RNA–Protein interactions for RNA: ENST00000402731.5

CHEK2-206, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best) BASIC

Gene CHEK2, Length 1,545 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-206ENST00000402731 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
CHEK2-206ENST00000402731 NISCHQ9Y2I1 1504 aa22.8■■□□□ 1.24
CHEK2-206ENST00000402731 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
CHEK2-206ENST00000402731 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
CHEK2-206ENST00000402731 ABCC9O60706 1549 aa20.42■□□□□ 0.86
CHEK2-206ENST00000402731 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
CHEK2-206ENST00000402731 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
CHEK2-206ENST00000402731 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
CHEK2-206ENST00000402731 NACADO15069 1562 aa19.32■□□□□ 0.68
CHEK2-206ENST00000402731 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
CHEK2-206ENST00000402731 FOXD1Q16676 465 aa19.25■□□□□ 0.67
CHEK2-206ENST00000402731 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
CHEK2-206ENST00000402731 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
CHEK2-206ENST00000402731 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
CHEK2-206ENST00000402731 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
CHEK2-206ENST00000402731 POTEDQ86YR6 584 aa19.01■□□□□ 0.63
CHEK2-206ENST00000402731 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
CHEK2-206ENST00000402731 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
CHEK2-206ENST00000402731 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
CHEK2-206ENST00000402731 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
CHEK2-206ENST00000402731 SCRIBQ14160 1630 aa18.58■□□□□ 0.57
CHEK2-206ENST00000402731 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
CHEK2-206ENST00000402731 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
CHEK2-206ENST00000402731 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
CHEK2-206ENST00000402731 MSH5O43196 834 aa18.22■□□□□ 0.51
CHEK2-206ENST00000402731 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
CHEK2-206ENST00000402731 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
CHEK2-206ENST00000402731 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
CHEK2-206ENST00000402731 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
CHEK2-206ENST00000402731 SMARCA2P51531 1590 aa17.71■□□□□ 0.42
CHEK2-206ENST00000402731 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
CHEK2-206ENST00000402731 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
CHEK2-206ENST00000402731 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
CHEK2-206ENST00000402731 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
CHEK2-206ENST00000402731 CUX2O14529 1486 aa17.59■□□□□ 0.41
CHEK2-206ENST00000402731 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.4
CHEK2-206ENST00000402731 ERCC6Q03468 1493 aa17.58■□□□□ 0.4
CHEK2-206ENST00000402731 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.4
CHEK2-206ENST00000402731 NESP48681 1621 aa17.57■□□□□ 0.4
CHEK2-206ENST00000402731 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
CHEK2-206ENST00000402731 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
CHEK2-206ENST00000402731 ADRA2BP18089 450 aa17.38■□□□□ 0.37
CHEK2-206ENST00000402731 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
CHEK2-206ENST00000402731 WIZO95785 1651 aa17.35■□□□□ 0.37
CHEK2-206ENST00000402731 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
CHEK2-206ENST00000402731 PDS5BQ9NTI5 1447 aa17.32■□□□□ 0.36
CHEK2-206ENST00000402731 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
CHEK2-206ENST00000402731 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
CHEK2-206ENST00000402731 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
CHEK2-206ENST00000402731 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
CHEK2-206ENST00000402731 WDR62O43379 1518 aa17.14■□□□□ 0.33
CHEK2-206ENST00000402731 CFTRP13569 1480 aa17.13■□□□□ 0.33
CHEK2-206ENST00000402731 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
CHEK2-206ENST00000402731 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
CHEK2-206ENST00000402731 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.33
CHEK2-206ENST00000402731 URB2Q14146 1524 aaKnown RBP16.97■□□□□ 0.31
CHEK2-206ENST00000402731 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
CHEK2-206ENST00000402731 PRDM2Q13029 1718 aa16.89■□□□□ 0.29
CHEK2-206ENST00000402731 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
CHEK2-206ENST00000402731 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
CHEK2-206ENST00000402731 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
CHEK2-206ENST00000402731 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.28
CHEK2-206ENST00000402731 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
CHEK2-206ENST00000402731 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
CHEK2-206ENST00000402731 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
CHEK2-206ENST00000402731 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
CHEK2-206ENST00000402731 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
CHEK2-206ENST00000402731 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.251e-20■■■■■ 27.5
CHEK2-206ENST00000402731 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
CHEK2-206ENST00000402731 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
CHEK2-206ENST00000402731 RIMBP3BA6NNM3 1639 aa16.58■□□□□ 0.24
CHEK2-206ENST00000402731 RIMBP3Q9UFD9 1639 aa16.58■□□□□ 0.24
CHEK2-206ENST00000402731 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
CHEK2-206ENST00000402731 SOGA1O94964 1423 aa16.54■□□□□ 0.24
CHEK2-206ENST00000402731 ARHGEF11O15085 1522 aa16.52■□□□□ 0.24
CHEK2-206ENST00000402731 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
CHEK2-206ENST00000402731 CHD1O14646 1710 aa16.51■□□□□ 0.23
CHEK2-206ENST00000402731 CUX1P39880 1505 aa16.5■□□□□ 0.23
CHEK2-206ENST00000402731 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
CHEK2-206ENST00000402731 FBLN2P98095 1184 aa16.45■□□□□ 0.22
CHEK2-206ENST00000402731 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
CHEK2-206ENST00000402731 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
CHEK2-206ENST00000402731 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
CHEK2-206ENST00000402731 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
CHEK2-206ENST00000402731 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
CHEK2-206ENST00000402731 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
CHEK2-206ENST00000402731 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
CHEK2-206ENST00000402731 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
CHEK2-206ENST00000402731 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
CHEK2-206ENST00000402731 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
CHEK2-206ENST00000402731 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.2
CHEK2-206ENST00000402731 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
CHEK2-206ENST00000402731 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
CHEK2-206ENST00000402731 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
CHEK2-206ENST00000402731 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
CHEK2-206ENST00000402731 WRNQ14191 1432 aaPredicted RBP eCLIP16.23■□□□□ 0.19
CHEK2-206ENST00000402731 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
CHEK2-206ENST00000402731 BIVM-ERCC5R4GMW8 1640 aa16.22■□□□□ 0.19
CHEK2-206ENST00000402731 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
CHEK2-206ENST00000402731 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms