RNA–Protein interactions for RNA: ENST00000403259.1

HIST1H2APS3-201, Transcript of histone cluster 1 H2A pseudogene 3, humanhuman

BASIC

Gene HIST1H2APS3, Length 134 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2APS3-201ENST00000403259 DNAJC5BQ9UF47 199 aa9.23□□□□□ -0.93
HIST1H2APS3-201ENST00000403259 DNAJC5Q9H3Z4 198 aa9.02□□□□□ -0.97
HIST1H2APS3-201ENST00000403259 ABCC9O60706 1549 aa8.86□□□□□ -0.99
HIST1H2APS3-201ENST00000403259 NISCHQ9Y2I1 1504 aa8.54□□□□□ -1.04
HIST1H2APS3-201ENST00000403259 TRIM41Q8WV44 630 aa8.14□□□□□ -1.11
HIST1H2APS3-201ENST00000403259 PABPN1Q86U42 306 aaKnown RBP eCLIP8.11□□□□□ -1.11
HIST1H2APS3-201ENST00000403259 CECR2Q9BXF3 1484 aa8.07□□□□□ -1.12
HIST1H2APS3-201ENST00000403259 CCDC180Q9P1Z9 1646 aa8.03□□□□□ -1.12
HIST1H2APS3-201ENST00000403259 RB1CC1Q8TDY2 1594 aa8.01□□□□□ -1.13
HIST1H2APS3-201ENST00000403259 CC2D2AQ9P2K1 1620 aa8□□□□□ -1.13
HIST1H2APS3-201ENST00000403259 UNC13AQ9UPW8 1703 aa7.99□□□□□ -1.13
HIST1H2APS3-201ENST00000403259 CUX2O14529 1486 aa7.99□□□□□ -1.13
HIST1H2APS3-201ENST00000403259 BICRAQ9NZM4 1560 aa7.97□□□□□ -1.13
HIST1H2APS3-201ENST00000403259 ILDR1Q86SU0 546 aaPredicted RBP7.85□□□□□ -1.15
HIST1H2APS3-201ENST00000403259 AEBP2Q6ZN18 517 aaPredicted RBP7.81□□□□□ -1.16
HIST1H2APS3-201ENST00000403259 NACADO15069 1562 aa7.78□□□□□ -1.16
HIST1H2APS3-201ENST00000403259 EIF4G1Q04637 1599 aaKnown RBP7.76□□□□□ -1.17
HIST1H2APS3-201ENST00000403259 SHROOM4Q9ULL8 1493 aa7.65□□□□□ -1.18
HIST1H2APS3-201ENST00000403259 ERCC6Q03468 1493 aa7.62□□□□□ -1.19
HIST1H2APS3-201ENST00000403259 THOC2Q8NI27 1593 aaKnown RBP7.54□□□□□ -1.2
HIST1H2APS3-201ENST00000403259 RIMBP3CA6NJZ7 1639 aa7.52□□□□□ -1.2
HIST1H2APS3-201ENST00000403259 RIMBP3BA6NNM3 1639 aa7.52□□□□□ -1.2
HIST1H2APS3-201ENST00000403259 RIMBP3Q9UFD9 1639 aa7.52□□□□□ -1.2
HIST1H2APS3-201ENST00000403259 BAZ1AQ9NRL2 1556 aaPredicted RBP7.44□□□□□ -1.22
HIST1H2APS3-201ENST00000403259 MYO15BQ96JP2 1530 aa7.43□□□□□ -1.22
HIST1H2APS3-201ENST00000403259 TRHP20396 242 aaPredicted RBP7.43□□□□□ -1.22
HIST1H2APS3-201ENST00000403259 NESP48681 1621 aa7.42□□□□□ -1.22
HIST1H2APS3-201ENST00000403259 OSCARQ8IYS5 282 aa7.42□□□□□ -1.22
HIST1H2APS3-201ENST00000403259 ARHGEF11O15085 1522 aa7.39□□□□□ -1.23
HIST1H2APS3-201ENST00000403259 DCAF8L2P0C7V8 631 aa7.39□□□□□ -1.23
HIST1H2APS3-201ENST00000403259 SOCS7O14512 581 aa7.34□□□□□ -1.23
HIST1H2APS3-201ENST00000403259 LMTK3Q96Q04 1460 aa7.31□□□□□ -1.24
HIST1H2APS3-201ENST00000403259 CYB5RLQ6IPT4 315 aa7.31□□□□□ -1.24
HIST1H2APS3-201ENST00000403259 ILDR2Q71H61 639 aa7.31□□□□□ -1.24
HIST1H2APS3-201ENST00000403259 SMARCA2P51531 1590 aa7.29□□□□□ -1.24
HIST1H2APS3-201ENST00000403259 KIF21AQ7Z4S6 1674 aa7.29□□□□□ -1.24
HIST1H2APS3-201ENST00000403259 SCRIBQ14160 1630 aa7.29□□□□□ -1.24
HIST1H2APS3-201ENST00000403259 ARAP1Q96P48 1450 aa7.29□□□□□ -1.24
HIST1H2APS3-201ENST00000403259 KDM4FA0A1W2PPD8 638 aa7.24□□□□□ -1.25
HIST1H2APS3-201ENST00000403259 NCAPD3P42695 1498 aa7.24□□□□□ -1.25
HIST1H2APS3-201ENST00000403259 FBXO41Q8TF61 875 aa7.23□□□□□ -1.25
HIST1H2APS3-201ENST00000403259 WDR62O43379 1518 aa7.21□□□□□ -1.26
HIST1H2APS3-201ENST00000403259 ERCC6L2Q5T890 1561 aa7.18□□□□□ -1.26
HIST1H2APS3-201ENST00000403259 LAMC3Q9Y6N6 1575 aa7.16□□□□□ -1.26
HIST1H2APS3-201ENST00000403259 MRC2Q9UBG0 1479 aa7.14□□□□□ -1.27
HIST1H2APS3-201ENST00000403259 HECW2Q9P2P5 1572 aa7.12□□□□□ -1.27
HIST1H2APS3-201ENST00000403259 PDS5BQ9NTI5 1447 aa7.1□□□□□ -1.27
HIST1H2APS3-201ENST00000403259 HMGXB3Q12766 1538 aa7.08□□□□□ -1.28
HIST1H2APS3-201ENST00000403259 ATAD2BQ9ULI0 1458 aa7.08□□□□□ -1.28
HIST1H2APS3-201ENST00000403259 RSF1Q96T23 1441 aaPredicted RBP7.05□□□□□ -1.28
HIST1H2APS3-201ENST00000403259 DISP3Q9P2K9 1392 aa7.05□□□□□ -1.28
HIST1H2APS3-201ENST00000403259 KIF13AQ9H1H9 1805 aa7.01□□□□□ -1.29
HIST1H2APS3-201ENST00000403259 DCAF1Q9Y4B6 1507 aa7.01□□□□□ -1.29
HIST1H2APS3-201ENST00000403259 SYNJ2O15056 1496 aa7□□□□□ -1.29
HIST1H2APS3-201ENST00000403259 CHD1O14646 1710 aa6.98□□□□□ -1.29
HIST1H2APS3-201ENST00000403259 SMARCA4P51532 1647 aa6.98□□□□□ -1.29
HIST1H2APS3-201ENST00000403259 ZNF608Q9ULD9 1512 aaPredicted RBP6.97□□□□□ -1.29
HIST1H2APS3-201ENST00000403259 SPATA31D1Q6ZQQ2 1576 aa6.95□□□□□ -1.3
HIST1H2APS3-201ENST00000403259 CADPSQ9ULU8 1353 aa6.93□□□□□ -1.3
HIST1H2APS3-201ENST00000403259 ADGRL1O94910 1474 aa6.92□□□□□ -1.3
HIST1H2APS3-201ENST00000403259 URB2Q14146 1524 aaKnown RBP6.91□□□□□ -1.3
HIST1H2APS3-201ENST00000403259 ZCCHC6Q5VYS8 1495 aaKnown RBP6.91□□□□□ -1.3
HIST1H2APS3-201ENST00000403259 CLASP1Q7Z460 1538 aa6.91□□□□□ -1.3
HIST1H2APS3-201ENST00000403259 BAZ1BQ9UIG0 1483 aaKnown RBP6.9□□□□□ -1.31
HIST1H2APS3-201ENST00000403259 CEP164Q9UPV0 1460 aa6.9□□□□□ -1.31
HIST1H2APS3-201ENST00000403259 EIF4G3O43432 1585 aaKnown RBP6.86□□□□□ -1.31
HIST1H2APS3-201ENST00000403259 FANCD2Q9BXW9 1451 aa6.85□□□□□ -1.31
HIST1H2APS3-201ENST00000403259 GAPVD1Q14C86 1478 aa6.84□□□□□ -1.31
HIST1H2APS3-201ENST00000403259 KDM6BO15054 1643 aa6.83□□□□□ -1.32
HIST1H2APS3-201ENST00000403259 PEG3Q9GZU2 1588 aa6.83□□□□□ -1.32
HIST1H2APS3-201ENST00000403259 IFT140Q96RY7 1462 aa6.82□□□□□ -1.32
HIST1H2APS3-201ENST00000403259 SRCAPQ6ZRS2 3230 aa6.76□□□□□ -1.33
HIST1H2APS3-201ENST00000403259 ABCC10Q5T3U5 1492 aa6.76□□□□□ -1.33
HIST1H2APS3-201ENST00000403259 AQRO60306 1485 aaKnown RBP eCLIP6.75□□□□□ -1.33
HIST1H2APS3-201ENST00000403259 FBLN2P98095 1184 aa6.74□□□□□ -1.33
HIST1H2APS3-201ENST00000403259 CERKQ8TCT0 537 aa6.74□□□□□ -1.33
HIST1H2APS3-201ENST00000403259 DIP2BQ9P265 1576 aa6.74□□□□□ -1.33
HIST1H2APS3-201ENST00000403259 TSPOAP1O95153 1857 aa6.72□□□□□ -1.33
HIST1H2APS3-201ENST00000403259 SYNJ1O43426 1573 aa6.71□□□□□ -1.34
HIST1H2APS3-201ENST00000403259 FAM69CQ0P6D2 419 aa6.71□□□□□ -1.34
HIST1H2APS3-201ENST00000403259 TARBP1Q13395 1621 aaKnown RBP6.7□□□□□ -1.34
HIST1H2APS3-201ENST00000403259 CFTRP13569 1480 aa6.7□□□□□ -1.34
HIST1H2APS3-201ENST00000403259 COL17A1Q9UMD9 1497 aaPredicted RBP6.67□□□□□ -1.34
HIST1H2APS3-201ENST00000403259 PPRC1Q5VV67 1664 aaKnown RBP6.66□□□□□ -1.34
HIST1H2APS3-201ENST00000403259 SNAPC4Q5SXM2 1469 aa6.66□□□□□ -1.34
HIST1H2APS3-201ENST00000403259 MAPKBP1O60336 1514 aa6.66□□□□□ -1.34
HIST1H2APS3-201ENST00000403259 TOPBP1Q92547 1522 aa6.65□□□□□ -1.35
HIST1H2APS3-201ENST00000403259 PCF11O94913 1555 aaKnown RBP6.63□□□□□ -1.35
HIST1H2APS3-201ENST00000403259 TOP2BQ02880 1626 aa6.63□□□□□ -1.35
HIST1H2APS3-201ENST00000403259 MROH2BQ7Z745 1585 aa6.63□□□□□ -1.35
HIST1H2APS3-201ENST00000403259 CEP170Q5SW79 1584 aa6.6□□□□□ -1.35
HIST1H2APS3-201ENST00000403259 SHROOM2Q13796 1616 aa6.58□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 CHMP7Q8WUX9 453 aaPredicted RBP6.57□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 MAGI1Q96QZ7 1491 aaPredicted RBP6.57□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 PRDM2Q13029 1718 aa6.56□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 PTPRMP28827 1452 aa6.56□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 MED1Q15648 1581 aaPredicted RBP6.56□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 TDRD9Q8NDG6 1382 aaKnown RBP6.56□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 ADCY10Q96PN6 1610 aa6.54□□□□□ -1.36
HIST1H2APS3-201ENST00000403259 ADAMTSL3P82987 1691 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms