RNA–Protein interactions for RNA: ENST00000397026.6

PPARG-209, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 5 BASIC

Gene PPARG, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-209ENST00000397026 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
PPARG-209ENST00000397026 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
PPARG-209ENST00000397026 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
PPARG-209ENST00000397026 ABCC9O60706 1549 aa17.18■□□□□ 0.34
PPARG-209ENST00000397026 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
PPARG-209ENST00000397026 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
PPARG-209ENST00000397026 DCAF1Q9Y4B6 1507 aa16.81■□□□□ 0.28
PPARG-209ENST00000397026 NACADO15069 1562 aa16.63■□□□□ 0.25
PPARG-209ENST00000397026 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
PPARG-209ENST00000397026 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
PPARG-209ENST00000397026 RB1CC1Q8TDY2 1594 aa16.54■□□□□ 0.24
PPARG-209ENST00000397026 UNC13AQ9UPW8 1703 aa16.46■□□□□ 0.23
PPARG-209ENST00000397026 BICRAQ9NZM4 1560 aa16.22■□□□□ 0.19
PPARG-209ENST00000397026 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
PPARG-209ENST00000397026 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.17
PPARG-209ENST00000397026 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
PPARG-209ENST00000397026 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
PPARG-209ENST00000397026 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
PPARG-209ENST00000397026 WIZO95785 1651 aa15.84■□□□□ 0.13
PPARG-209ENST00000397026 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
PPARG-209ENST00000397026 BAZ1AQ9NRL2 1556 aaPredicted RBP15.78■□□□□ 0.12
PPARG-209ENST00000397026 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
PPARG-209ENST00000397026 ATAD2BQ9ULI0 1458 aa15.57■□□□□ 0.08
PPARG-209ENST00000397026 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
PPARG-209ENST00000397026 TOP2AP11388 1531 aaKnown RBP15.51■□□□□ 0.07
PPARG-209ENST00000397026 CC2D2AQ9P2K1 1620 aa15.51■□□□□ 0.07
PPARG-209ENST00000397026 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
PPARG-209ENST00000397026 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
PPARG-209ENST00000397026 CCDC88BA6NC98 1476 aa15.42■□□□□ 0.06
PPARG-209ENST00000397026 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
PPARG-209ENST00000397026 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
PPARG-209ENST00000397026 HMGXB3Q12766 1538 aa15.34■□□□□ 0.05
PPARG-209ENST00000397026 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.04
PPARG-209ENST00000397026 ABCC8Q09428 1581 aa15.17■□□□□ 0.02
PPARG-209ENST00000397026 NESP48681 1621 aa15.11■□□□□ 0.01
PPARG-209ENST00000397026 CFTRP13569 1480 aa15.04■□□□□ -0
PPARG-209ENST00000397026 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
PPARG-209ENST00000397026 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
PPARG-209ENST00000397026 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
PPARG-209ENST00000397026 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
PPARG-209ENST00000397026 WRNQ14191 1432 aaPredicted RBP eCLIP14.91□□□□□ -0.02
PPARG-209ENST00000397026 KIF21AQ7Z4S6 1674 aa14.9□□□□□ -0.02
PPARG-209ENST00000397026 CUX1P39880 1505 aa14.89□□□□□ -0.03
PPARG-209ENST00000397026 FAM9AQ8IZU1 332 aaPredicted RBP14.88□□□□□ -0.03
PPARG-209ENST00000397026 FANCD2Q9BXW9 1451 aa14.87□□□□□ -0.03
PPARG-209ENST00000397026 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
PPARG-209ENST00000397026 RUSC2Q8N2Y8 1516 aa14.84□□□□□ -0.03
PPARG-209ENST00000397026 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
PPARG-209ENST00000397026 SOGA1O94964 1423 aa14.82□□□□□ -0.04
PPARG-209ENST00000397026 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
PPARG-209ENST00000397026 LOC105371045A0A1W2PR82 267 aa14.81□□□□□ -0.04
PPARG-209ENST00000397026 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
PPARG-209ENST00000397026 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
PPARG-209ENST00000397026 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
PPARG-209ENST00000397026 TOPBP1Q92547 1522 aa14.72□□□□□ -0.05
PPARG-209ENST00000397026 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
PPARG-209ENST00000397026 FGD5Q6ZNL6 1462 aa14.71□□□□□ -0.06
PPARG-209ENST00000397026 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
PPARG-209ENST00000397026 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
PPARG-209ENST00000397026 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
PPARG-209ENST00000397026 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
PPARG-209ENST00000397026 THOC2Q8NI27 1593 aaKnown RBP14.62□□□□□ -0.07
PPARG-209ENST00000397026 MRC2Q9UBG0 1479 aa14.6□□□□□ -0.07
PPARG-209ENST00000397026 CUX2O14529 1486 aa14.57□□□□□ -0.08
PPARG-209ENST00000397026 WDR97A6NE52 1622 aa14.56□□□□□ -0.08
PPARG-209ENST00000397026 WDR62O43379 1518 aa14.56□□□□□ -0.08
PPARG-209ENST00000397026 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
PPARG-209ENST00000397026 TARBP1Q13395 1621 aaKnown RBP14.54□□□□□ -0.08
PPARG-209ENST00000397026 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.09
PPARG-209ENST00000397026 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
PPARG-209ENST00000397026 ZNF608Q9ULD9 1512 aaPredicted RBP14.5□□□□□ -0.09
PPARG-209ENST00000397026 RAPGEF2Q9Y4G8 1499 aa14.49□□□□□ -0.09
PPARG-209ENST00000397026 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
PPARG-209ENST00000397026 EEA1Q15075 1411 aa14.47□□□□□ -0.09
PPARG-209ENST00000397026 IGF1RP08069 1367 aa14.47□□□□□ -0.09
PPARG-209ENST00000397026 AQRO60306 1485 aaKnown RBP eCLIP14.46□□□□□ -0.093e-6■■□□□ 13.8
PPARG-209ENST00000397026 ABCA5Q8WWZ7 1642 aa14.46□□□□□ -0.09
PPARG-209ENST00000397026 KIF21BO75037 1637 aa14.44□□□□□ -0.1
PPARG-209ENST00000397026 PRXQ9BXM0 1461 aa14.43□□□□□ -0.1
PPARG-209ENST00000397026 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
PPARG-209ENST00000397026 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
PPARG-209ENST00000397026 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
PPARG-209ENST00000397026 UBTFP17480 764 aaKnown RBP14.38□□□□□ -0.11
PPARG-209ENST00000397026 EIF4G3O43432 1585 aaKnown RBP14.38□□□□□ -0.11
PPARG-209ENST00000397026 IFT140Q96RY7 1462 aa14.37□□□□□ -0.11
PPARG-209ENST00000397026 RANGAP1P46060 587 aaPredicted RBP14.37□□□□□ -0.11
PPARG-209ENST00000397026 CARMIL1Q5VZK9 1371 aa14.35□□□□□ -0.11
PPARG-209ENST00000397026 ERICH3Q5RHP9 1530 aa14.32□□□□□ -0.12
PPARG-209ENST00000397026 TNIKQ9UKE5 1360 aa14.32□□□□□ -0.12
PPARG-209ENST00000397026 CEP162Q5TB80 1403 aa14.31□□□□□ -0.12
PPARG-209ENST00000397026 CUL7Q14999 1698 aa14.29□□□□□ -0.12
PPARG-209ENST00000397026 ADAMTS12P58397 1594 aa14.27□□□□□ -0.12
PPARG-209ENST00000397026 SNAPC4Q5SXM2 1469 aa14.27□□□□□ -0.12
PPARG-209ENST00000397026 GRIN2BQ13224 1484 aa14.26□□□□□ -0.13
PPARG-209ENST00000397026 CTTNBP2Q8WZ74 1663 aa14.2□□□□□ -0.14
PPARG-209ENST00000397026 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
PPARG-209ENST00000397026 CLIP1P30622 1438 aa14.19□□□□□ -0.14
PPARG-209ENST00000397026 FHAD1B1AJZ9 1412 aa14.19□□□□□ -0.14
PPARG-209ENST00000397026 FBLN2P98095 1184 aa14.16□□□□□ -0.14
PPARG-209ENST00000397026 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms