RNA–Protein interactions for RNA: ENST00000401611.6

NCAM1-202, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 2,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-202ENST00000401611 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
NCAM1-202ENST00000401611 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
NCAM1-202ENST00000401611 ABCC9O60706 1549 aa20.85■□□□□ 0.93
NCAM1-202ENST00000401611 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
NCAM1-202ENST00000401611 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
NCAM1-202ENST00000401611 MYO15BQ96JP2 1530 aa20.44■□□□□ 0.86
NCAM1-202ENST00000401611 NACADO15069 1562 aa20.39■□□□□ 0.85
NCAM1-202ENST00000401611 RB1CC1Q8TDY2 1594 aa20.3■□□□□ 0.84
NCAM1-202ENST00000401611 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
NCAM1-202ENST00000401611 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
NCAM1-202ENST00000401611 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
NCAM1-202ENST00000401611 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
NCAM1-202ENST00000401611 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
NCAM1-202ENST00000401611 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
NCAM1-202ENST00000401611 SLC24A1O60721 1099 aa19.29■□□□□ 0.68
NCAM1-202ENST00000401611 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
NCAM1-202ENST00000401611 EIF4G1Q04637 1599 aaKnown RBP19.11■□□□□ 0.65
NCAM1-202ENST00000401611 CECR2Q9BXF3 1484 aa19.06■□□□□ 0.64
NCAM1-202ENST00000401611 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
NCAM1-202ENST00000401611 SMARCA4P51532 1647 aa19.02■□□□□ 0.63
NCAM1-202ENST00000401611 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
NCAM1-202ENST00000401611 MROH2BQ7Z745 1585 aa18.92■□□□□ 0.62
NCAM1-202ENST00000401611 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.62
NCAM1-202ENST00000401611 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
NCAM1-202ENST00000401611 SMARCA2P51531 1590 aa18.84■□□□□ 0.61
NCAM1-202ENST00000401611 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.6
NCAM1-202ENST00000401611 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
NCAM1-202ENST00000401611 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
NCAM1-202ENST00000401611 HMGXB3Q12766 1538 aa18.75■□□□□ 0.59
NCAM1-202ENST00000401611 WIZO95785 1651 aa18.74■□□□□ 0.59
NCAM1-202ENST00000401611 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
NCAM1-202ENST00000401611 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
NCAM1-202ENST00000401611 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
NCAM1-202ENST00000401611 MYT1Q01538 1121 aa18.45■□□□□ 0.54
NCAM1-202ENST00000401611 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
NCAM1-202ENST00000401611 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
NCAM1-202ENST00000401611 PELP1Q8IZL8 1130 aaKnown RBP18.24■□□□□ 0.51
NCAM1-202ENST00000401611 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
NCAM1-202ENST00000401611 TTBK1Q5TCY1 1321 aaPredicted RBP18.22■□□□□ 0.51
NCAM1-202ENST00000401611 CFTRP13569 1480 aa18.21■□□□□ 0.51
NCAM1-202ENST00000401611 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
NCAM1-202ENST00000401611 NESP48681 1621 aa18.15■□□□□ 0.5
NCAM1-202ENST00000401611 LOC105371045A0A1W2PR82 267 aa18.09■□□□□ 0.49
NCAM1-202ENST00000401611 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.48
NCAM1-202ENST00000401611 PCGF6Q9BYE7 350 aa18.05■□□□□ 0.48
NCAM1-202ENST00000401611 HRCP23327 699 aa18.04■□□□□ 0.48
NCAM1-202ENST00000401611 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
NCAM1-202ENST00000401611 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
NCAM1-202ENST00000401611 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
NCAM1-202ENST00000401611 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
NCAM1-202ENST00000401611 DAXXQ9UER7 740 aaPredicted RBP17.93■□□□□ 0.46
NCAM1-202ENST00000401611 THOC2Q8NI27 1593 aaKnown RBP17.9■□□□□ 0.46
NCAM1-202ENST00000401611 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
NCAM1-202ENST00000401611 WDR62O43379 1518 aa17.84■□□□□ 0.45
NCAM1-202ENST00000401611 ABCC8Q09428 1581 aa17.83■□□□□ 0.44
NCAM1-202ENST00000401611 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
NCAM1-202ENST00000401611 DNMBPQ6XZF7 1577 aa17.79■□□□□ 0.44
NCAM1-202ENST00000401611 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
NCAM1-202ENST00000401611 PRKCSHP14314 528 aaPredicted RBP17.77■□□□□ 0.44
NCAM1-202ENST00000401611 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
NCAM1-202ENST00000401611 CUX2O14529 1486 aa17.75■□□□□ 0.43
NCAM1-202ENST00000401611 CUX1P39880 1505 aa17.74■□□□□ 0.43
NCAM1-202ENST00000401611 APLP2Q06481 763 aa17.74■□□□□ 0.43
NCAM1-202ENST00000401611 PPARGC1BQ86YN6 1023 aaKnown RBP17.74■□□□□ 0.43
NCAM1-202ENST00000401611 BIVM-ERCC5R4GMW8 1640 aa17.73■□□□□ 0.43
NCAM1-202ENST00000401611 WRNQ14191 1432 aaPredicted RBP eCLIP17.73■□□□□ 0.43
NCAM1-202ENST00000401611 TOP2BQ02880 1626 aa17.71■□□□□ 0.43
NCAM1-202ENST00000401611 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
NCAM1-202ENST00000401611 SYNJ1O43426 1573 aa17.68■□□□□ 0.42
NCAM1-202ENST00000401611 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
NCAM1-202ENST00000401611 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
NCAM1-202ENST00000401611 ERICH6Q7L0X2 663 aa17.61■□□□□ 0.41
NCAM1-202ENST00000401611 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
NCAM1-202ENST00000401611 IFT140Q96RY7 1462 aa17.59■□□□□ 0.41
NCAM1-202ENST00000401611 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.4
NCAM1-202ENST00000401611 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
NCAM1-202ENST00000401611 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
NCAM1-202ENST00000401611 SOGA1O94964 1423 aa17.54■□□□□ 0.4
NCAM1-202ENST00000401611 ABCA10Q8WWZ4 1543 aa17.51■□□□□ 0.39
NCAM1-202ENST00000401611 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
NCAM1-202ENST00000401611 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
NCAM1-202ENST00000401611 ABCA5Q8WWZ7 1642 aa17.42■□□□□ 0.38
NCAM1-202ENST00000401611 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
NCAM1-202ENST00000401611 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
NCAM1-202ENST00000401611 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
NCAM1-202ENST00000401611 GAPVD1Q14C86 1478 aa17.35■□□□□ 0.37
NCAM1-202ENST00000401611 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
NCAM1-202ENST00000401611 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
NCAM1-202ENST00000401611 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
NCAM1-202ENST00000401611 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
NCAM1-202ENST00000401611 EEA1Q15075 1411 aa17.27■□□□□ 0.35
NCAM1-202ENST00000401611 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.35
NCAM1-202ENST00000401611 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
NCAM1-202ENST00000401611 IGF1RP08069 1367 aa17.24■□□□□ 0.35
NCAM1-202ENST00000401611 CUL7Q14999 1698 aa17.23■□□□□ 0.35
NCAM1-202ENST00000401611 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
NCAM1-202ENST00000401611 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
NCAM1-202ENST00000401611 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
NCAM1-202ENST00000401611 FHAD1B1AJZ9 1412 aa17.18■□□□□ 0.34
NCAM1-202ENST00000401611 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms