RNA–Protein interactions for RNA: ENST00000404876.1

TCF20-203, Transcript of transcription factor 20, humanhuman

TSL 3 BASIC

Gene TCF20, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF20-203ENST00000404876 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
TCF20-203ENST00000404876 ABCC9O60706 1549 aa37.85■■■■□ 3.65
TCF20-203ENST00000404876 CCDC180Q9P1Z9 1646 aa37.07■■■■□ 3.52
TCF20-203ENST00000404876 DNAJC5BQ9UF47 199 aa36.2■■■■□ 3.39
TCF20-203ENST00000404876 RB1CC1Q8TDY2 1594 aa35.7■■■■□ 3.31
TCF20-203ENST00000404876 NACADO15069 1562 aa35.26■■■■□ 3.24
TCF20-203ENST00000404876 PABPN1Q86U42 306 aaKnown RBP eCLIP35.14■■■■□ 3.22
TCF20-203ENST00000404876 DCAF8L2P0C7V8 631 aa34.97■■■■□ 3.19
TCF20-203ENST00000404876 UNC13AQ9UPW8 1703 aa34.81■■■■□ 3.16
TCF20-203ENST00000404876 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
TCF20-203ENST00000404876 MYO15BQ96JP2 1530 aa34.51■■■■□ 3.12
TCF20-203ENST00000404876 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.06
TCF20-203ENST00000404876 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
TCF20-203ENST00000404876 CC2D2AQ9P2K1 1620 aa34.14■■■■□ 3.06
TCF20-203ENST00000404876 DNAJC5Q9H3Z4 198 aa33.88■■■■□ 3.01
TCF20-203ENST00000404876 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
TCF20-203ENST00000404876 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
TCF20-203ENST00000404876 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
TCF20-203ENST00000404876 SCRIBQ14160 1630 aa33.71■■■□□ 2.99
TCF20-203ENST00000404876 CUX2O14529 1486 aa32.99■■■□□ 2.87
TCF20-203ENST00000404876 ERCC6Q03468 1493 aa32.79■■■□□ 2.84
TCF20-203ENST00000404876 NCAPD3P42695 1498 aa32.57■■■□□ 2.8
TCF20-203ENST00000404876 ATAD2BQ9ULI0 1458 aa32.34■■■□□ 2.77
TCF20-203ENST00000404876 NESP48681 1621 aa32.26■■■□□ 2.76
TCF20-203ENST00000404876 HMGXB3Q12766 1538 aa32.23■■■□□ 2.75
TCF20-203ENST00000404876 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
TCF20-203ENST00000404876 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
TCF20-203ENST00000404876 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
TCF20-203ENST00000404876 TRIM41Q8WV44 630 aa32.07■■■□□ 2.72
TCF20-203ENST00000404876 BAZ1BQ9UIG0 1483 aaKnown RBP32■■■□□ 2.71
TCF20-203ENST00000404876 LAMC3Q9Y6N6 1575 aa31.95■■■□□ 2.71
TCF20-203ENST00000404876 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
TCF20-203ENST00000404876 PDS5BQ9NTI5 1447 aa31.83■■■□□ 2.69
TCF20-203ENST00000404876 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
TCF20-203ENST00000404876 PEG3Q9GZU2 1588 aa31.78■■■□□ 2.68
TCF20-203ENST00000404876 MRC2Q9UBG0 1479 aa31.57■■■□□ 2.64
TCF20-203ENST00000404876 CADPSQ9ULU8 1353 aa31.56■■■□□ 2.64
TCF20-203ENST00000404876 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.64
TCF20-203ENST00000404876 WDR62O43379 1518 aa31.49■■■□□ 2.63
TCF20-203ENST00000404876 OSCARQ8IYS5 282 aa31.39■■■□□ 2.62
TCF20-203ENST00000404876 CEP164Q9UPV0 1460 aa31.29■■■□□ 2.6
TCF20-203ENST00000404876 FANCD2Q9BXW9 1451 aa31.18■■■□□ 2.58
TCF20-203ENST00000404876 WIZO95785 1651 aa31.09■■■□□ 2.57
TCF20-203ENST00000404876 CFTRP13569 1480 aa31.01■■■□□ 2.55
TCF20-203ENST00000404876 RIMBP3CA6NJZ7 1639 aa30.98■■■□□ 2.55
TCF20-203ENST00000404876 RIMBP3BA6NNM3 1639 aa30.98■■■□□ 2.55
TCF20-203ENST00000404876 RIMBP3Q9UFD9 1639 aa30.98■■■□□ 2.55
TCF20-203ENST00000404876 URB2Q14146 1524 aaKnown RBP30.94■■■□□ 2.54
TCF20-203ENST00000404876 ARHGEF11O15085 1522 aa30.82■■■□□ 2.52
TCF20-203ENST00000404876 IFT140Q96RY7 1462 aa30.7■■■□□ 2.51
TCF20-203ENST00000404876 ZNF608Q9ULD9 1512 aaPredicted RBP30.69■■■□□ 2.5
TCF20-203ENST00000404876 CYB5RLQ6IPT4 315 aa30.69■■■□□ 2.5
TCF20-203ENST00000404876 TOP2AP11388 1531 aaKnown RBP30.66■■■□□ 2.5
TCF20-203ENST00000404876 TRHP20396 242 aaPredicted RBP30.63■■■□□ 2.49
TCF20-203ENST00000404876 PRDM2Q13029 1718 aa30.59■■■□□ 2.49
TCF20-203ENST00000404876 RSF1Q96T23 1441 aaPredicted RBP30.59■■■□□ 2.49
TCF20-203ENST00000404876 TOPBP1Q92547 1522 aa30.49■■■□□ 2.47
TCF20-203ENST00000404876 EIF4G3O43432 1585 aaKnown RBP30.47■■■□□ 2.47
TCF20-203ENST00000404876 ARAP1Q96P48 1450 aa30.44■■■□□ 2.46
TCF20-203ENST00000404876 ABCC8Q09428 1581 aa30.42■■■□□ 2.46
TCF20-203ENST00000404876 CHD1O14646 1710 aa30.4■■■□□ 2.46
TCF20-203ENST00000404876 FBLN2P98095 1184 aa30.36■■■□□ 2.45
TCF20-203ENST00000404876 AEBP2Q6ZN18 517 aaPredicted RBP30.36■■■□□ 2.45
TCF20-203ENST00000404876 AQRO60306 1485 aaKnown RBP eCLIP30.34■■■□□ 2.452e-7■■■■■ 33.1
TCF20-203ENST00000404876 CCDC88BA6NC98 1476 aa30.32■■■□□ 2.44
TCF20-203ENST00000404876 DNMBPQ6XZF7 1577 aa30.3■■■□□ 2.44
TCF20-203ENST00000404876 TARBP1Q13395 1621 aaKnown RBP30.25■■■□□ 2.43
TCF20-203ENST00000404876 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
TCF20-203ENST00000404876 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
TCF20-203ENST00000404876 CLASP1Q7Z460 1538 aa30.03■■■□□ 2.4
TCF20-203ENST00000404876 RAD54L2Q9Y4B4 1467 aa30.02■■■□□ 2.4
TCF20-203ENST00000404876 CHMP7Q8WUX9 453 aaPredicted RBP30.01■■■□□ 2.39
TCF20-203ENST00000404876 SOGA1O94964 1423 aa30.01■■■□□ 2.39
TCF20-203ENST00000404876 SNAPC4Q5SXM2 1469 aa30■■■□□ 2.39
TCF20-203ENST00000404876 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
TCF20-203ENST00000404876 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
TCF20-203ENST00000404876 MAGI1Q96QZ7 1491 aaPredicted RBP29.92■■■□□ 2.38
TCF20-203ENST00000404876 GRIN2BQ13224 1484 aa29.83■■■□□ 2.37
TCF20-203ENST00000404876 SYNJ2O15056 1496 aa29.82■■■□□ 2.36
TCF20-203ENST00000404876 FGD5Q6ZNL6 1462 aa29.82■■■□□ 2.36
TCF20-203ENST00000404876 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
TCF20-203ENST00000404876 CUX1P39880 1505 aa29.66■■■□□ 2.34
TCF20-203ENST00000404876 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
TCF20-203ENST00000404876 ERCC6L2Q5T890 1561 aa29.49■■■□□ 2.31
TCF20-203ENST00000404876 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.3
TCF20-203ENST00000404876 ABCA5Q8WWZ7 1642 aa29.44■■■□□ 2.3
TCF20-203ENST00000404876 GRIN2AQ12879 1464 aa29.43■■■□□ 2.3
TCF20-203ENST00000404876 CEP170Q5SW79 1584 aa29.41■■■□□ 2.3
TCF20-203ENST00000404876 NUP160Q12769 1436 aa29.37■■■□□ 2.29
TCF20-203ENST00000404876 KIF13AQ9H1H9 1805 aa29.34■■■□□ 2.29
TCF20-203ENST00000404876 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
TCF20-203ENST00000404876 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
TCF20-203ENST00000404876 FHAD1B1AJZ9 1412 aa29.22■■■□□ 2.27
TCF20-203ENST00000404876 WRNQ14191 1432 aaPredicted RBP eCLIP29.21■■■□□ 2.27
TCF20-203ENST00000404876 FAM69CQ0P6D2 419 aa29.18■■■□□ 2.26
TCF20-203ENST00000404876 PRG4Q92954 1404 aaPredicted RBP29.17■■■□□ 2.26
TCF20-203ENST00000404876 NPM1P06748 294 aaKnown RBP eCLIP29.14■■■□□ 2.26
TCF20-203ENST00000404876 ABCC10Q5T3U5 1492 aa29.14■■■□□ 2.26
TCF20-203ENST00000404876 JPH4Q96JJ6 628 aa29.11■■■□□ 2.25
TCF20-203ENST00000404876 KDM4FA0A1W2PPD8 638 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms