RNA–Protein interactions for RNA: ENST00000397029.7

PPARG-210, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 3

Gene PPARG, Length 686 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-210ENST00000397029 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
PPARG-210ENST00000397029 CCDC180Q9P1Z9 1646 aa28.98■■■□□ 2.23
PPARG-210ENST00000397029 ABCC9O60706 1549 aa28.64■■■□□ 2.17
PPARG-210ENST00000397029 RB1CC1Q8TDY2 1594 aa27.38■■□□□ 1.97
PPARG-210ENST00000397029 NACADO15069 1562 aa27.24■■□□□ 1.95
PPARG-210ENST00000397029 MYO15BQ96JP2 1530 aa26.97■■□□□ 1.91
PPARG-210ENST00000397029 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
PPARG-210ENST00000397029 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
PPARG-210ENST00000397029 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
PPARG-210ENST00000397029 DCAF1Q9Y4B6 1507 aa26.71■■□□□ 1.87
PPARG-210ENST00000397029 BICRAQ9NZM4 1560 aa26.68■■□□□ 1.86
PPARG-210ENST00000397029 DNAJC5BQ9UF47 199 aa26.65■■□□□ 1.86
PPARG-210ENST00000397029 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
PPARG-210ENST00000397029 SCRIBQ14160 1630 aa26.37■■□□□ 1.81
PPARG-210ENST00000397029 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
PPARG-210ENST00000397029 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.74
PPARG-210ENST00000397029 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
PPARG-210ENST00000397029 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
PPARG-210ENST00000397029 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
PPARG-210ENST00000397029 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
PPARG-210ENST00000397029 SMARCA4P51532 1647 aa25.2■■□□□ 1.62
PPARG-210ENST00000397029 NCAPD3P42695 1498 aa25.13■■□□□ 1.61
PPARG-210ENST00000397029 ATAD2BQ9ULI0 1458 aa25.1■■□□□ 1.61
PPARG-210ENST00000397029 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
PPARG-210ENST00000397029 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
PPARG-210ENST00000397029 HMGXB3Q12766 1538 aa25.03■■□□□ 1.6
PPARG-210ENST00000397029 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
PPARG-210ENST00000397029 MROH2BQ7Z745 1585 aa24.92■■□□□ 1.58
PPARG-210ENST00000397029 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
PPARG-210ENST00000397029 NESP48681 1621 aa24.72■■□□□ 1.55
PPARG-210ENST00000397029 WIZO95785 1651 aa24.66■■□□□ 1.54
PPARG-210ENST00000397029 ERCC6Q03468 1493 aa24.65■■□□□ 1.54
PPARG-210ENST00000397029 CUX2O14529 1486 aa24.59■■□□□ 1.53
PPARG-210ENST00000397029 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
PPARG-210ENST00000397029 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
PPARG-210ENST00000397029 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
PPARG-210ENST00000397029 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
PPARG-210ENST00000397029 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
PPARG-210ENST00000397029 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
PPARG-210ENST00000397029 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
PPARG-210ENST00000397029 DNAJC5Q9H3Z4 198 aa24.23■■□□□ 1.47
PPARG-210ENST00000397029 MRC2Q9UBG0 1479 aa24.17■■□□□ 1.46
PPARG-210ENST00000397029 WDR62O43379 1518 aa24.16■■□□□ 1.46
PPARG-210ENST00000397029 CFTRP13569 1480 aa24.16■■□□□ 1.46
PPARG-210ENST00000397029 CEP164Q9UPV0 1460 aa24.1■■□□□ 1.45
PPARG-210ENST00000397029 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
PPARG-210ENST00000397029 PRDM2Q13029 1718 aa24.09■■□□□ 1.45
PPARG-210ENST00000397029 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
PPARG-210ENST00000397029 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
PPARG-210ENST00000397029 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
PPARG-210ENST00000397029 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
PPARG-210ENST00000397029 IFT140Q96RY7 1462 aa23.6■■□□□ 1.37
PPARG-210ENST00000397029 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
PPARG-210ENST00000397029 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
PPARG-210ENST00000397029 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
PPARG-210ENST00000397029 EIF4G3O43432 1585 aaKnown RBP23.53■■□□□ 1.36
PPARG-210ENST00000397029 POLA1P09884 1462 aaPredicted RBP23.48■■□□□ 1.35
PPARG-210ENST00000397029 CUX1P39880 1505 aa23.4■■□□□ 1.34
PPARG-210ENST00000397029 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
PPARG-210ENST00000397029 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
PPARG-210ENST00000397029 OSCARQ8IYS5 282 aa23.35■■□□□ 1.33
PPARG-210ENST00000397029 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.331e-6■■■■□ 26.2
PPARG-210ENST00000397029 FGD5Q6ZNL6 1462 aa23.35■■□□□ 1.33
PPARG-210ENST00000397029 CHD1O14646 1710 aa23.34■■□□□ 1.33
PPARG-210ENST00000397029 WDR97A6NE52 1622 aa23.31■■□□□ 1.32
PPARG-210ENST00000397029 SOGA1O94964 1423 aa23.27■■□□□ 1.32
PPARG-210ENST00000397029 RIMBP3CA6NJZ7 1639 aa23.25■■□□□ 1.31
PPARG-210ENST00000397029 RIMBP3BA6NNM3 1639 aa23.25■■□□□ 1.31
PPARG-210ENST00000397029 RIMBP3Q9UFD9 1639 aa23.25■■□□□ 1.31
PPARG-210ENST00000397029 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
PPARG-210ENST00000397029 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
PPARG-210ENST00000397029 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
PPARG-210ENST00000397029 ARHGEF11O15085 1522 aa23.16■■□□□ 1.3
PPARG-210ENST00000397029 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
PPARG-210ENST00000397029 BIVM-ERCC5R4GMW8 1640 aa23.13■■□□□ 1.29
PPARG-210ENST00000397029 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
PPARG-210ENST00000397029 ABCA10Q8WWZ4 1543 aa23.1■■□□□ 1.29
PPARG-210ENST00000397029 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
PPARG-210ENST00000397029 TOP2BQ02880 1626 aa23.09■■□□□ 1.29
PPARG-210ENST00000397029 GRIN2BQ13224 1484 aa23.09■■□□□ 1.29
PPARG-210ENST00000397029 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
PPARG-210ENST00000397029 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
PPARG-210ENST00000397029 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
PPARG-210ENST00000397029 WRNQ14191 1432 aaPredicted RBP eCLIP23.01■■□□□ 1.27
PPARG-210ENST00000397029 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
PPARG-210ENST00000397029 FBLN2P98095 1184 aa23■■□□□ 1.27
PPARG-210ENST00000397029 ARAP1Q96P48 1450 aa22.97■■□□□ 1.27
PPARG-210ENST00000397029 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
PPARG-210ENST00000397029 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
PPARG-210ENST00000397029 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
PPARG-210ENST00000397029 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
PPARG-210ENST00000397029 CEP170Q5SW79 1584 aa22.8■■□□□ 1.24
PPARG-210ENST00000397029 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
PPARG-210ENST00000397029 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
PPARG-210ENST00000397029 NUP160Q12769 1436 aa22.75■■□□□ 1.23
PPARG-210ENST00000397029 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
PPARG-210ENST00000397029 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
PPARG-210ENST00000397029 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
PPARG-210ENST00000397029 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
PPARG-210ENST00000397029 CUL7Q14999 1698 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms