RNA–Protein interactions for RNA: ENST00000399201.5

SETD4-202, Transcript of SET domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene SETD4, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD4-202ENST00000399201 NISCHQ9Y2I1 1504 aa27.49■■□□□ 1.99
SETD4-202ENST00000399201 ABCC9O60706 1549 aa25.07■■□□□ 1.6
SETD4-202ENST00000399201 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
SETD4-202ENST00000399201 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
SETD4-202ENST00000399201 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
SETD4-202ENST00000399201 NACADO15069 1562 aa23.6■■□□□ 1.37
SETD4-202ENST00000399201 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.33
SETD4-202ENST00000399201 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
SETD4-202ENST00000399201 PABPN1Q86U42 306 aaKnown RBP eCLIP23.23■■□□□ 1.31
SETD4-202ENST00000399201 MYO15BQ96JP2 1530 aa23.17■■□□□ 1.3
SETD4-202ENST00000399201 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
SETD4-202ENST00000399201 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
SETD4-202ENST00000399201 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
SETD4-202ENST00000399201 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
SETD4-202ENST00000399201 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
SETD4-202ENST00000399201 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
SETD4-202ENST00000399201 SCRIBQ14160 1630 aa22.6■■□□□ 1.21
SETD4-202ENST00000399201 EIF4G1Q04637 1599 aaKnown RBP22.56■■□□□ 1.2
SETD4-202ENST00000399201 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
SETD4-202ENST00000399201 CUX2O14529 1486 aa21.83■■□□□ 1.08
SETD4-202ENST00000399201 ERCC6Q03468 1493 aa21.77■■□□□ 1.07
SETD4-202ENST00000399201 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
SETD4-202ENST00000399201 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
SETD4-202ENST00000399201 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
SETD4-202ENST00000399201 HMGXB3Q12766 1538 aa21.59■■□□□ 1.05
SETD4-202ENST00000399201 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
SETD4-202ENST00000399201 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
SETD4-202ENST00000399201 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
SETD4-202ENST00000399201 NESP48681 1621 aa21.41■■□□□ 1.02
SETD4-202ENST00000399201 LAMC3Q9Y6N6 1575 aa21.36■■□□□ 1.01
SETD4-202ENST00000399201 THOC2Q8NI27 1593 aaKnown RBP21.34■■□□□ 1.01
SETD4-202ENST00000399201 PEG3Q9GZU2 1588 aa21.34■■□□□ 1.01
SETD4-202ENST00000399201 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
SETD4-202ENST00000399201 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
SETD4-202ENST00000399201 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.97
SETD4-202ENST00000399201 CADPSQ9ULU8 1353 aa21.04■□□□□ 0.96
SETD4-202ENST00000399201 MRC2Q9UBG0 1479 aa21.04■□□□□ 0.96
SETD4-202ENST00000399201 WDR62O43379 1518 aa20.99■□□□□ 0.95
SETD4-202ENST00000399201 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
SETD4-202ENST00000399201 WIZO95785 1651 aa20.92■□□□□ 0.94
SETD4-202ENST00000399201 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
SETD4-202ENST00000399201 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
SETD4-202ENST00000399201 OSCARQ8IYS5 282 aa20.74■□□□□ 0.91
SETD4-202ENST00000399201 CFTRP13569 1480 aa20.74■□□□□ 0.91
SETD4-202ENST00000399201 PRDM2Q13029 1718 aa20.68■□□□□ 0.9
SETD4-202ENST00000399201 TOP2AP11388 1531 aaKnown RBP20.66■□□□□ 0.9
SETD4-202ENST00000399201 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
SETD4-202ENST00000399201 RSF1Q96T23 1441 aaPredicted RBP20.58■□□□□ 0.88
SETD4-202ENST00000399201 RIMBP3CA6NJZ7 1639 aa20.51■□□□□ 0.87
SETD4-202ENST00000399201 RIMBP3BA6NNM3 1639 aa20.51■□□□□ 0.87
SETD4-202ENST00000399201 RIMBP3Q9UFD9 1639 aa20.51■□□□□ 0.87
SETD4-202ENST00000399201 IFT140Q96RY7 1462 aa20.5■□□□□ 0.87
SETD4-202ENST00000399201 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
SETD4-202ENST00000399201 ARHGEF11O15085 1522 aa20.4■□□□□ 0.86
SETD4-202ENST00000399201 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
SETD4-202ENST00000399201 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
SETD4-202ENST00000399201 EIF4G3O43432 1585 aaKnown RBP20.37■□□□□ 0.85
SETD4-202ENST00000399201 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
SETD4-202ENST00000399201 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
SETD4-202ENST00000399201 CHD1O14646 1710 aa20.3■□□□□ 0.84
SETD4-202ENST00000399201 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
SETD4-202ENST00000399201 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
SETD4-202ENST00000399201 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.823e-7■■■■□ 24
SETD4-202ENST00000399201 FBLN2P98095 1184 aa20.17■□□□□ 0.82
SETD4-202ENST00000399201 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
SETD4-202ENST00000399201 POLA1P09884 1462 aaPredicted RBP20.14■□□□□ 0.81
SETD4-202ENST00000399201 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
SETD4-202ENST00000399201 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
SETD4-202ENST00000399201 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
SETD4-202ENST00000399201 SOGA1O94964 1423 aa20.06■□□□□ 0.8
SETD4-202ENST00000399201 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
SETD4-202ENST00000399201 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
SETD4-202ENST00000399201 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
SETD4-202ENST00000399201 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
SETD4-202ENST00000399201 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
SETD4-202ENST00000399201 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
SETD4-202ENST00000399201 CLASP1Q7Z460 1538 aa20■□□□□ 0.79
SETD4-202ENST00000399201 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
SETD4-202ENST00000399201 GRIN2BQ13224 1484 aa19.95■□□□□ 0.78
SETD4-202ENST00000399201 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
SETD4-202ENST00000399201 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
SETD4-202ENST00000399201 CUX1P39880 1505 aa19.89■□□□□ 0.77
SETD4-202ENST00000399201 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
SETD4-202ENST00000399201 GAPVD1Q14C86 1478 aa19.84■□□□□ 0.77
SETD4-202ENST00000399201 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.76
SETD4-202ENST00000399201 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
SETD4-202ENST00000399201 GRIN2AQ12879 1464 aa19.68■□□□□ 0.74
SETD4-202ENST00000399201 ADAMTS12P58397 1594 aa19.65■□□□□ 0.74
SETD4-202ENST00000399201 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
SETD4-202ENST00000399201 CEP170Q5SW79 1584 aa19.62■□□□□ 0.73
SETD4-202ENST00000399201 NUP160Q12769 1436 aa19.6■□□□□ 0.73
SETD4-202ENST00000399201 SHROOM2Q13796 1616 aa19.59■□□□□ 0.73
SETD4-202ENST00000399201 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
SETD4-202ENST00000399201 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.73
SETD4-202ENST00000399201 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.72
SETD4-202ENST00000399201 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
SETD4-202ENST00000399201 ERICH3Q5RHP9 1530 aa19.55■□□□□ 0.72
SETD4-202ENST00000399201 KIF13AQ9H1H9 1805 aa19.53■□□□□ 0.72
SETD4-202ENST00000399201 SUPT5HO00267 1087 aaKnown RBP19.46■□□□□ 0.71
SETD4-202ENST00000399201 PRG4Q92954 1404 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms