RNA–Protein interactions for RNA: ENST00000398207.8

ABCA2-204, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 5

Gene ABCA2, Length 876 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-204ENST00000398207 NISCHQ9Y2I1 1504 aa38.55■■■■□ 3.76
ABCA2-204ENST00000398207 CCDC180Q9P1Z9 1646 aa34.27■■■■□ 3.08
ABCA2-204ENST00000398207 ABCC9O60706 1549 aa33.44■■■□□ 2.94
ABCA2-204ENST00000398207 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
ABCA2-204ENST00000398207 NACADO15069 1562 aa32.19■■■□□ 2.74
ABCA2-204ENST00000398207 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
ABCA2-204ENST00000398207 ZCCHC6Q5VYS8 1495 aaKnown RBP32.12■■■□□ 2.73
ABCA2-204ENST00000398207 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
ABCA2-204ENST00000398207 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
ABCA2-204ENST00000398207 UNC13AQ9UPW8 1703 aa31.52■■■□□ 2.64
ABCA2-204ENST00000398207 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
ABCA2-204ENST00000398207 PABPN1Q86U42 306 aaKnown RBP eCLIP31.24■■■□□ 2.59
ABCA2-204ENST00000398207 BICRAQ9NZM4 1560 aa31.23■■■□□ 2.59
ABCA2-204ENST00000398207 SHROOM4Q9ULL8 1493 aa30.91■■■□□ 2.54
ABCA2-204ENST00000398207 DNAJC5BQ9UF47 199 aa30.6■■■□□ 2.49
ABCA2-204ENST00000398207 EIF4G1Q04637 1599 aaKnown RBP30.41■■■□□ 2.46
ABCA2-204ENST00000398207 CC2D2AQ9P2K1 1620 aa30.27■■■□□ 2.44
ABCA2-204ENST00000398207 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
ABCA2-204ENST00000398207 SMARCA4P51532 1647 aa29.91■■■□□ 2.38
ABCA2-204ENST00000398207 BAZ1AQ9NRL2 1556 aaPredicted RBP29.88■■■□□ 2.37
ABCA2-204ENST00000398207 ATAD2BQ9ULI0 1458 aa29.72■■■□□ 2.35
ABCA2-204ENST00000398207 SMARCA2P51531 1590 aa29.7■■■□□ 2.35
ABCA2-204ENST00000398207 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
ABCA2-204ENST00000398207 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
ABCA2-204ENST00000398207 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
ABCA2-204ENST00000398207 HMGXB3Q12766 1538 aa29.56■■■□□ 2.32
ABCA2-204ENST00000398207 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
ABCA2-204ENST00000398207 WIZO95785 1651 aa29.4■■■□□ 2.3
ABCA2-204ENST00000398207 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
ABCA2-204ENST00000398207 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
ABCA2-204ENST00000398207 NESP48681 1621 aa28.95■■■□□ 2.23
ABCA2-204ENST00000398207 LAMC3Q9Y6N6 1575 aa28.91■■■□□ 2.22
ABCA2-204ENST00000398207 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
ABCA2-204ENST00000398207 CADPSQ9ULU8 1353 aa28.82■■■□□ 2.2
ABCA2-204ENST00000398207 CCDC88BA6NC98 1476 aa28.73■■■□□ 2.19
ABCA2-204ENST00000398207 PDS5BQ9NTI5 1447 aa28.7■■■□□ 2.19
ABCA2-204ENST00000398207 CFTRP13569 1480 aa28.67■■■□□ 2.18
ABCA2-204ENST00000398207 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
ABCA2-204ENST00000398207 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
ABCA2-204ENST00000398207 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
ABCA2-204ENST00000398207 THOC2Q8NI27 1593 aaKnown RBP28.53■■■□□ 2.16
ABCA2-204ENST00000398207 CUX2O14529 1486 aa28.5■■■□□ 2.15
ABCA2-204ENST00000398207 FANCD2Q9BXW9 1451 aa28.5■■■□□ 2.15
ABCA2-204ENST00000398207 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
ABCA2-204ENST00000398207 MRC2Q9UBG0 1479 aa28.41■■■□□ 2.14
ABCA2-204ENST00000398207 WDR62O43379 1518 aa28.33■■■□□ 2.13
ABCA2-204ENST00000398207 URB2Q14146 1524 aaKnown RBP28.21■■■□□ 2.11
ABCA2-204ENST00000398207 TOPBP1Q92547 1522 aa28.06■■■□□ 2.08
ABCA2-204ENST00000398207 ABCC8Q09428 1581 aa28.06■■■□□ 2.08
ABCA2-204ENST00000398207 DNMBPQ6XZF7 1577 aa28.04■■■□□ 2.08
ABCA2-204ENST00000398207 CUX1P39880 1505 aa27.87■■■□□ 2.05
ABCA2-204ENST00000398207 IFT140Q96RY7 1462 aa27.86■■■□□ 2.05
ABCA2-204ENST00000398207 POLA1P09884 1462 aaPredicted RBP27.82■■■□□ 2.04
ABCA2-204ENST00000398207 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.04
ABCA2-204ENST00000398207 TARBP1Q13395 1621 aaKnown RBP27.75■■■□□ 2.03
ABCA2-204ENST00000398207 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
ABCA2-204ENST00000398207 WRNQ14191 1432 aaPredicted RBP eCLIP27.7■■■□□ 2.03
ABCA2-204ENST00000398207 SOGA1O94964 1423 aa27.69■■■□□ 2.02
ABCA2-204ENST00000398207 RAD54L2Q9Y4B4 1467 aa27.69■■■□□ 2.02
ABCA2-204ENST00000398207 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
ABCA2-204ENST00000398207 BIVM-ERCC5R4GMW8 1640 aa27.66■■■□□ 2.02
ABCA2-204ENST00000398207 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
ABCA2-204ENST00000398207 EIF4G3O43432 1585 aaKnown RBP27.64■■■□□ 2.01
ABCA2-204ENST00000398207 AQRO60306 1485 aaKnown RBP eCLIP27.57■■■□□ 24e-7■■■□□ 18.1
ABCA2-204ENST00000398207 WDR97A6NE52 1622 aa27.56■■■□□ 2
ABCA2-204ENST00000398207 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
ABCA2-204ENST00000398207 DNAJC5Q9H3Z4 198 aa27.52■■■□□ 2
ABCA2-204ENST00000398207 ABCA10Q8WWZ4 1543 aa27.5■■□□□ 1.99
ABCA2-204ENST00000398207 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
ABCA2-204ENST00000398207 GAPVD1Q14C86 1478 aa27.39■■□□□ 1.98
ABCA2-204ENST00000398207 GRIN2BQ13224 1484 aa27.38■■□□□ 1.97
ABCA2-204ENST00000398207 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
ABCA2-204ENST00000398207 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
ABCA2-204ENST00000398207 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
ABCA2-204ENST00000398207 MAGI1Q96QZ7 1491 aaPredicted RBP27.31■■□□□ 1.96
ABCA2-204ENST00000398207 CHD1O14646 1710 aa27.3■■□□□ 1.96
ABCA2-204ENST00000398207 FBLN2P98095 1184 aa27.23■■□□□ 1.95
ABCA2-204ENST00000398207 SYNJ2O15056 1496 aa27.19■■□□□ 1.94
ABCA2-204ENST00000398207 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
ABCA2-204ENST00000398207 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
ABCA2-204ENST00000398207 ADAMTS12P58397 1594 aa27.14■■□□□ 1.94
ABCA2-204ENST00000398207 KIF27Q86VH2 1401 aa27.13■■□□□ 1.93
ABCA2-204ENST00000398207 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
ABCA2-204ENST00000398207 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
ABCA2-204ENST00000398207 GRIN2AQ12879 1464 aa27.02■■□□□ 1.92
ABCA2-204ENST00000398207 IGF1RP08069 1367 aa26.99■■□□□ 1.91
ABCA2-204ENST00000398207 CLASP1Q7Z460 1538 aa26.98■■□□□ 1.91
ABCA2-204ENST00000398207 CUL7Q14999 1698 aa26.95■■□□□ 1.91
ABCA2-204ENST00000398207 NUP160Q12769 1436 aa26.9■■□□□ 1.9
ABCA2-204ENST00000398207 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
ABCA2-204ENST00000398207 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
ABCA2-204ENST00000398207 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
ABCA2-204ENST00000398207 CEP170Q5SW79 1584 aa26.89■■□□□ 1.9
ABCA2-204ENST00000398207 ARHGEF11O15085 1522 aa26.89■■□□□ 1.89
ABCA2-204ENST00000398207 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.89
ABCA2-204ENST00000398207 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
ABCA2-204ENST00000398207 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
ABCA2-204ENST00000398207 SHROOM2Q13796 1616 aa26.71■■□□□ 1.87
ABCA2-204ENST00000398207 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.87
ABCA2-204ENST00000398207 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms