RNA–Protein interactions for RNA: ENST00000407610.7

ZCCHC9-203, Transcript of zinc finger CCHC-type containing 9, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZCCHC9, Length 1,555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-203ENST00000407610 NISCHQ9Y2I1 1504 aa31.13■■■□□ 2.57
ZCCHC9-203ENST00000407610 CCDC180Q9P1Z9 1646 aa27.6■■■□□ 2.01
ZCCHC9-203ENST00000407610 ABCC9O60706 1549 aa27■■□□□ 1.91
ZCCHC9-203ENST00000407610 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
ZCCHC9-203ENST00000407610 NACADO15069 1562 aa26■■□□□ 1.75
ZCCHC9-203ENST00000407610 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
ZCCHC9-203ENST00000407610 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
ZCCHC9-203ENST00000407610 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
ZCCHC9-203ENST00000407610 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
ZCCHC9-203ENST00000407610 UNC13AQ9UPW8 1703 aa25.3■■□□□ 1.64
ZCCHC9-203ENST00000407610 PABPN1Q86U42 306 aaKnown RBP eCLIP25.27■■□□□ 1.64
ZCCHC9-203ENST00000407610 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
ZCCHC9-203ENST00000407610 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
ZCCHC9-203ENST00000407610 SHROOM4Q9ULL8 1493 aa24.98■■□□□ 1.59
ZCCHC9-203ENST00000407610 DNAJC5BQ9UF47 199 aa24.75■■□□□ 1.55
ZCCHC9-203ENST00000407610 EIF4G1Q04637 1599 aaKnown RBP24.53■■□□□ 1.52
ZCCHC9-203ENST00000407610 CC2D2AQ9P2K1 1620 aa24.4■■□□□ 1.5
ZCCHC9-203ENST00000407610 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
ZCCHC9-203ENST00000407610 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
ZCCHC9-203ENST00000407610 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
ZCCHC9-203ENST00000407610 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
ZCCHC9-203ENST00000407610 NCAPD3P42695 1498 aa24.01■■□□□ 1.43
ZCCHC9-203ENST00000407610 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
ZCCHC9-203ENST00000407610 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
ZCCHC9-203ENST00000407610 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
ZCCHC9-203ENST00000407610 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
ZCCHC9-203ENST00000407610 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
ZCCHC9-203ENST00000407610 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
ZCCHC9-203ENST00000407610 WIZO95785 1651 aa23.69■■□□□ 1.38
ZCCHC9-203ENST00000407610 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
ZCCHC9-203ENST00000407610 NESP48681 1621 aa23.36■■□□□ 1.33
ZCCHC9-203ENST00000407610 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
ZCCHC9-203ENST00000407610 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
ZCCHC9-203ENST00000407610 ERCC6Q03468 1493 aa23.29■■□□□ 1.32
ZCCHC9-203ENST00000407610 PDS5BQ9NTI5 1447 aa23.22■■□□□ 1.31
ZCCHC9-203ENST00000407610 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
ZCCHC9-203ENST00000407610 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
ZCCHC9-203ENST00000407610 CFTRP13569 1480 aa23.18■■□□□ 1.3
ZCCHC9-203ENST00000407610 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
ZCCHC9-203ENST00000407610 KIF21AQ7Z4S6 1674 aa23.03■■□□□ 1.28
ZCCHC9-203ENST00000407610 CUX2O14529 1486 aa23.03■■□□□ 1.28
ZCCHC9-203ENST00000407610 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
ZCCHC9-203ENST00000407610 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
ZCCHC9-203ENST00000407610 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
ZCCHC9-203ENST00000407610 MRC2Q9UBG0 1479 aa22.95■■□□□ 1.26
ZCCHC9-203ENST00000407610 PRDM2Q13029 1718 aa22.89■■□□□ 1.25
ZCCHC9-203ENST00000407610 WDR62O43379 1518 aa22.85■■□□□ 1.25
ZCCHC9-203ENST00000407610 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
ZCCHC9-203ENST00000407610 ABCC8Q09428 1581 aa22.7■■□□□ 1.22
ZCCHC9-203ENST00000407610 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
ZCCHC9-203ENST00000407610 DNMBPQ6XZF7 1577 aa22.62■■□□□ 1.21
ZCCHC9-203ENST00000407610 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
ZCCHC9-203ENST00000407610 CUX1P39880 1505 aa22.49■■□□□ 1.19
ZCCHC9-203ENST00000407610 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
ZCCHC9-203ENST00000407610 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
ZCCHC9-203ENST00000407610 SOGA1O94964 1423 aa22.41■■□□□ 1.18
ZCCHC9-203ENST00000407610 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
ZCCHC9-203ENST00000407610 ZNF608Q9ULD9 1512 aaPredicted RBP22.38■■□□□ 1.17
ZCCHC9-203ENST00000407610 TARBP1Q13395 1621 aaKnown RBP22.38■■□□□ 1.17
ZCCHC9-203ENST00000407610 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
ZCCHC9-203ENST00000407610 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
ZCCHC9-203ENST00000407610 DNAJC5Q9H3Z4 198 aa22.29■■□□□ 1.16
ZCCHC9-203ENST00000407610 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
ZCCHC9-203ENST00000407610 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
ZCCHC9-203ENST00000407610 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.16
ZCCHC9-203ENST00000407610 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
ZCCHC9-203ENST00000407610 TDRD9Q8NDG6 1382 aaKnown RBP22.26■■□□□ 1.15
ZCCHC9-203ENST00000407610 WDR97A6NE52 1622 aa22.23■■□□□ 1.15
ZCCHC9-203ENST00000407610 ABCA10Q8WWZ4 1543 aa22.22■■□□□ 1.15
ZCCHC9-203ENST00000407610 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
ZCCHC9-203ENST00000407610 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
ZCCHC9-203ENST00000407610 GRIN2BQ13224 1484 aa22.13■■□□□ 1.13
ZCCHC9-203ENST00000407610 ABCA5Q8WWZ7 1642 aa22.08■■□□□ 1.12
ZCCHC9-203ENST00000407610 SNAPC4Q5SXM2 1469 aa22.06■■□□□ 1.12
ZCCHC9-203ENST00000407610 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
ZCCHC9-203ENST00000407610 FBLN2P98095 1184 aa22.04■■□□□ 1.12
ZCCHC9-203ENST00000407610 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
ZCCHC9-203ENST00000407610 PBRM1Q86U86 1689 aa21.99■■□□□ 1.11
ZCCHC9-203ENST00000407610 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
ZCCHC9-203ENST00000407610 ERICH3Q5RHP9 1530 aa21.95■■□□□ 1.1
ZCCHC9-203ENST00000407610 KIF27Q86VH2 1401 aa21.95■■□□□ 1.1
ZCCHC9-203ENST00000407610 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
ZCCHC9-203ENST00000407610 CHD1O14646 1710 aa21.94■■□□□ 1.1
ZCCHC9-203ENST00000407610 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
ZCCHC9-203ENST00000407610 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
ZCCHC9-203ENST00000407610 IGF1RP08069 1367 aa21.86■■□□□ 1.09
ZCCHC9-203ENST00000407610 GRIN2AQ12879 1464 aa21.83■■□□□ 1.08
ZCCHC9-203ENST00000407610 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
ZCCHC9-203ENST00000407610 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
ZCCHC9-203ENST00000407610 NUP160Q12769 1436 aa21.74■■□□□ 1.07
ZCCHC9-203ENST00000407610 CUL7Q14999 1698 aa21.73■■□□□ 1.07
ZCCHC9-203ENST00000407610 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
ZCCHC9-203ENST00000407610 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
ZCCHC9-203ENST00000407610 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
ZCCHC9-203ENST00000407610 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
ZCCHC9-203ENST00000407610 RIMBP3CA6NJZ7 1639 aa21.67■■□□□ 1.06
ZCCHC9-203ENST00000407610 RIMBP3BA6NNM3 1639 aa21.67■■□□□ 1.06
ZCCHC9-203ENST00000407610 RIMBP3Q9UFD9 1639 aa21.67■■□□□ 1.06
ZCCHC9-203ENST00000407610 RAPGEF2Q9Y4G8 1499 aa21.59■■□□□ 1.05
ZCCHC9-203ENST00000407610 EEA1Q15075 1411 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms