RNA–Protein interactions for RNA: ENST00000398870.7

PIK3C3-202, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2 BASIC

Gene PIK3C3, Length 9,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-202ENST00000398870 DCAF8L2P0C7V8 631 aa11.48□□□□□ -0.57
PIK3C3-202ENST00000398870 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
PIK3C3-202ENST00000398870 FAM9AQ8IZU1 332 aaPredicted RBP11.1□□□□□ -0.63
PIK3C3-202ENST00000398870 ERICH6Q7L0X2 663 aa10.83□□□□□ -0.68
PIK3C3-202ENST00000398870 CCER1Q8TC90 406 aaPredicted RBP10.81□□□□□ -0.68
PIK3C3-202ENST00000398870 APLP2Q06481 763 aa10.81□□□□□ -0.68
PIK3C3-202ENST00000398870 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
PIK3C3-202ENST00000398870 SUPT5HO00267 1087 aaKnown RBP10.48□□□□□ -0.73
PIK3C3-202ENST00000398870 DAXXQ9UER7 740 aaPredicted RBP10.43□□□□□ -0.74
PIK3C3-202ENST00000398870 YTHDC1Q96MU7 727 aaKnown RBP10.41□□□□□ -0.74
PIK3C3-202ENST00000398870 NEFLP07196 543 aa10.38□□□□□ -0.75
PIK3C3-202ENST00000398870 ATP1B4Q9UN42 357 aaPredicted RBP10.35□□□□□ -0.75
PIK3C3-202ENST00000398870 MYT1Q01538 1121 aa10.31□□□□□ -0.76
PIK3C3-202ENST00000398870 MYT1LQ9UL68 1186 aa10.31□□□□□ -0.76
PIK3C3-202ENST00000398870 CENPBP07199 599 aaPredicted RBP10.28□□□□□ -0.76
PIK3C3-202ENST00000398870 TTBK1Q5TCY1 1321 aaPredicted RBP10.25□□□□□ -0.77
PIK3C3-202ENST00000398870 RANGAP1P46060 587 aaPredicted RBP10.2□□□□□ -0.78
PIK3C3-202ENST00000398870 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
PIK3C3-202ENST00000398870 CHIC1Q5VXU3 224 aa10.12□□□□□ -0.79
PIK3C3-202ENST00000398870 SLC4A1APQ9BWU0 796 aaKnown RBP10.12□□□□□ -0.79
PIK3C3-202ENST00000398870 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
PIK3C3-202ENST00000398870 PCGF6Q9BYE7 350 aa10.05□□□□□ -0.8
PIK3C3-202ENST00000398870 POLR3GLQ9BT43 218 aa10.02□□□□□ -0.81
PIK3C3-202ENST00000398870 CLSPNQ9HAW4 1339 aa10.01□□□□□ -0.81
PIK3C3-202ENST00000398870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.98□□□□□ -0.81
PIK3C3-202ENST00000398870 ZEB1P37275 1124 aaPredicted RBP9.98□□□□□ -0.81
PIK3C3-202ENST00000398870 HNRNPUL2Q1KMD3 747 aaKnown RBP9.98□□□□□ -0.81
PIK3C3-202ENST00000398870 ZBTB47Q9UFB7 747 aaPredicted RBP9.98□□□□□ -0.81
PIK3C3-202ENST00000398870 NISCHQ9Y2I1 1504 aa9.97□□□□□ -0.81
PIK3C3-202ENST00000398870 UBTFP17480 764 aaKnown RBP9.93□□□□□ -0.82
PIK3C3-202ENST00000398870 RTL5Q5HYW3 569 aaPredicted RBP9.92□□□□□ -0.82
PIK3C3-202ENST00000398870 SLC24A1O60721 1099 aa9.92□□□□□ -0.82
PIK3C3-202ENST00000398870 NEFMP07197 916 aa9.83□□□□□ -0.84
PIK3C3-202ENST00000398870 CDK11BP21127 795 aaKnown RBP9.78□□□□□ -0.84
PIK3C3-202ENST00000398870 CDK11AQ9UQ88 783 aaPredicted RBP9.78□□□□□ -0.84
PIK3C3-202ENST00000398870 BCANQ96GW7 911 aa9.78□□□□□ -0.84
PIK3C3-202ENST00000398870 CNGB1Q14028 1251 aaPredicted RBP9.77□□□□□ -0.84
PIK3C3-202ENST00000398870 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
PIK3C3-202ENST00000398870 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.86
PIK3C3-202ENST00000398870 BCL11AQ9H165 835 aa9.68□□□□□ -0.86
PIK3C3-202ENST00000398870 ITGAEP38570 1179 aa9.67□□□□□ -0.86
PIK3C3-202ENST00000398870 ANP32BQ92688 251 aaKnown RBP9.65□□□□□ -0.86
PIK3C3-202ENST00000398870 ESF1Q9H501 851 aaKnown RBP9.62□□□□□ -0.87
PIK3C3-202ENST00000398870 HSP90AA1P07900 732 aaKnown RBP9.54□□□□□ -0.88
PIK3C3-202ENST00000398870 A0A0G2JS52 829 aa9.5□□□□□ -0.89
PIK3C3-202ENST00000398870 TRIM52Q96A61 297 aa9.49□□□□□ -0.89
PIK3C3-202ENST00000398870 SCAF1Q9H7N4 1312 aaKnown RBP9.47□□□□□ -0.89
PIK3C3-202ENST00000398870 NPM2Q86SE8 214 aaKnown RBP9.47□□□□□ -0.89
PIK3C3-202ENST00000398870 STAG3Q9UJ98 1225 aa9.46□□□□□ -0.9
PIK3C3-202ENST00000398870 ZNF326Q5BKZ1 582 aaKnown RBP9.46□□□□□ -0.9
PIK3C3-202ENST00000398870 PLPPR3Q6T4P5 718 aa9.45□□□□□ -0.9
PIK3C3-202ENST00000398870 GLIPR1L2Q4G1C9 344 aa9.44□□□□□ -0.9
PIK3C3-202ENST00000398870 FAM50AQ14320 339 aaKnown RBP9.43□□□□□ -0.9
PIK3C3-202ENST00000398870 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
PIK3C3-202ENST00000398870 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
PIK3C3-202ENST00000398870 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
PIK3C3-202ENST00000398870 ANP32AP39687 249 aaKnown RBP9.39□□□□□ -0.91
PIK3C3-202ENST00000398870 FBLN2P98095 1184 aa9.37□□□□□ -0.91
PIK3C3-202ENST00000398870 NCBP3Q53F19 620 aaKnown RBP9.37□□□□□ -0.91
PIK3C3-202ENST00000398870 ANP32CO43423 234 aa9.34□□□□□ -0.91
PIK3C3-202ENST00000398870 NPHP1O15259 732 aa9.33□□□□□ -0.92
PIK3C3-202ENST00000398870 MYH16Q9H6N6 1097 aa9.31□□□□□ -0.92
PIK3C3-202ENST00000398870 KRI1Q8N9T8 703 aaKnown RBP9.31□□□□□ -0.92
PIK3C3-202ENST00000398870 HAP1P54257 671 aaPredicted RBP9.3□□□□□ -0.92
PIK3C3-202ENST00000398870 ZRSR1Q15695 479 aaKnown RBP9.3□□□□□ -0.92
PIK3C3-202ENST00000398870 CLSTN1O94985 981 aa9.3□□□□□ -0.92
PIK3C3-202ENST00000398870 TRIM44Q96DX7 344 aaPredicted RBP9.29□□□□□ -0.92
PIK3C3-202ENST00000398870 TRIM26Q12899 539 aaPredicted RBP9.29□□□□□ -0.92
PIK3C3-202ENST00000398870 NEUROD1Q13562 356 aa9.28□□□□□ -0.92
PIK3C3-202ENST00000398870 EIF5BO60841 1220 aaKnown RBP9.28□□□□□ -0.92
PIK3C3-202ENST00000398870 PRM3Q9NNZ6 103 aa9.27□□□□□ -0.93
PIK3C3-202ENST00000398870 C14orf37Q86TY3 774 aa9.26□□□□□ -0.93
PIK3C3-202ENST00000398870 NPM1P06748 294 aaKnown RBP eCLIP9.24□□□□□ -0.93
PIK3C3-202ENST00000398870 DIEXFQ68CQ4 756 aaKnown RBP9.24□□□□□ -0.93
PIK3C3-202ENST00000398870 ZBTB7CA1YPR0 619 aa9.24□□□□□ -0.93
PIK3C3-202ENST00000398870 NCLP19338 710 aaKnown RBP9.23□□□□□ -0.93
PIK3C3-202ENST00000398870 CHGAP10645 457 aaKnown RBP9.22□□□□□ -0.93
PIK3C3-202ENST00000398870 TNNT2P45379 298 aaPredicted RBP9.21□□□□□ -0.93
PIK3C3-202ENST00000398870 ARXQ96QS3 562 aa9.2□□□□□ -0.94
PIK3C3-202ENST00000398870 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.19□□□□□ -0.94
PIK3C3-202ENST00000398870 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
PIK3C3-202ENST00000398870 GOLGA2Q08379 1002 aa9.17□□□□□ -0.94
PIK3C3-202ENST00000398870 ANP32EQ9BTT0 268 aa9.16□□□□□ -0.94
PIK3C3-202ENST00000398870 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
PIK3C3-202ENST00000398870 HRCP23327 699 aa9.15□□□□□ -0.95
PIK3C3-202ENST00000398870 ZNF777Q9ULD5 760 aaPredicted RBP9.14□□□□□ -0.95
PIK3C3-202ENST00000398870 PLEKHG5O94827 1062 aa9.14□□□□□ -0.95
PIK3C3-202ENST00000398870 L1TD1Q5T7N2 865 aaKnown RBP9.12□□□□□ -0.95
PIK3C3-202ENST00000398870 PPP1R15AO75807 674 aaPredicted RBP9.12□□□□□ -0.95
PIK3C3-202ENST00000398870 GOLGA6L22H0YM25 854 aa9.11□□□□□ -0.95
PIK3C3-202ENST00000398870 KIAA2012Q0VF49 1180 aa9.11□□□□□ -0.95
PIK3C3-202ENST00000398870 WDR43Q15061 677 aaKnown RBP eCLIP9.09□□□□□ -0.95
PIK3C3-202ENST00000398870 PTMAP06454 111 aaKnown RBP9.09□□□□□ -0.95
PIK3C3-202ENST00000398870 TMX4Q9H1E5 349 aaPredicted RBP9.08□□□□□ -0.96
PIK3C3-202ENST00000398870 NRDCO43847 1150 aa9.08□□□□□ -0.96
PIK3C3-202ENST00000398870 NOC3LQ8WTT2 800 aaKnown RBP9.08□□□□□ -0.96
PIK3C3-202ENST00000398870 ISY1Q9ULR0 285 aaKnown RBP9.08□□□□□ -0.96
PIK3C3-202ENST00000398870 EIF4G2P78344 907 aaKnown RBP eCLIP9.08□□□□□ -0.96
PIK3C3-202ENST00000398870 ARID3CA6NKF2 412 aa9.06□□□□□ -0.96
PIK3C3-202ENST00000398870 ARID4BQ4LE39 1312 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms