RNA–Protein interactions for RNA: ENST00000406911.5

MTA3-204, Transcript of metastasis associated 1 family member 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MTA3, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA3-204ENST00000406911 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
MTA3-204ENST00000406911 ABCC9O60706 1549 aa26.64■■□□□ 1.85
MTA3-204ENST00000406911 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
MTA3-204ENST00000406911 DNAJC5Q9H3Z4 198 aa25.56■■□□□ 1.68
MTA3-204ENST00000406911 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.63
MTA3-204ENST00000406911 RB1CC1Q8TDY2 1594 aa24.81■■□□□ 1.56
MTA3-204ENST00000406911 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
MTA3-204ENST00000406911 CECR2Q9BXF3 1484 aa24.25■■□□□ 1.47
MTA3-204ENST00000406911 NACADO15069 1562 aa24.25■■□□□ 1.47
MTA3-204ENST00000406911 UNC13AQ9UPW8 1703 aa24.11■■□□□ 1.45
MTA3-204ENST00000406911 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
MTA3-204ENST00000406911 BICRAQ9NZM4 1560 aa24.02■■□□□ 1.44
MTA3-204ENST00000406911 CUX2O14529 1486 aa23.85■■□□□ 1.41
MTA3-204ENST00000406911 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
MTA3-204ENST00000406911 TRIM41Q8WV44 630 aa23.66■■□□□ 1.38
MTA3-204ENST00000406911 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
MTA3-204ENST00000406911 DCAF8L2P0C7V8 631 aa23.45■■□□□ 1.34
MTA3-204ENST00000406911 MYO15BQ96JP2 1530 aa23.41■■□□□ 1.34
MTA3-204ENST00000406911 ERCC6Q03468 1493 aa23.22■■□□□ 1.31
MTA3-204ENST00000406911 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
MTA3-204ENST00000406911 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
MTA3-204ENST00000406911 THOC2Q8NI27 1593 aaKnown RBP22.62■■□□□ 1.21
MTA3-204ENST00000406911 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
MTA3-204ENST00000406911 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.17
MTA3-204ENST00000406911 NESP48681 1621 aa22.36■■□□□ 1.17
MTA3-204ENST00000406911 OSCARQ8IYS5 282 aa22.34■■□□□ 1.17
MTA3-204ENST00000406911 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
MTA3-204ENST00000406911 SMARCA2P51531 1590 aa22.26■■□□□ 1.15
MTA3-204ENST00000406911 RIMBP3CA6NJZ7 1639 aa22.26■■□□□ 1.15
MTA3-204ENST00000406911 RIMBP3BA6NNM3 1639 aa22.26■■□□□ 1.15
MTA3-204ENST00000406911 RIMBP3Q9UFD9 1639 aa22.26■■□□□ 1.15
MTA3-204ENST00000406911 ZCCHC6Q5VYS8 1495 aaKnown RBP22.18■■□□□ 1.14
MTA3-204ENST00000406911 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
MTA3-204ENST00000406911 LAMC3Q9Y6N6 1575 aa22.15■■□□□ 1.14
MTA3-204ENST00000406911 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
MTA3-204ENST00000406911 ILDR1Q86SU0 546 aaPredicted RBP22.11■■□□□ 1.13
MTA3-204ENST00000406911 HMGXB3Q12766 1538 aa22.08■■□□□ 1.12
MTA3-204ENST00000406911 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
MTA3-204ENST00000406911 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
MTA3-204ENST00000406911 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
MTA3-204ENST00000406911 WDR62O43379 1518 aa21.97■■□□□ 1.11
MTA3-204ENST00000406911 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
MTA3-204ENST00000406911 CYB5RLQ6IPT4 315 aa21.83■■□□□ 1.09
MTA3-204ENST00000406911 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
MTA3-204ENST00000406911 ARAP1Q96P48 1450 aa21.66■■□□□ 1.06
MTA3-204ENST00000406911 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
MTA3-204ENST00000406911 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
MTA3-204ENST00000406911 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
MTA3-204ENST00000406911 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
MTA3-204ENST00000406911 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
MTA3-204ENST00000406911 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
MTA3-204ENST00000406911 URB2Q14146 1524 aaKnown RBP21.2■□□□□ 0.98
MTA3-204ENST00000406911 CHD1O14646 1710 aa21.2■□□□□ 0.98
MTA3-204ENST00000406911 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
MTA3-204ENST00000406911 ZNF608Q9ULD9 1512 aaPredicted RBP21.16■□□□□ 0.98
MTA3-204ENST00000406911 ERCC6L2Q5T890 1561 aa21.13■□□□□ 0.97
MTA3-204ENST00000406911 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
MTA3-204ENST00000406911 FBXO41Q8TF61 875 aa21.05■□□□□ 0.96
MTA3-204ENST00000406911 KDM4FA0A1W2PPD8 638 aa21.04■□□□□ 0.96
MTA3-204ENST00000406911 LMTK3Q96Q04 1460 aa21■□□□□ 0.95
MTA3-204ENST00000406911 CLASP1Q7Z460 1538 aa20.97■□□□□ 0.95
MTA3-204ENST00000406911 CFTRP13569 1480 aa20.96■□□□□ 0.95
MTA3-204ENST00000406911 FBLN2P98095 1184 aa20.92■□□□□ 0.94
MTA3-204ENST00000406911 SOCS7O14512 581 aa20.9■□□□□ 0.94
MTA3-204ENST00000406911 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
MTA3-204ENST00000406911 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
MTA3-204ENST00000406911 HECW2Q9P2P5 1572 aa20.85■□□□□ 0.93
MTA3-204ENST00000406911 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
MTA3-204ENST00000406911 KIF13AQ9H1H9 1805 aa20.79■□□□□ 0.92
MTA3-204ENST00000406911 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.91
MTA3-204ENST00000406911 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
MTA3-204ENST00000406911 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
MTA3-204ENST00000406911 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
MTA3-204ENST00000406911 KDM6BO15054 1643 aa20.67■□□□□ 0.9
MTA3-204ENST00000406911 TARBP1Q13395 1621 aaKnown RBP20.66■□□□□ 0.9
MTA3-204ENST00000406911 ADGRL1O94910 1474 aa20.59■□□□□ 0.89
MTA3-204ENST00000406911 CHMP7Q8WUX9 453 aaPredicted RBP20.58■□□□□ 0.88
MTA3-204ENST00000406911 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
MTA3-204ENST00000406911 SNAPC4Q5SXM2 1469 aa20.57■□□□□ 0.88
MTA3-204ENST00000406911 ILDR2Q71H61 639 aa20.56■□□□□ 0.88
MTA3-204ENST00000406911 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
MTA3-204ENST00000406911 WDR97A6NE52 1622 aa20.54■□□□□ 0.88
MTA3-204ENST00000406911 MAGI1Q96QZ7 1491 aaPredicted RBP20.53■□□□□ 0.88
MTA3-204ENST00000406911 WIZO95785 1651 aa20.5■□□□□ 0.87
MTA3-204ENST00000406911 DISP3Q9P2K9 1392 aa20.49■□□□□ 0.87
MTA3-204ENST00000406911 ABCC10Q5T3U5 1492 aa20.49■□□□□ 0.87
MTA3-204ENST00000406911 FAM69CQ0P6D2 419 aa20.46■□□□□ 0.87
MTA3-204ENST00000406911 DIP2BQ9P265 1576 aa20.39■□□□□ 0.85
MTA3-204ENST00000406911 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
MTA3-204ENST00000406911 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
MTA3-204ENST00000406911 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
MTA3-204ENST00000406911 MAPKBP1O60336 1514 aa20.34■□□□□ 0.85
MTA3-204ENST00000406911 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
MTA3-204ENST00000406911 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
MTA3-204ENST00000406911 SOGA1O94964 1423 aa20.25■□□□□ 0.83
MTA3-204ENST00000406911 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
MTA3-204ENST00000406911 SPATA31D1Q6ZQQ2 1576 aa20.24■□□□□ 0.83
MTA3-204ENST00000406911 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
MTA3-204ENST00000406911 NPM1P06748 294 aaKnown RBP eCLIP20.22■□□□□ 0.83
MTA3-204ENST00000406911 TSPOAP1O95153 1857 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms