAP4-5Q9BYR2 181 aa1.5□□□□□ -2.17
MIR548N-201ENST00000408742 POTEB3A0JP26 581 aa1.49□□□□□ -2.17
MIR548N-201ENST00000408742 LCE2BO14633 110 aa1.49□□□□□ -2.17
MIR548N-201ENST00000408742 POTEBQ6S5H4 581 aa1.49□□□□□ -2.17
MIR548N-201ENST00000408742 KRTAP4-12Q9BQ66 201 aa1.49□□□□□ -2.17
MIR548N-201ENST00000408742 GALR2O43603 387 aaPredicted RBP1.48□□□□□ -2.17
MIR548N-201ENST00000408742 MYT1LQ9UL68 1186 aa1.48□□□□□ -2.17
MIR548N-201ENST00000408742 CLCN6P51797 869 aa1.47□□□□□ -2.17
MIR548N-201ENST00000408742 CD44P16070 742 aaKnown RBP1.46□□□□□ -2.18
MIR548N-201ENST00000408742 U3KPZ7 1027 aaPredicted RBP1.45□□□□□ -2.18
MIR548N-201ENST00000408742 TMEM121BQ9BXQ6 578 aaPredicted RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms