RNA–Protein interactions for RNA: ENST00000398564.5

ARHGEF10-204, Transcript of Rho guanine nucleotide exchange factor 10, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF10, Length 5,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF10-204ENST00000398564 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.34□□□□□ -0.112e-7■■■■■ 197.3
ARHGEF10-204ENST00000398564 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.23□□□□□ -0.618e-7■■■■■ 170.8
ARHGEF10-204ENST00000398564 SF3B1O75533 1304 aaKnown RBP eCLIP11.99□□□□□ -0.493e-6■■■■■ 168.7
ARHGEF10-204ENST00000398564 AARSP49588 968 aaKnown RBP eCLIP12.41□□□□□ -0.426e-7■■■■■ 74.4
ARHGEF10-204ENST00000398564 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.22□□□□□ -0.455e-7■■■■■ 73.4
ARHGEF10-204ENST00000398564 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.476e-7■■■■■ 64
ARHGEF10-204ENST00000398564 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.32□□□□□ -0.445e-7■■■■■ 52.9
ARHGEF10-204ENST00000398564 EFTUD2Q15029 972 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■■■■■ 52
ARHGEF10-204ENST00000398564 FUSP35637 526 aaKnown RBP eCLIP9.34□□□□□ -0.912e-13■■■■■ 47.4
ARHGEF10-204ENST00000398564 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.34□□□□□ -0.112e-6■■■■■ 45.3
ARHGEF10-204ENST00000398564 ZRANB2O95218 330 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■■■■ 44.9
ARHGEF10-204ENST00000398564 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.83□□□□□ -0.521e-6■■■■■ 44.9
ARHGEF10-204ENST00000398564 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.16□□□□□ -0.629e-7■■■■■ 41
ARHGEF10-204ENST00000398564 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.47□□□□□ -0.413e-6■■■■■ 39.3
ARHGEF10-204ENST00000398564 DDX6P26196 483 aaKnown RBP eCLIP11.62□□□□□ -0.553e-6■■■■■ 38.6
ARHGEF10-204ENST00000398564 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.88□□□□□ -0.352e-6■■■■■ 34.6
ARHGEF10-204ENST00000398564 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.75□□□□□ -0.695e-37■■■■■ 33.5
ARHGEF10-204ENST00000398564 PUM1Q14671 1186 aaKnown RBP eCLIP11.52□□□□□ -0.579e-7■■■■■ 33.1
ARHGEF10-204ENST00000398564 AKAP1Q92667 903 aaKnown RBP eCLIP11.48□□□□□ -0.576e-7■■■■■ 32.1
ARHGEF10-204ENST00000398564 EWSR1Q01844 656 aaKnown RBP eCLIP10.07□□□□□ -0.82e-6■■■■■ 27.1
ARHGEF10-204ENST00000398564 ZNF622Q969S3 477 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■■■■ 26.8
ARHGEF10-204ENST00000398564 EIF4G2P78344 907 aaKnown RBP eCLIP15.39■□□□□ 0.052e-7■■■■□ 26.2
ARHGEF10-204ENST00000398564 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.48□□□□□ -1.052e-6■■■■□ 25.3
ARHGEF10-204ENST00000398564 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■■■□ 25.3
ARHGEF10-204ENST00000398564 HNRNPMP52272 730 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■■■■□ 23.1
ARHGEF10-204ENST00000398564 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■■■□ 21.5
ARHGEF10-204ENST00000398564 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.4□□□□□ -0.264e-7■■■□□ 18
ARHGEF10-204ENST00000398564 DDX24Q9GZR7 859 aaKnown RBP eCLIP14□□□□□ -0.172e-6■■■□□ 15
ARHGEF10-204ENST00000398564 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■■□□□ 12
ARHGEF10-204ENST00000398564 ZC3H11AO75152 810 aaKnown RBP eCLIP12.1□□□□□ -0.475e-6■□□□□ 9.7
ARHGEF10-204ENST00000398564 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.8□□□□□ -0.527e-13■□□□□ 8.5
Retrieved 31 of 31 RNA–protein pairs in 8.3 ms