RNA–Protein interactions for RNA: ENST00000399093.2

AC007952.2-202, humanhuman

TSL 1 (best) BASIC

Gene AC007952.2, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007952.2-202ENST00000399093 NISCHQ9Y2I1 1504 aa43.05■■■■■ 4.48
AC007952.2-202ENST00000399093 CCDC180Q9P1Z9 1646 aa37.94■■■■□ 3.66
AC007952.2-202ENST00000399093 ABCC9O60706 1549 aa36.28■■■■□ 3.4
AC007952.2-202ENST00000399093 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
AC007952.2-202ENST00000399093 DCAF1Q9Y4B6 1507 aa35.64■■■■□ 3.3
AC007952.2-202ENST00000399093 DCAF8L2P0C7V8 631 aa35.55■■■■□ 3.28
AC007952.2-202ENST00000399093 MYO15BQ96JP2 1530 aa35.45■■■■□ 3.27
AC007952.2-202ENST00000399093 NACADO15069 1562 aa35.41■■■■□ 3.26
AC007952.2-202ENST00000399093 RB1CC1Q8TDY2 1594 aa35.26■■■■□ 3.24
AC007952.2-202ENST00000399093 SCRIBQ14160 1630 aa34.71■■■■□ 3.15
AC007952.2-202ENST00000399093 UNC13AQ9UPW8 1703 aa34.62■■■■□ 3.13
AC007952.2-202ENST00000399093 SHROOM4Q9ULL8 1493 aa34.55■■■■□ 3.12
AC007952.2-202ENST00000399093 BICRAQ9NZM4 1560 aa34.22■■■■□ 3.07
AC007952.2-202ENST00000399093 PABPN1Q86U42 306 aaKnown RBP eCLIP34.01■■■■□ 3.03
AC007952.2-202ENST00000399093 CECR2Q9BXF3 1484 aa33.46■■■□□ 2.95
AC007952.2-202ENST00000399093 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
AC007952.2-202ENST00000399093 SMARCA4P51532 1647 aa33.27■■■□□ 2.92
AC007952.2-202ENST00000399093 MROH2BQ7Z745 1585 aa33.22■■■□□ 2.91
AC007952.2-202ENST00000399093 EIF4G1Q04637 1599 aaKnown RBP33.21■■■□□ 2.91
AC007952.2-202ENST00000399093 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
AC007952.2-202ENST00000399093 WIZO95785 1651 aa32.95■■■□□ 2.87
AC007952.2-202ENST00000399093 SUPT5HO00267 1087 aaKnown RBP32.9■■■□□ 2.86
AC007952.2-202ENST00000399093 PEG3Q9GZU2 1588 aa32.9■■■□□ 2.86
AC007952.2-202ENST00000399093 CC2D2AQ9P2K1 1620 aa32.88■■■□□ 2.85
AC007952.2-202ENST00000399093 SMARCA2P51531 1590 aa32.82■■■□□ 2.84
AC007952.2-202ENST00000399093 ATAD2BQ9ULI0 1458 aa32.81■■■□□ 2.84
AC007952.2-202ENST00000399093 NCAPD3P42695 1498 aa32.64■■■□□ 2.82
AC007952.2-202ENST00000399093 TOP2AP11388 1531 aaKnown RBP32.61■■■□□ 2.81
AC007952.2-202ENST00000399093 HMGXB3Q12766 1538 aa32.61■■■□□ 2.81
AC007952.2-202ENST00000399093 BAZ1BQ9UIG0 1483 aaKnown RBP32.6■■■□□ 2.81
AC007952.2-202ENST00000399093 DNAJC5BQ9UF47 199 aa32.49■■■□□ 2.79
AC007952.2-202ENST00000399093 CCDC88BA6NC98 1476 aa32.2■■■□□ 2.75
AC007952.2-202ENST00000399093 CFTRP13569 1480 aa31.74■■■□□ 2.67
AC007952.2-202ENST00000399093 CADPSQ9ULU8 1353 aa31.72■■■□□ 2.67
AC007952.2-202ENST00000399093 PRDM2Q13029 1718 aa31.72■■■□□ 2.67
AC007952.2-202ENST00000399093 LAMC3Q9Y6N6 1575 aa31.68■■■□□ 2.66
AC007952.2-202ENST00000399093 NESP48681 1621 aa31.67■■■□□ 2.66
AC007952.2-202ENST00000399093 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
AC007952.2-202ENST00000399093 KIF21AQ7Z4S6 1674 aa31.39■■■□□ 2.62
AC007952.2-202ENST00000399093 PDS5BQ9NTI5 1447 aa31.38■■■□□ 2.61
AC007952.2-202ENST00000399093 ABCC8Q09428 1581 aa31.34■■■□□ 2.61
AC007952.2-202ENST00000399093 CEP164Q9UPV0 1460 aa31.28■■■□□ 2.6
AC007952.2-202ENST00000399093 CHIC1Q5VXU3 224 aa31.21■■■□□ 2.59
AC007952.2-202ENST00000399093 WRNQ14191 1432 aaPredicted RBP eCLIP31.19■■■□□ 2.58
AC007952.2-202ENST00000399093 ERCC6Q03468 1493 aa31.16■■■□□ 2.58
AC007952.2-202ENST00000399093 SYNJ1O43426 1573 aa31.15■■■□□ 2.58
AC007952.2-202ENST00000399093 CUX1P39880 1505 aa31.12■■■□□ 2.57
AC007952.2-202ENST00000399093 BIVM-ERCC5R4GMW8 1640 aa31.1■■■□□ 2.57
AC007952.2-202ENST00000399093 TOP2BQ02880 1626 aa31.08■■■□□ 2.57
AC007952.2-202ENST00000399093 URB2Q14146 1524 aaKnown RBP31.07■■■□□ 2.56
AC007952.2-202ENST00000399093 DNMBPQ6XZF7 1577 aa31.06■■■□□ 2.56
AC007952.2-202ENST00000399093 MRC2Q9UBG0 1479 aa31.06■■■□□ 2.56
AC007952.2-202ENST00000399093 THOC2Q8NI27 1593 aaKnown RBP31.03■■■□□ 2.56
AC007952.2-202ENST00000399093 TOPBP1Q92547 1522 aa31.01■■■□□ 2.55
AC007952.2-202ENST00000399093 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
AC007952.2-202ENST00000399093 WDR62O43379 1518 aa30.95■■■□□ 2.55
AC007952.2-202ENST00000399093 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
AC007952.2-202ENST00000399093 POLA1P09884 1462 aaPredicted RBP30.81■■■□□ 2.52
AC007952.2-202ENST00000399093 CUX2O14529 1486 aa30.68■■■□□ 2.5
AC007952.2-202ENST00000399093 RAD54L2Q9Y4B4 1467 aa30.67■■■□□ 2.5
AC007952.2-202ENST00000399093 SOGA1O94964 1423 aa30.65■■■□□ 2.5
AC007952.2-202ENST00000399093 WDR97A6NE52 1622 aa30.65■■■□□ 2.5
AC007952.2-202ENST00000399093 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
AC007952.2-202ENST00000399093 ABCA10Q8WWZ4 1543 aa30.58■■■□□ 2.49
AC007952.2-202ENST00000399093 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
AC007952.2-202ENST00000399093 RUSC2Q8N2Y8 1516 aa30.52■■■□□ 2.48
AC007952.2-202ENST00000399093 KIF27Q86VH2 1401 aa30.45■■■□□ 2.46
AC007952.2-202ENST00000399093 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
AC007952.2-202ENST00000399093 EEA1Q15075 1411 aa30.43■■■□□ 2.46
AC007952.2-202ENST00000399093 ZNF608Q9ULD9 1512 aaPredicted RBP30.41■■■□□ 2.46
AC007952.2-202ENST00000399093 FAM9AQ8IZU1 332 aaPredicted RBP30.39■■■□□ 2.46
AC007952.2-202ENST00000399093 TDRD9Q8NDG6 1382 aaKnown RBP30.39■■■□□ 2.45
AC007952.2-202ENST00000399093 EIF4G3O43432 1585 aaKnown RBP30.36■■■□□ 2.45
AC007952.2-202ENST00000399093 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
AC007952.2-202ENST00000399093 PBRM1Q86U86 1689 aa30.33■■■□□ 2.45
AC007952.2-202ENST00000399093 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.44
AC007952.2-202ENST00000399093 CSRNP3Q8WYN3 585 aa30.25■■■□□ 2.43
AC007952.2-202ENST00000399093 ERICH3Q5RHP9 1530 aa30.23■■■□□ 2.43
AC007952.2-202ENST00000399093 IGF1RP08069 1367 aa30.22■■■□□ 2.43
AC007952.2-202ENST00000399093 GRIN2BQ13224 1484 aa30.2■■■□□ 2.43
AC007952.2-202ENST00000399093 CUL7Q14999 1698 aa30.17■■■□□ 2.42
AC007952.2-202ENST00000399093 KIF21BO75037 1637 aa30.13■■■□□ 2.41
AC007952.2-202ENST00000399093 PRXQ9BXM0 1461 aa30.11■■■□□ 2.41
AC007952.2-202ENST00000399093 ADAMTS12P58397 1594 aa30.09■■■□□ 2.41
AC007952.2-202ENST00000399093 SNAPC4Q5SXM2 1469 aa30.08■■■□□ 2.41
AC007952.2-202ENST00000399093 CARMIL1Q5VZK9 1371 aa30.06■■■□□ 2.4
AC007952.2-202ENST00000399093 MAGI1Q96QZ7 1491 aaPredicted RBP30.04■■■□□ 2.4
AC007952.2-202ENST00000399093 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
AC007952.2-202ENST00000399093 FHAD1B1AJZ9 1412 aa30■■■□□ 2.39
AC007952.2-202ENST00000399093 GOLGA3Q08378 1498 aa29.99■■■□□ 2.39
AC007952.2-202ENST00000399093 EHMT2Q96KQ7 1210 aa29.95■■■□□ 2.39
AC007952.2-202ENST00000399093 LOC105371045A0A1W2PR82 267 aa29.94■■■□□ 2.38
AC007952.2-202ENST00000399093 SYNJ2O15056 1496 aa29.91■■■□□ 2.38
AC007952.2-202ENST00000399093 CHD1O14646 1710 aa29.86■■■□□ 2.37
AC007952.2-202ENST00000399093 GRIN2AQ12879 1464 aa29.84■■■□□ 2.37
AC007952.2-202ENST00000399093 CTTNBP2Q8WZ74 1663 aa29.79■■■□□ 2.36
AC007952.2-202ENST00000399093 UBTFP17480 764 aaKnown RBP29.77■■■□□ 2.36
AC007952.2-202ENST00000399093 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
AC007952.2-202ENST00000399093 FBLN2P98095 1184 aa29.74■■■□□ 2.35
AC007952.2-202ENST00000399093 TNIKQ9UKE5 1360 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms