RNA–Protein interactions for RNA: ENST00000406599.5

ESR1-204, Transcript of estrogen receptor 1, humanhuman

TSL 1 (best) BASIC

Gene ESR1, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-204ENST00000406599 NISCHQ9Y2I1 1504 aa42.02■■■■■ 4.32
ESR1-204ENST00000406599 CCDC180Q9P1Z9 1646 aa37.36■■■■□ 3.57
ESR1-204ENST00000406599 ABCC9O60706 1549 aa36.56■■■■□ 3.44
ESR1-204ENST00000406599 DCAF8L2P0C7V8 631 aa35.23■■■■□ 3.23
ESR1-204ENST00000406599 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
ESR1-204ENST00000406599 NACADO15069 1562 aa35.17■■■■□ 3.22
ESR1-204ENST00000406599 ZCCHC6Q5VYS8 1495 aaKnown RBP34.99■■■■□ 3.19
ESR1-204ENST00000406599 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
ESR1-204ENST00000406599 DCAF1Q9Y4B6 1507 aa34.8■■■■□ 3.16
ESR1-204ENST00000406599 UNC13AQ9UPW8 1703 aa34.22■■■■□ 3.07
ESR1-204ENST00000406599 PABPN1Q86U42 306 aaKnown RBP eCLIP34.18■■■■□ 3.06
ESR1-204ENST00000406599 SCRIBQ14160 1630 aa34.06■■■■□ 3.04
ESR1-204ENST00000406599 BICRAQ9NZM4 1560 aa34.02■■■■□ 3.04
ESR1-204ENST00000406599 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
ESR1-204ENST00000406599 DNAJC5BQ9UF47 199 aa33.48■■■□□ 2.95
ESR1-204ENST00000406599 EIF4G1Q04637 1599 aaKnown RBP33.19■■■□□ 2.9
ESR1-204ENST00000406599 CC2D2AQ9P2K1 1620 aa33.04■■■□□ 2.88
ESR1-204ENST00000406599 CECR2Q9BXF3 1484 aa32.88■■■□□ 2.85
ESR1-204ENST00000406599 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
ESR1-204ENST00000406599 SMARCA4P51532 1647 aa32.59■■■□□ 2.81
ESR1-204ENST00000406599 SMARCA2P51531 1590 aa32.45■■■□□ 2.79
ESR1-204ENST00000406599 NCAPD3P42695 1498 aa32.44■■■□□ 2.78
ESR1-204ENST00000406599 ATAD2BQ9ULI0 1458 aa32.43■■■□□ 2.78
ESR1-204ENST00000406599 MROH2BQ7Z745 1585 aa32.34■■■□□ 2.77
ESR1-204ENST00000406599 HMGXB3Q12766 1538 aa32.27■■■□□ 2.76
ESR1-204ENST00000406599 PEG3Q9GZU2 1588 aa32.27■■■□□ 2.76
ESR1-204ENST00000406599 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
ESR1-204ENST00000406599 RSF1Q96T23 1441 aaPredicted RBP32.01■■■□□ 2.72
ESR1-204ENST00000406599 WIZO95785 1651 aa31.97■■■□□ 2.71
ESR1-204ENST00000406599 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.67
ESR1-204ENST00000406599 ERCC6Q03468 1493 aa31.6■■■□□ 2.65
ESR1-204ENST00000406599 LAMC3Q9Y6N6 1575 aa31.59■■■□□ 2.65
ESR1-204ENST00000406599 NESP48681 1621 aa31.58■■■□□ 2.65
ESR1-204ENST00000406599 CADPSQ9ULU8 1353 aa31.53■■■□□ 2.64
ESR1-204ENST00000406599 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
ESR1-204ENST00000406599 CCDC88BA6NC98 1476 aa31.32■■■□□ 2.6
ESR1-204ENST00000406599 CFTRP13569 1480 aa31.3■■■□□ 2.6
ESR1-204ENST00000406599 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
ESR1-204ENST00000406599 CUX2O14529 1486 aa31.24■■■□□ 2.59
ESR1-204ENST00000406599 KIF21AQ7Z4S6 1674 aa31.19■■■□□ 2.58
ESR1-204ENST00000406599 FANCD2Q9BXW9 1451 aa31.14■■■□□ 2.57
ESR1-204ENST00000406599 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
ESR1-204ENST00000406599 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
ESR1-204ENST00000406599 MRC2Q9UBG0 1479 aa31.07■■■□□ 2.56
ESR1-204ENST00000406599 PRDM2Q13029 1718 aa30.98■■■□□ 2.55
ESR1-204ENST00000406599 WDR62O43379 1518 aa30.93■■■□□ 2.54
ESR1-204ENST00000406599 URB2Q14146 1524 aaKnown RBP30.77■■■□□ 2.52
ESR1-204ENST00000406599 ABCC8Q09428 1581 aa30.72■■■□□ 2.51
ESR1-204ENST00000406599 TOPBP1Q92547 1522 aa30.62■■■□□ 2.49
ESR1-204ENST00000406599 DNMBPQ6XZF7 1577 aa30.59■■■□□ 2.49
ESR1-204ENST00000406599 IFT140Q96RY7 1462 aa30.48■■■□□ 2.47
ESR1-204ENST00000406599 DNAJC5Q9H3Z4 198 aa30.38■■■□□ 2.45
ESR1-204ENST00000406599 POLA1P09884 1462 aaPredicted RBP30.35■■■□□ 2.45
ESR1-204ENST00000406599 CUX1P39880 1505 aa30.35■■■□□ 2.45
ESR1-204ENST00000406599 FGD5Q6ZNL6 1462 aa30.29■■■□□ 2.44
ESR1-204ENST00000406599 SOGA1O94964 1423 aa30.29■■■□□ 2.44
ESR1-204ENST00000406599 ZNF608Q9ULD9 1512 aaPredicted RBP30.25■■■□□ 2.43
ESR1-204ENST00000406599 WRNQ14191 1432 aaPredicted RBP eCLIP30.24■■■□□ 2.43
ESR1-204ENST00000406599 TARBP1Q13395 1621 aaKnown RBP30.23■■■□□ 2.43
ESR1-204ENST00000406599 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.43
ESR1-204ENST00000406599 EIF4G3O43432 1585 aaKnown RBP30.14■■■□□ 2.42
ESR1-204ENST00000406599 TOP2BQ02880 1626 aa30.12■■■□□ 2.41
ESR1-204ENST00000406599 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.41
ESR1-204ENST00000406599 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
ESR1-204ENST00000406599 TDRD9Q8NDG6 1382 aaKnown RBP30.09■■■□□ 2.41
ESR1-204ENST00000406599 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
ESR1-204ENST00000406599 SYNJ1O43426 1573 aa30.06■■■□□ 2.4
ESR1-204ENST00000406599 ABCA10Q8WWZ4 1543 aa30.01■■■□□ 2.39
ESR1-204ENST00000406599 OSCARQ8IYS5 282 aa30■■■□□ 2.39
ESR1-204ENST00000406599 GRIN2BQ13224 1484 aa29.93■■■□□ 2.38
ESR1-204ENST00000406599 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
ESR1-204ENST00000406599 FBLN2P98095 1184 aa29.86■■■□□ 2.37
ESR1-204ENST00000406599 SNAPC4Q5SXM2 1469 aa29.86■■■□□ 2.37
ESR1-204ENST00000406599 MAGI1Q96QZ7 1491 aaPredicted RBP29.86■■■□□ 2.37
ESR1-204ENST00000406599 ABCA5Q8WWZ7 1642 aa29.83■■■□□ 2.37
ESR1-204ENST00000406599 CHMP7Q8WUX9 453 aaPredicted RBP29.8■■■□□ 2.36
ESR1-204ENST00000406599 PBRM1Q86U86 1689 aa29.77■■■□□ 2.36
ESR1-204ENST00000406599 SYNJ2O15056 1496 aa29.74■■■□□ 2.35
ESR1-204ENST00000406599 CHD1O14646 1710 aa29.72■■■□□ 2.35
ESR1-204ENST00000406599 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
ESR1-204ENST00000406599 KIF27Q86VH2 1401 aa29.65■■■□□ 2.34
ESR1-204ENST00000406599 TRIM41Q8WV44 630 aa29.6■■■□□ 2.33
ESR1-204ENST00000406599 FHAD1B1AJZ9 1412 aa29.6■■■□□ 2.33
ESR1-204ENST00000406599 ADAMTS12P58397 1594 aa29.57■■■□□ 2.32
ESR1-204ENST00000406599 GRIN2AQ12879 1464 aa29.52■■■□□ 2.32
ESR1-204ENST00000406599 IGF1RP08069 1367 aa29.46■■■□□ 2.31
ESR1-204ENST00000406599 CLASP1Q7Z460 1538 aa29.43■■■□□ 2.3
ESR1-204ENST00000406599 ARHGEF11O15085 1522 aa29.4■■■□□ 2.3
ESR1-204ENST00000406599 CUL7Q14999 1698 aa29.39■■■□□ 2.3
ESR1-204ENST00000406599 RIMBP3CA6NJZ7 1639 aa29.38■■■□□ 2.29
ESR1-204ENST00000406599 RIMBP3BA6NNM3 1639 aa29.38■■■□□ 2.29
ESR1-204ENST00000406599 RIMBP3Q9UFD9 1639 aa29.38■■■□□ 2.29
ESR1-204ENST00000406599 NUP160Q12769 1436 aa29.37■■■□□ 2.29
ESR1-204ENST00000406599 CARMIL1Q5VZK9 1371 aa29.33■■■□□ 2.29
ESR1-204ENST00000406599 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
ESR1-204ENST00000406599 RUSC2Q8N2Y8 1516 aa29.22■■■□□ 2.27
ESR1-204ENST00000406599 CYB5RLQ6IPT4 315 aa29.21■■■□□ 2.27
ESR1-204ENST00000406599 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
ESR1-204ENST00000406599 ARAP1Q96P48 1450 aa29.15■■■□□ 2.26
ESR1-204ENST00000406599 RAPGEF2Q9Y4G8 1499 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms