RNA–Protein interactions for RNA: ENST00000405147.7

GGA1-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4 BASIC

Gene GGA1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-205ENST00000405147 NISCHQ9Y2I1 1504 aa16.82■□□□□ 0.28
GGA1-205ENST00000405147 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
GGA1-205ENST00000405147 ABCC9O60706 1549 aa15.99■□□□□ 0.15
GGA1-205ENST00000405147 DNAJC5Q9H3Z4 198 aa15.68■□□□□ 0.1
GGA1-205ENST00000405147 CCDC180Q9P1Z9 1646 aa15.15■□□□□ 0.02
GGA1-205ENST00000405147 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
GGA1-205ENST00000405147 DCAF8L2P0C7V8 631 aa14.91□□□□□ -0.02
GGA1-205ENST00000405147 RB1CC1Q8TDY2 1594 aa14.8□□□□□ -0.04
GGA1-205ENST00000405147 NACADO15069 1562 aa14.52□□□□□ -0.08
GGA1-205ENST00000405147 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
GGA1-205ENST00000405147 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
GGA1-205ENST00000405147 UNC13AQ9UPW8 1703 aa14.43□□□□□ -0.1
GGA1-205ENST00000405147 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
GGA1-205ENST00000405147 CC2D2AQ9P2K1 1620 aa14.31□□□□□ -0.12
GGA1-205ENST00000405147 CUX2O14529 1486 aa14.2□□□□□ -0.14
GGA1-205ENST00000405147 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
GGA1-205ENST00000405147 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
GGA1-205ENST00000405147 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
GGA1-205ENST00000405147 AEBP2Q6ZN18 517 aaPredicted RBP13.94□□□□□ -0.18
GGA1-205ENST00000405147 SHROOM4Q9ULL8 1493 aa13.93□□□□□ -0.18
GGA1-205ENST00000405147 ERCC6Q03468 1493 aa13.84□□□□□ -0.19
GGA1-205ENST00000405147 ZCCHC6Q5VYS8 1495 aaKnown RBP13.78□□□□□ -0.2
GGA1-205ENST00000405147 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
GGA1-205ENST00000405147 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
GGA1-205ENST00000405147 NESP48681 1621 aa13.57□□□□□ -0.24
GGA1-205ENST00000405147 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
GGA1-205ENST00000405147 THOC2Q8NI27 1593 aaKnown RBP13.43□□□□□ -0.26
GGA1-205ENST00000405147 SMARCA2P51531 1590 aa13.42□□□□□ -0.26
GGA1-205ENST00000405147 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
GGA1-205ENST00000405147 ATAD2BQ9ULI0 1458 aa13.39□□□□□ -0.27
GGA1-205ENST00000405147 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
GGA1-205ENST00000405147 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
GGA1-205ENST00000405147 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
GGA1-205ENST00000405147 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
GGA1-205ENST00000405147 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
GGA1-205ENST00000405147 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
GGA1-205ENST00000405147 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.29
GGA1-205ENST00000405147 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
GGA1-205ENST00000405147 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
GGA1-205ENST00000405147 SMARCA4P51532 1647 aa13.21□□□□□ -0.29
GGA1-205ENST00000405147 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
GGA1-205ENST00000405147 CYB5RLQ6IPT4 315 aa13.17□□□□□ -0.3
GGA1-205ENST00000405147 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
GGA1-205ENST00000405147 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
GGA1-205ENST00000405147 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
GGA1-205ENST00000405147 WDR62O43379 1518 aa13.04□□□□□ -0.32
GGA1-205ENST00000405147 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
GGA1-205ENST00000405147 CEP164Q9UPV0 1460 aa13.01□□□□□ -0.33
GGA1-205ENST00000405147 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
GGA1-205ENST00000405147 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
GGA1-205ENST00000405147 PEG3Q9GZU2 1588 aa12.95□□□□□ -0.34
GGA1-205ENST00000405147 FBLN2P98095 1184 aa12.95□□□□□ -0.34
GGA1-205ENST00000405147 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
GGA1-205ENST00000405147 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
GGA1-205ENST00000405147 WIZO95785 1651 aa12.86□□□□□ -0.35
GGA1-205ENST00000405147 LMTK3Q96Q04 1460 aa12.85□□□□□ -0.35
GGA1-205ENST00000405147 SOCS7O14512 581 aa12.82□□□□□ -0.36
GGA1-205ENST00000405147 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
GGA1-205ENST00000405147 FBXO41Q8TF61 875 aa12.78□□□□□ -0.36
GGA1-205ENST00000405147 CFTRP13569 1480 aa12.78□□□□□ -0.36
GGA1-205ENST00000405147 AQRO60306 1485 aaKnown RBP eCLIP12.74□□□□□ -0.37
GGA1-205ENST00000405147 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
GGA1-205ENST00000405147 ILDR2Q71H61 639 aa12.73□□□□□ -0.37
GGA1-205ENST00000405147 CHD1O14646 1710 aa12.68□□□□□ -0.38
GGA1-205ENST00000405147 ERCC6L2Q5T890 1561 aa12.68□□□□□ -0.38
GGA1-205ENST00000405147 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
GGA1-205ENST00000405147 RSF1Q96T23 1441 aaPredicted RBP12.66□□□□□ -0.38
GGA1-205ENST00000405147 CHMP7Q8WUX9 453 aaPredicted RBP12.65□□□□□ -0.38
GGA1-205ENST00000405147 TOPBP1Q92547 1522 aa12.64□□□□□ -0.39
GGA1-205ENST00000405147 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
GGA1-205ENST00000405147 HECW2Q9P2P5 1572 aa12.59□□□□□ -0.39
GGA1-205ENST00000405147 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
GGA1-205ENST00000405147 RAD54L2Q9Y4B4 1467 aa12.56□□□□□ -0.4
GGA1-205ENST00000405147 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
GGA1-205ENST00000405147 DISP3Q9P2K9 1392 aa12.52□□□□□ -0.41
GGA1-205ENST00000405147 SNAPC4Q5SXM2 1469 aa12.52□□□□□ -0.41
GGA1-205ENST00000405147 SOGA1O94964 1423 aa12.51□□□□□ -0.41
GGA1-205ENST00000405147 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
GGA1-205ENST00000405147 TARBP1Q13395 1621 aaKnown RBP12.5□□□□□ -0.41
GGA1-205ENST00000405147 DNMBPQ6XZF7 1577 aa12.49□□□□□ -0.41
GGA1-205ENST00000405147 GAPVD1Q14C86 1478 aa12.49□□□□□ -0.41
GGA1-205ENST00000405147 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
GGA1-205ENST00000405147 POLA1P09884 1462 aaPredicted RBP12.48□□□□□ -0.41
GGA1-205ENST00000405147 CLASP1Q7Z460 1538 aa12.46□□□□□ -0.42
GGA1-205ENST00000405147 SYNJ1O43426 1573 aa12.45□□□□□ -0.42
GGA1-205ENST00000405147 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
GGA1-205ENST00000405147 KIF13AQ9H1H9 1805 aa12.4□□□□□ -0.42
GGA1-205ENST00000405147 FAM69CQ0P6D2 419 aa12.39□□□□□ -0.43
GGA1-205ENST00000405147 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
GGA1-205ENST00000405147 FGD5Q6ZNL6 1462 aa12.37□□□□□ -0.43
GGA1-205ENST00000405147 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
GGA1-205ENST00000405147 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
GGA1-205ENST00000405147 NPM1P06748 294 aaKnown RBP eCLIP12.31□□□□□ -0.44
GGA1-205ENST00000405147 KDM6BO15054 1643 aa12.29□□□□□ -0.44
GGA1-205ENST00000405147 TTBK1Q5TCY1 1321 aaPredicted RBP12.28□□□□□ -0.44
GGA1-205ENST00000405147 CUX1P39880 1505 aa12.25□□□□□ -0.45
GGA1-205ENST00000405147 SPATA31D1Q6ZQQ2 1576 aa12.25□□□□□ -0.45
GGA1-205ENST00000405147 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
GGA1-205ENST00000405147 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
GGA1-205ENST00000405147 PRG4Q92954 1404 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms