RNA–Protein interactions for RNA: ENST00000397561.3

LDHAP4-201, Transcript of lactate dehydrogenase A pseudogene 4, humanhuman

BASIC

Gene LDHAP4, Length 998 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHAP4-201ENST00000397561 NISCHQ9Y2I1 1504 aa21■□□□□ 0.95
LDHAP4-201ENST00000397561 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
LDHAP4-201ENST00000397561 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
LDHAP4-201ENST00000397561 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
LDHAP4-201ENST00000397561 ABCC9O60706 1549 aa17.68■□□□□ 0.42
LDHAP4-201ENST00000397561 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
LDHAP4-201ENST00000397561 DCAF1Q9Y4B6 1507 aa17.36■□□□□ 0.37
LDHAP4-201ENST00000397561 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
LDHAP4-201ENST00000397561 NACADO15069 1562 aa17.25■□□□□ 0.35
LDHAP4-201ENST00000397561 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
LDHAP4-201ENST00000397561 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
LDHAP4-201ENST00000397561 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
LDHAP4-201ENST00000397561 SCRIBQ14160 1630 aa17■□□□□ 0.31
LDHAP4-201ENST00000397561 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
LDHAP4-201ENST00000397561 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
LDHAP4-201ENST00000397561 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
LDHAP4-201ENST00000397561 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
LDHAP4-201ENST00000397561 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
LDHAP4-201ENST00000397561 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
LDHAP4-201ENST00000397561 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
LDHAP4-201ENST00000397561 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
LDHAP4-201ENST00000397561 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
LDHAP4-201ENST00000397561 WIZO95785 1651 aa16.17■□□□□ 0.18
LDHAP4-201ENST00000397561 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
LDHAP4-201ENST00000397561 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
LDHAP4-201ENST00000397561 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
LDHAP4-201ENST00000397561 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
LDHAP4-201ENST00000397561 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
LDHAP4-201ENST00000397561 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
LDHAP4-201ENST00000397561 PHF23Q9BUL5 403 aaPredicted RBP15.93■□□□□ 0.14
LDHAP4-201ENST00000397561 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
LDHAP4-201ENST00000397561 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
LDHAP4-201ENST00000397561 BAZ1BQ9UIG0 1483 aaKnown RBP15.89■□□□□ 0.13
LDHAP4-201ENST00000397561 NCAPD3P42695 1498 aa15.86■□□□□ 0.13
LDHAP4-201ENST00000397561 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
LDHAP4-201ENST00000397561 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.1
LDHAP4-201ENST00000397561 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
LDHAP4-201ENST00000397561 NESP48681 1621 aa15.46■□□□□ 0.07
LDHAP4-201ENST00000397561 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
LDHAP4-201ENST00000397561 CFTRP13569 1480 aa15.45■□□□□ 0.06
LDHAP4-201ENST00000397561 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
LDHAP4-201ENST00000397561 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
LDHAP4-201ENST00000397561 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
LDHAP4-201ENST00000397561 FANCD2Q9BXW9 1451 aa15.29■□□□□ 0.04
LDHAP4-201ENST00000397561 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
LDHAP4-201ENST00000397561 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
LDHAP4-201ENST00000397561 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
LDHAP4-201ENST00000397561 PDS5BQ9NTI5 1447 aa15.23■□□□□ 0.03
LDHAP4-201ENST00000397561 CUX1P39880 1505 aa15.21■□□□□ 0.03
LDHAP4-201ENST00000397561 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
LDHAP4-201ENST00000397561 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
LDHAP4-201ENST00000397561 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
LDHAP4-201ENST00000397561 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
LDHAP4-201ENST00000397561 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
LDHAP4-201ENST00000397561 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
LDHAP4-201ENST00000397561 DNAJC5Q9H3Z4 198 aa15.13■□□□□ 0.01
LDHAP4-201ENST00000397561 TOPBP1Q92547 1522 aa15.12■□□□□ 0.01
LDHAP4-201ENST00000397561 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
LDHAP4-201ENST00000397561 FOXD1Q16676 465 aa15.11■□□□□ 0.01
LDHAP4-201ENST00000397561 WDR62O43379 1518 aa15.09■□□□□ 0.01
LDHAP4-201ENST00000397561 TRIM41Q8WV44 630 aa15.08■□□□□ 0
LDHAP4-201ENST00000397561 WDR97A6NE52 1622 aa15.06■□□□□ 0
LDHAP4-201ENST00000397561 FGD5Q6ZNL6 1462 aa15.06■□□□□ 0
LDHAP4-201ENST00000397561 POLA1P09884 1462 aaPredicted RBP15.02■□□□□ -0
LDHAP4-201ENST00000397561 TARBP1Q13395 1621 aaKnown RBP14.99□□□□□ -0.01
LDHAP4-201ENST00000397561 RAD54L2Q9Y4B4 1467 aa14.96□□□□□ -0.01
LDHAP4-201ENST00000397561 CUX2O14529 1486 aa14.95□□□□□ -0.02
LDHAP4-201ENST00000397561 RUSC2Q8N2Y8 1516 aa14.93□□□□□ -0.02
LDHAP4-201ENST00000397561 SOGA1O94964 1423 aa14.92□□□□□ -0.02
LDHAP4-201ENST00000397561 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
LDHAP4-201ENST00000397561 ABCA5Q8WWZ7 1642 aa14.9□□□□□ -0.02
LDHAP4-201ENST00000397561 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
LDHAP4-201ENST00000397561 EIF4G3O43432 1585 aaKnown RBP14.86□□□□□ -0.03
LDHAP4-201ENST00000397561 IFT140Q96RY7 1462 aa14.86□□□□□ -0.03
LDHAP4-201ENST00000397561 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
LDHAP4-201ENST00000397561 FAM9AQ8IZU1 332 aaPredicted RBP14.83□□□□□ -0.04
LDHAP4-201ENST00000397561 KIF27Q86VH2 1401 aa14.81□□□□□ -0.04
LDHAP4-201ENST00000397561 EEA1Q15075 1411 aa14.79□□□□□ -0.04
LDHAP4-201ENST00000397561 TDRD9Q8NDG6 1382 aaKnown RBP14.78□□□□□ -0.04
LDHAP4-201ENST00000397561 GAPVD1Q14C86 1478 aa14.77□□□□□ -0.04
LDHAP4-201ENST00000397561 POTEDQ86YR6 584 aa14.77□□□□□ -0.05
LDHAP4-201ENST00000397561 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.05
LDHAP4-201ENST00000397561 CUL7Q14999 1698 aa14.76□□□□□ -0.05
LDHAP4-201ENST00000397561 KIF21BO75037 1637 aa14.75□□□□□ -0.05
LDHAP4-201ENST00000397561 ERICH3Q5RHP9 1530 aa14.74□□□□□ -0.05
LDHAP4-201ENST00000397561 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
LDHAP4-201ENST00000397561 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
LDHAP4-201ENST00000397561 IGF1RP08069 1367 aa14.69□□□□□ -0.06
LDHAP4-201ENST00000397561 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
LDHAP4-201ENST00000397561 CHD1O14646 1710 aa14.68□□□□□ -0.06
LDHAP4-201ENST00000397561 SNAPC4Q5SXM2 1469 aa14.67□□□□□ -0.06
LDHAP4-201ENST00000397561 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
LDHAP4-201ENST00000397561 CTTNBP2Q8WZ74 1663 aa14.66□□□□□ -0.06
LDHAP4-201ENST00000397561 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
LDHAP4-201ENST00000397561 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
LDHAP4-201ENST00000397561 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
LDHAP4-201ENST00000397561 LOC105371045A0A1W2PR82 267 aa14.62□□□□□ -0.07
LDHAP4-201ENST00000397561 MAGI1Q96QZ7 1491 aaPredicted RBP14.62□□□□□ -0.07
LDHAP4-201ENST00000397561 CARMIL1Q5VZK9 1371 aa14.61□□□□□ -0.07
LDHAP4-201ENST00000397561 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms