RNA–Protein interactions for RNA: ENST00000398028.3

PDCL3P5-201, Transcript of phosducin-like 3 pseudogene 5, humanhuman

BASIC

Gene PDCL3P5, Length 722 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P5-201ENST00000398028 NISCHQ9Y2I1 1504 aa17.32■□□□□ 0.36
PDCL3P5-201ENST00000398028 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
PDCL3P5-201ENST00000398028 CHIC1Q5VXU3 224 aa15.8■□□□□ 0.12
PDCL3P5-201ENST00000398028 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
PDCL3P5-201ENST00000398028 ABCC9O60706 1549 aa15.3■□□□□ 0.04
PDCL3P5-201ENST00000398028 RB1CC1Q8TDY2 1594 aa14.62□□□□□ -0.07
PDCL3P5-201ENST00000398028 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
PDCL3P5-201ENST00000398028 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
PDCL3P5-201ENST00000398028 NACADO15069 1562 aa14.56□□□□□ -0.08
PDCL3P5-201ENST00000398028 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
PDCL3P5-201ENST00000398028 MYO15BQ96JP2 1530 aa14.39□□□□□ -0.11
PDCL3P5-201ENST00000398028 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
PDCL3P5-201ENST00000398028 DCAF1Q9Y4B6 1507 aa14.29□□□□□ -0.12
PDCL3P5-201ENST00000398028 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
PDCL3P5-201ENST00000398028 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
PDCL3P5-201ENST00000398028 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
PDCL3P5-201ENST00000398028 PHF23Q9BUL5 403 aaPredicted RBP14□□□□□ -0.17
PDCL3P5-201ENST00000398028 SHROOM4Q9ULL8 1493 aa13.98□□□□□ -0.17
PDCL3P5-201ENST00000398028 CC2D2AQ9P2K1 1620 aa13.83□□□□□ -0.2
PDCL3P5-201ENST00000398028 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
PDCL3P5-201ENST00000398028 CECR2Q9BXF3 1484 aa13.81□□□□□ -0.2
PDCL3P5-201ENST00000398028 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
PDCL3P5-201ENST00000398028 SMARCA4P51532 1647 aa13.48□□□□□ -0.25
PDCL3P5-201ENST00000398028 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
PDCL3P5-201ENST00000398028 ATAD2BQ9ULI0 1458 aa13.43□□□□□ -0.26
PDCL3P5-201ENST00000398028 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
PDCL3P5-201ENST00000398028 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
PDCL3P5-201ENST00000398028 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
PDCL3P5-201ENST00000398028 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
PDCL3P5-201ENST00000398028 CUX2O14529 1486 aa13.35□□□□□ -0.27
PDCL3P5-201ENST00000398028 BAZ1BQ9UIG0 1483 aaKnown RBP13.32□□□□□ -0.28
PDCL3P5-201ENST00000398028 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
PDCL3P5-201ENST00000398028 SENP3Q9H4L4 574 aaPredicted RBP13.25□□□□□ -0.29
PDCL3P5-201ENST00000398028 WIZO95785 1651 aa13.22□□□□□ -0.29
PDCL3P5-201ENST00000398028 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
PDCL3P5-201ENST00000398028 NESP48681 1621 aa13.2□□□□□ -0.3
PDCL3P5-201ENST00000398028 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
PDCL3P5-201ENST00000398028 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
PDCL3P5-201ENST00000398028 TOP2AP11388 1531 aaKnown RBP13.05□□□□□ -0.32
PDCL3P5-201ENST00000398028 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
PDCL3P5-201ENST00000398028 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
PDCL3P5-201ENST00000398028 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
PDCL3P5-201ENST00000398028 PDS5BQ9NTI5 1447 aa13.03□□□□□ -0.32
PDCL3P5-201ENST00000398028 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.33
PDCL3P5-201ENST00000398028 CFTRP13569 1480 aa12.93□□□□□ -0.34
PDCL3P5-201ENST00000398028 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
PDCL3P5-201ENST00000398028 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
PDCL3P5-201ENST00000398028 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
PDCL3P5-201ENST00000398028 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
PDCL3P5-201ENST00000398028 TRIM41Q8WV44 630 aa12.88□□□□□ -0.35
PDCL3P5-201ENST00000398028 WDR62O43379 1518 aa12.87□□□□□ -0.35
PDCL3P5-201ENST00000398028 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
PDCL3P5-201ENST00000398028 URB2Q14146 1524 aaKnown RBP12.79□□□□□ -0.36
PDCL3P5-201ENST00000398028 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
PDCL3P5-201ENST00000398028 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
PDCL3P5-201ENST00000398028 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
PDCL3P5-201ENST00000398028 ABCC8Q09428 1581 aa12.64□□□□□ -0.39
PDCL3P5-201ENST00000398028 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
PDCL3P5-201ENST00000398028 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
PDCL3P5-201ENST00000398028 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
PDCL3P5-201ENST00000398028 POLA1P09884 1462 aaPredicted RBP12.57□□□□□ -0.4
PDCL3P5-201ENST00000398028 RIMBP3CA6NJZ7 1639 aa12.56□□□□□ -0.4
PDCL3P5-201ENST00000398028 RIMBP3BA6NNM3 1639 aa12.56□□□□□ -0.4
PDCL3P5-201ENST00000398028 RIMBP3Q9UFD9 1639 aa12.56□□□□□ -0.4
PDCL3P5-201ENST00000398028 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
PDCL3P5-201ENST00000398028 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
PDCL3P5-201ENST00000398028 CUX1P39880 1505 aa12.54□□□□□ -0.4
PDCL3P5-201ENST00000398028 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
PDCL3P5-201ENST00000398028 AQRO60306 1485 aaKnown RBP eCLIP12.53□□□□□ -0.4
PDCL3P5-201ENST00000398028 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
PDCL3P5-201ENST00000398028 SOGA1O94964 1423 aa12.52□□□□□ -0.41
PDCL3P5-201ENST00000398028 TDRD9Q8NDG6 1382 aaKnown RBP12.48□□□□□ -0.41
PDCL3P5-201ENST00000398028 ARHGEF11O15085 1522 aa12.47□□□□□ -0.41
PDCL3P5-201ENST00000398028 FBLN2P98095 1184 aa12.43□□□□□ -0.42
PDCL3P5-201ENST00000398028 WDR97A6NE52 1622 aa12.42□□□□□ -0.42
PDCL3P5-201ENST00000398028 CHD1O14646 1710 aa12.42□□□□□ -0.42
PDCL3P5-201ENST00000398028 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.42
PDCL3P5-201ENST00000398028 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.43
PDCL3P5-201ENST00000398028 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
PDCL3P5-201ENST00000398028 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
PDCL3P5-201ENST00000398028 BIVM-ERCC5R4GMW8 1640 aa12.39□□□□□ -0.43
PDCL3P5-201ENST00000398028 GRIN2BQ13224 1484 aa12.38□□□□□ -0.43
PDCL3P5-201ENST00000398028 ABCA10Q8WWZ4 1543 aa12.37□□□□□ -0.43
PDCL3P5-201ENST00000398028 PBRM1Q86U86 1689 aa12.36□□□□□ -0.43
PDCL3P5-201ENST00000398028 GAPVD1Q14C86 1478 aa12.36□□□□□ -0.43
PDCL3P5-201ENST00000398028 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
PDCL3P5-201ENST00000398028 ABCA5Q8WWZ7 1642 aa12.35□□□□□ -0.43
PDCL3P5-201ENST00000398028 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
PDCL3P5-201ENST00000398028 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
PDCL3P5-201ENST00000398028 FOXD1Q16676 465 aa12.32□□□□□ -0.44
PDCL3P5-201ENST00000398028 ARAP1Q96P48 1450 aa12.32□□□□□ -0.44
PDCL3P5-201ENST00000398028 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
PDCL3P5-201ENST00000398028 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
PDCL3P5-201ENST00000398028 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.45
PDCL3P5-201ENST00000398028 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
PDCL3P5-201ENST00000398028 ERICH3Q5RHP9 1530 aa12.22□□□□□ -0.45
PDCL3P5-201ENST00000398028 GRIN2AQ12879 1464 aa12.22□□□□□ -0.45
PDCL3P5-201ENST00000398028 PPP6R1Q9UPN7 881 aa12.21□□□□□ -0.45
PDCL3P5-201ENST00000398028 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
PDCL3P5-201ENST00000398028 ADRA2BP18089 450 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms