RNA–Protein interactions for RNA: ENST00000405598.5

CHEK2-209, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CHEK2, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-209ENST00000405598 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
CHEK2-209ENST00000405598 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
CHEK2-209ENST00000405598 ABCC9O60706 1549 aa20.11■□□□□ 0.81
CHEK2-209ENST00000405598 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
CHEK2-209ENST00000405598 DCAF8L2P0C7V8 631 aa19.9■□□□□ 0.78
CHEK2-209ENST00000405598 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
CHEK2-209ENST00000405598 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
CHEK2-209ENST00000405598 NACADO15069 1562 aa19.48■□□□□ 0.71
CHEK2-209ENST00000405598 MYO15BQ96JP2 1530 aa19.47■□□□□ 0.71
CHEK2-209ENST00000405598 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
CHEK2-209ENST00000405598 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
CHEK2-209ENST00000405598 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
CHEK2-209ENST00000405598 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
CHEK2-209ENST00000405598 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
CHEK2-209ENST00000405598 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
CHEK2-209ENST00000405598 CECR2Q9BXF3 1484 aa18.7■□□□□ 0.58
CHEK2-209ENST00000405598 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
CHEK2-209ENST00000405598 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
CHEK2-209ENST00000405598 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
CHEK2-209ENST00000405598 SMARCA4P51532 1647 aa18.46■□□□□ 0.55
CHEK2-209ENST00000405598 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
CHEK2-209ENST00000405598 WIZO95785 1651 aa18.42■□□□□ 0.54
CHEK2-209ENST00000405598 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
CHEK2-209ENST00000405598 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
CHEK2-209ENST00000405598 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
CHEK2-209ENST00000405598 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
CHEK2-209ENST00000405598 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
CHEK2-209ENST00000405598 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
CHEK2-209ENST00000405598 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
CHEK2-209ENST00000405598 NCAPD3P42695 1498 aa17.99■□□□□ 0.47
CHEK2-209ENST00000405598 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
CHEK2-209ENST00000405598 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
CHEK2-209ENST00000405598 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
CHEK2-209ENST00000405598 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
CHEK2-209ENST00000405598 NESP48681 1621 aa17.59■□□□□ 0.41
CHEK2-209ENST00000405598 CFTRP13569 1480 aa17.57■□□□□ 0.4
CHEK2-209ENST00000405598 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
CHEK2-209ENST00000405598 PRDM2Q13029 1718 aa17.51■□□□□ 0.39
CHEK2-209ENST00000405598 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
CHEK2-209ENST00000405598 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
CHEK2-209ENST00000405598 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
CHEK2-209ENST00000405598 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
CHEK2-209ENST00000405598 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
CHEK2-209ENST00000405598 KIF21AQ7Z4S6 1674 aa17.37■□□□□ 0.37
CHEK2-209ENST00000405598 CUX1P39880 1505 aa17.34■□□□□ 0.37
CHEK2-209ENST00000405598 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
CHEK2-209ENST00000405598 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
CHEK2-209ENST00000405598 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
CHEK2-209ENST00000405598 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
CHEK2-209ENST00000405598 PDS5BQ9NTI5 1447 aa17.26■□□□□ 0.35
CHEK2-209ENST00000405598 ERCC6Q03468 1493 aa17.25■□□□□ 0.35
CHEK2-209ENST00000405598 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
CHEK2-209ENST00000405598 SOGA1O94964 1423 aa17.21■□□□□ 0.35
CHEK2-209ENST00000405598 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.35
CHEK2-209ENST00000405598 TOPBP1Q92547 1522 aa17.19■□□□□ 0.34
CHEK2-209ENST00000405598 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
CHEK2-209ENST00000405598 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
CHEK2-209ENST00000405598 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
CHEK2-209ENST00000405598 LOC105371045A0A1W2PR82 267 aa17.11■□□□□ 0.33
CHEK2-209ENST00000405598 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
CHEK2-209ENST00000405598 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
CHEK2-209ENST00000405598 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
CHEK2-209ENST00000405598 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
CHEK2-209ENST00000405598 CUX2O14529 1486 aa17.05■□□□□ 0.32
CHEK2-209ENST00000405598 WDR62O43379 1518 aa17.03■□□□□ 0.32
CHEK2-209ENST00000405598 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
CHEK2-209ENST00000405598 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
CHEK2-209ENST00000405598 CSRNP3Q8WYN3 585 aa16.95■□□□□ 0.3
CHEK2-209ENST00000405598 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
CHEK2-209ENST00000405598 EEA1Q15075 1411 aa16.94■□□□□ 0.3
CHEK2-209ENST00000405598 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
CHEK2-209ENST00000405598 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
CHEK2-209ENST00000405598 ZNF608Q9ULD9 1512 aaPredicted RBP16.89■□□□□ 0.29
CHEK2-209ENST00000405598 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
CHEK2-209ENST00000405598 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
CHEK2-209ENST00000405598 IGF1RP08069 1367 aa16.85■□□□□ 0.29
CHEK2-209ENST00000405598 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.291e-11■■■■■ 27.3
CHEK2-209ENST00000405598 KIF21BO75037 1637 aa16.84■□□□□ 0.29
CHEK2-209ENST00000405598 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
CHEK2-209ENST00000405598 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
CHEK2-209ENST00000405598 GAPVD1Q14C86 1478 aa16.82■□□□□ 0.28
CHEK2-209ENST00000405598 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
CHEK2-209ENST00000405598 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
CHEK2-209ENST00000405598 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
CHEK2-209ENST00000405598 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
CHEK2-209ENST00000405598 UBTFP17480 764 aaKnown RBP16.75■□□□□ 0.27
CHEK2-209ENST00000405598 CARMIL1Q5VZK9 1371 aa16.74■□□□□ 0.27
CHEK2-209ENST00000405598 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
CHEK2-209ENST00000405598 CUL7Q14999 1698 aa16.71■□□□□ 0.27
CHEK2-209ENST00000405598 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
CHEK2-209ENST00000405598 TNIKQ9UKE5 1360 aa16.68■□□□□ 0.26
CHEK2-209ENST00000405598 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
CHEK2-209ENST00000405598 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
CHEK2-209ENST00000405598 ADAMTS12P58397 1594 aa16.67■□□□□ 0.26
CHEK2-209ENST00000405598 CEP162Q5TB80 1403 aa16.65■□□□□ 0.26
CHEK2-209ENST00000405598 FHAD1B1AJZ9 1412 aa16.59■□□□□ 0.25
CHEK2-209ENST00000405598 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
CHEK2-209ENST00000405598 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
CHEK2-209ENST00000405598 CLIP1P30622 1438 aa16.54■□□□□ 0.24
CHEK2-209ENST00000405598 FBLN2P98095 1184 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms