RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
CACNA1C-220ENST00000399655 MYT1Q01538 1121 aa14.17□□□□□ -0.14
CACNA1C-220ENST00000399655 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
CACNA1C-220ENST00000399655 ERICH6Q7L0X2 663 aa13.89□□□□□ -0.19
CACNA1C-220ENST00000399655 YTHDC1Q96MU7 727 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-220ENST00000399655 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-220ENST00000399655 CENPBP07199 599 aaPredicted RBP13.24□□□□□ -0.29
CACNA1C-220ENST00000399655 DAXXQ9UER7 740 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-220ENST00000399655 NEFLP07196 543 aa13.12□□□□□ -0.31
CACNA1C-220ENST00000399655 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-220ENST00000399655 APLP2Q06481 763 aa12.96□□□□□ -0.34
CACNA1C-220ENST00000399655 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.35
CACNA1C-220ENST00000399655 DCAF8L2P0C7V8 631 aa12.81□□□□□ -0.36
CACNA1C-220ENST00000399655 CLSPNQ9HAW4 1339 aa12.77□□□□□ -0.37
CACNA1C-220ENST00000399655 GLIPR1L2Q4G1C9 344 aa12.76□□□□□ -0.37
CACNA1C-220ENST00000399655 ZNF316A6NFI3 1004 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-220ENST00000399655 ZEB1P37275 1124 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-220ENST00000399655 RANGAP1P46060 587 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-220ENST00000399655 ANP32BQ92688 251 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-220ENST00000399655 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
CACNA1C-220ENST00000399655 PCGF6Q9BYE7 350 aa12.22□□□□□ -0.45
CACNA1C-220ENST00000399655 TNNT2P45379 298 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-220ENST00000399655 SUPT5HO00267 1087 aaKnown RBP12.19□□□□□ -0.46
CACNA1C-220ENST00000399655 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-220ENST00000399655 CDK11BP21127 795 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-220ENST00000399655 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
CACNA1C-220ENST00000399655 MYT1LQ9UL68 1186 aa12.16□□□□□ -0.46
CACNA1C-220ENST00000399655 NEFMP07197 916 aa12.16□□□□□ -0.46
CACNA1C-220ENST00000399655 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
CACNA1C-220ENST00000399655 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
CACNA1C-220ENST00000399655 TRIM44Q96DX7 344 aaPredicted RBP12.02□□□□□ -0.48
CACNA1C-220ENST00000399655 ANP32AP39687 249 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-220ENST00000399655 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.5
CACNA1C-220ENST00000399655 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-220ENST00000399655 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-220ENST00000399655 SLC4A1APQ9BWU0 796 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-220ENST00000399655 CALRP27797 417 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-220ENST00000399655 UPF2Q9HAU5 1272 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-220ENST00000399655 CANXP27824 592 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-220ENST00000399655 ZNF326Q5BKZ1 582 aaKnown RBP11.77□□□□□ -0.52
CACNA1C-220ENST00000399655 ANP32EQ9BTT0 268 aa11.77□□□□□ -0.53
CACNA1C-220ENST00000399655 L1TD1Q5T7N2 865 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-220ENST00000399655 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
CACNA1C-220ENST00000399655 PTMSP20962 102 aa11.62□□□□□ -0.55
CACNA1C-220ENST00000399655 SLC24A1O60721 1099 aa11.6□□□□□ -0.55
CACNA1C-220ENST00000399655 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-220ENST00000399655 GOLGA6L6A8MZA4 724 aa11.6□□□□□ -0.55
CACNA1C-220ENST00000399655 NRDCO43847 1150 aa11.59□□□□□ -0.55
CACNA1C-220ENST00000399655 GOLGA6L22H0YM25 854 aa11.57□□□□□ -0.56
CACNA1C-220ENST00000399655 CHAF1AQ13111 956 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-220ENST00000399655 ERICH6BQ5W0A0 696 aa11.54□□□□□ -0.56
CACNA1C-220ENST00000399655 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
CACNA1C-220ENST00000399655 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-220ENST00000399655 HRCP23327 699 aa11.51□□□□□ -0.57
CACNA1C-220ENST00000399655 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-220ENST00000399655 ANP32CO43423 234 aa11.49□□□□□ -0.57
CACNA1C-220ENST00000399655 TNNT3P45378 269 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-220ENST00000399655 PTMAP06454 111 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-220ENST00000399655 SHROOM4Q9ULL8 1493 aa11.47□□□□□ -0.57
CACNA1C-220ENST00000399655 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
CACNA1C-220ENST00000399655 NPM2Q86SE8 214 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-220ENST00000399655 CNGB1Q14028 1251 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-220ENST00000399655 DIEXFQ68CQ4 756 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-220ENST00000399655 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
CACNA1C-220ENST00000399655 BECN1Q14457 450 aa11.45□□□□□ -0.58
CACNA1C-220ENST00000399655 SETQ01105 290 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-220ENST00000399655 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.41□□□□□ -0.58
CACNA1C-220ENST00000399655 PNNQ9H307 717 aaKnown RBP11.4□□□□□ -0.58
CACNA1C-220ENST00000399655 CHIC1Q5VXU3 224 aa11.39□□□□□ -0.59
CACNA1C-220ENST00000399655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.39□□□□□ -0.59
CACNA1C-220ENST00000399655 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-220ENST00000399655 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
CACNA1C-220ENST00000399655 NAP1L5Q96NT1 182 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-220ENST00000399655 MYH16Q9H6N6 1097 aa11.38□□□□□ -0.59
CACNA1C-220ENST00000399655 KIAA2012Q0VF49 1180 aa11.37□□□□□ -0.59
CACNA1C-220ENST00000399655 BCANQ96GW7 911 aa11.37□□□□□ -0.59
CACNA1C-220ENST00000399655 NOC3LQ8WTT2 800 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-220ENST00000399655 GOLGA6L1Q8N7Z2 621 aa11.34□□□□□ -0.59
CACNA1C-220ENST00000399655 GOLGA6L4A6NEF3 574 aa11.34□□□□□ -0.59
CACNA1C-220ENST00000399655 STK11IPQ8N1F8 1099 aa11.33□□□□□ -0.6
CACNA1C-220ENST00000399655 ARXQ96QS3 562 aa11.33□□□□□ -0.6
CACNA1C-220ENST00000399655 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
CACNA1C-220ENST00000399655 NBR1Q14596 966 aa11.31□□□□□ -0.6
CACNA1C-220ENST00000399655 A0A0U1RQG5 324 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-220ENST00000399655 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-220ENST00000399655 PRM3Q9NNZ6 103 aa11.28□□□□□ -0.6
CACNA1C-220ENST00000399655 CASC1Q6TDU7 716 aa11.28□□□□□ -0.6
CACNA1C-220ENST00000399655 ITGAEP38570 1179 aa11.27□□□□□ -0.61
CACNA1C-220ENST00000399655 MSNP26038 577 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-220ENST00000399655 RRP12Q5JTH9 1297 aaKnown RBP11.21□□□□□ -0.62
CACNA1C-220ENST00000399655 ARID4BQ4LE39 1312 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-220ENST00000399655 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-220ENST00000399655 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-220ENST00000399655 PPM1GO15355 546 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-220ENST00000399655 CLSTN1O94985 981 aa11.15□□□□□ -0.62
CACNA1C-220ENST00000399655 NEFHP12036 1026 aa11.15□□□□□ -0.63
CACNA1C-220ENST00000399655 CCDC136Q96JN2 1154 aa11.15□□□□□ -0.63
CACNA1C-220ENST00000399655 APPP05067 770 aa11.14□□□□□ -0.63
CACNA1C-220ENST00000399655 HMMRO75330 724 aa11.14□□□□□ -0.63
CACNA1C-220ENST00000399655 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms