RNA–Protein interactions for RNA: ENST00000397088.3

GPER1-202, Transcript of G protein-coupled estrogen receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPER1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPER1-202ENST00000397088 NISCHQ9Y2I1 1504 aa30.55■■■□□ 2.48
GPER1-202ENST00000397088 HRCP23327 699 aa27.87■■■□□ 2.05
GPER1-202ENST00000397088 PELP1Q8IZL8 1130 aaKnown RBP27.46■■□□□ 1.99
GPER1-202ENST00000397088 PPARGC1BQ86YN6 1023 aaKnown RBP27.18■■□□□ 1.94
GPER1-202ENST00000397088 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
GPER1-202ENST00000397088 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
GPER1-202ENST00000397088 MYO15BQ96JP2 1530 aa26.78■■□□□ 1.88
GPER1-202ENST00000397088 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
GPER1-202ENST00000397088 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
GPER1-202ENST00000397088 CCDC180Q9P1Z9 1646 aa26.56■■□□□ 1.84
GPER1-202ENST00000397088 MYT1Q01538 1121 aa26.53■■□□□ 1.84
GPER1-202ENST00000397088 SCAF1Q9H7N4 1312 aaKnown RBP26.5■■□□□ 1.83
GPER1-202ENST00000397088 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
GPER1-202ENST00000397088 TRIM26Q12899 539 aaPredicted RBP26.19■■□□□ 1.78
GPER1-202ENST00000397088 ZEB1P37275 1124 aaPredicted RBP26.16■■□□□ 1.78
GPER1-202ENST00000397088 LOC105371045A0A1W2PR82 267 aa25.93■■□□□ 1.74
GPER1-202ENST00000397088 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
GPER1-202ENST00000397088 NEUROD1Q13562 356 aa25.67■■□□□ 1.7
GPER1-202ENST00000397088 ZCCHC6Q5VYS8 1495 aaKnown RBP25.62■■□□□ 1.69
GPER1-202ENST00000397088 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
GPER1-202ENST00000397088 GTF3C3Q9Y5Q9 886 aa25.58■■□□□ 1.69
GPER1-202ENST00000397088 ABCC9O60706 1549 aa25.52■■□□□ 1.68
GPER1-202ENST00000397088 CENPBP07199 599 aaPredicted RBP25.48■■□□□ 1.67
GPER1-202ENST00000397088 DIEXFQ68CQ4 756 aaKnown RBP25.18■■□□□ 1.62
GPER1-202ENST00000397088 CCER1Q8TC90 406 aaPredicted RBP24.99■■□□□ 1.59
GPER1-202ENST00000397088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.98■■□□□ 1.59
GPER1-202ENST00000397088 TTBK1Q5TCY1 1321 aaPredicted RBP24.98■■□□□ 1.59
GPER1-202ENST00000397088 TRIM41Q8WV44 630 aa24.82■■□□□ 1.56
GPER1-202ENST00000397088 NACADO15069 1562 aa24.8■■□□□ 1.56
GPER1-202ENST00000397088 FAM9AQ8IZU1 332 aaPredicted RBP24.79■■□□□ 1.56
GPER1-202ENST00000397088 YTHDC1Q96MU7 727 aaKnown RBP24.75■■□□□ 1.55
GPER1-202ENST00000397088 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
GPER1-202ENST00000397088 BCL11AQ9H165 835 aa24.65■■□□□ 1.54
GPER1-202ENST00000397088 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
GPER1-202ENST00000397088 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
GPER1-202ENST00000397088 ZNF316A6NFI3 1004 aaPredicted RBP24.63■■□□□ 1.53
GPER1-202ENST00000397088 ANP32EQ9BTT0 268 aa24.51■■□□□ 1.51
GPER1-202ENST00000397088 MIER1Q8N108 512 aa24.47■■□□□ 1.51
GPER1-202ENST00000397088 CLSPNQ9HAW4 1339 aa24.35■■□□□ 1.49
GPER1-202ENST00000397088 SUPT16HQ9Y5B9 1047 aaKnown RBP24.28■■□□□ 1.48
GPER1-202ENST00000397088 RSF1Q96T23 1441 aaPredicted RBP24.28■■□□□ 1.48
GPER1-202ENST00000397088 TSHZ2Q9NRE2 1034 aa24.27■■□□□ 1.48
GPER1-202ENST00000397088 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
GPER1-202ENST00000397088 CSRNP3Q8WYN3 585 aa24.21■■□□□ 1.47
GPER1-202ENST00000397088 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
GPER1-202ENST00000397088 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
GPER1-202ENST00000397088 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
GPER1-202ENST00000397088 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
GPER1-202ENST00000397088 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
GPER1-202ENST00000397088 PRKCSHP14314 528 aaPredicted RBP23.83■■□□□ 1.41
GPER1-202ENST00000397088 HNRNPUL2Q1KMD3 747 aaKnown RBP23.75■■□□□ 1.39
GPER1-202ENST00000397088 TNIKQ9UKE5 1360 aa23.7■■□□□ 1.38
GPER1-202ENST00000397088 MROH2BQ7Z745 1585 aa23.68■■□□□ 1.38
GPER1-202ENST00000397088 BCANQ96GW7 911 aa23.67■■□□□ 1.38
GPER1-202ENST00000397088 RBM19Q9Y4C8 960 aaKnown RBP23.67■■□□□ 1.38
GPER1-202ENST00000397088 FKBP8Q14318 412 aa23.57■■□□□ 1.36
GPER1-202ENST00000397088 BAZ1AQ9NRL2 1556 aaPredicted RBP23.56■■□□□ 1.36
GPER1-202ENST00000397088 SMARCA4P51532 1647 aa23.51■■□□□ 1.35
GPER1-202ENST00000397088 EIF4G1Q04637 1599 aaKnown RBP23.51■■□□□ 1.35
GPER1-202ENST00000397088 UBTFP17480 764 aaKnown RBP23.51■■□□□ 1.35
GPER1-202ENST00000397088 WIZO95785 1651 aa23.49■■□□□ 1.35
GPER1-202ENST00000397088 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
GPER1-202ENST00000397088 MSH5O43196 834 aa23.46■■□□□ 1.35
GPER1-202ENST00000397088 ERICH6Q7L0X2 663 aa23.44■■□□□ 1.34
GPER1-202ENST00000397088 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
GPER1-202ENST00000397088 NEFLP07196 543 aa23.41■■□□□ 1.34
GPER1-202ENST00000397088 SOGA1O94964 1423 aa23.41■■□□□ 1.34
GPER1-202ENST00000397088 KCNH8Q96L42 1107 aa23.41■■□□□ 1.34
GPER1-202ENST00000397088 EEA1Q15075 1411 aa23.37■■□□□ 1.33
GPER1-202ENST00000397088 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
GPER1-202ENST00000397088 GOLGA3Q08378 1498 aa23.34■■□□□ 1.33
GPER1-202ENST00000397088 ITGAEP38570 1179 aa23.31■■□□□ 1.32
GPER1-202ENST00000397088 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
GPER1-202ENST00000397088 MYT1LQ9UL68 1186 aa23.3■■□□□ 1.32
GPER1-202ENST00000397088 APLP2Q06481 763 aa23.26■■□□□ 1.31
GPER1-202ENST00000397088 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
GPER1-202ENST00000397088 VPS8Q8N3P4 1428 aa23.19■■□□□ 1.3
GPER1-202ENST00000397088 DEKP35659 375 aaKnown RBP23.18■■□□□ 1.3
GPER1-202ENST00000397088 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
GPER1-202ENST00000397088 CLIP1P30622 1438 aa23.16■■□□□ 1.3
GPER1-202ENST00000397088 PEG3Q9GZU2 1588 aa23.13■■□□□ 1.29
GPER1-202ENST00000397088 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
GPER1-202ENST00000397088 CDK11AQ9UQ88 783 aaPredicted RBP23.1■■□□□ 1.29
GPER1-202ENST00000397088 SMARCA2P51531 1590 aa23.08■■□□□ 1.29
GPER1-202ENST00000397088 ANO8Q9HCE9 1232 aaPredicted RBP23.07■■□□□ 1.28
GPER1-202ENST00000397088 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
GPER1-202ENST00000397088 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
GPER1-202ENST00000397088 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
GPER1-202ENST00000397088 DDX10Q13206 875 aaKnown RBP23.03■■□□□ 1.28
GPER1-202ENST00000397088 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
GPER1-202ENST00000397088 KIF21BO75037 1637 aa22.98■■□□□ 1.27
GPER1-202ENST00000397088 CCER2I3L3R5 266 aa22.96■■□□□ 1.27
GPER1-202ENST00000397088 NCAPD3P42695 1498 aa22.94■■□□□ 1.26
GPER1-202ENST00000397088 ERICH6BQ5W0A0 696 aa22.92■■□□□ 1.26
GPER1-202ENST00000397088 PPP1R15AO75807 674 aaPredicted RBP22.89■■□□□ 1.26
GPER1-202ENST00000397088 ANP32CO43423 234 aa22.87■■□□□ 1.25
GPER1-202ENST00000397088 CUX2O14529 1486 aa22.87■■□□□ 1.25
GPER1-202ENST00000397088 HMGXB3Q12766 1538 aa22.86■■□□□ 1.25
GPER1-202ENST00000397088 SALL2Q9Y467 1007 aaPredicted RBP22.84■■□□□ 1.25
GPER1-202ENST00000397088 RANGAP1P46060 587 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms