RNA–Protein interactions for RNA: ENST00000396864.7

IRF9-202, Transcript of interferon regulatory factor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF9, Length 1,838 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-202ENST00000396864 NISCHQ9Y2I1 1504 aa33.59■■■□□ 2.97
IRF9-202ENST00000396864 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
IRF9-202ENST00000396864 ABCC9O60706 1549 aa28.74■■■□□ 2.19
IRF9-202ENST00000396864 ZCCHC6Q5VYS8 1495 aaKnown RBP28.18■■■□□ 2.1
IRF9-202ENST00000396864 DCAF8L2P0C7V8 631 aa28.02■■■□□ 2.08
IRF9-202ENST00000396864 DCAF1Q9Y4B6 1507 aa27.74■■■□□ 2.03
IRF9-202ENST00000396864 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
IRF9-202ENST00000396864 NACADO15069 1562 aa27.62■■■□□ 2.01
IRF9-202ENST00000396864 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.99
IRF9-202ENST00000396864 SHROOM4Q9ULL8 1493 aa27.36■■□□□ 1.97
IRF9-202ENST00000396864 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
IRF9-202ENST00000396864 UNC13AQ9UPW8 1703 aa27.09■■□□□ 1.93
IRF9-202ENST00000396864 PABPN1Q86U42 306 aaKnown RBP eCLIP26.95■■□□□ 1.91
IRF9-202ENST00000396864 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
IRF9-202ENST00000396864 SUPT5HO00267 1087 aaKnown RBP26.25■■□□□ 1.79
IRF9-202ENST00000396864 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.78
IRF9-202ENST00000396864 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
IRF9-202ENST00000396864 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
IRF9-202ENST00000396864 RSF1Q96T23 1441 aaPredicted RBP26.02■■□□□ 1.76
IRF9-202ENST00000396864 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
IRF9-202ENST00000396864 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
IRF9-202ENST00000396864 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
IRF9-202ENST00000396864 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
IRF9-202ENST00000396864 WIZO95785 1651 aa25.72■■□□□ 1.71
IRF9-202ENST00000396864 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
IRF9-202ENST00000396864 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
IRF9-202ENST00000396864 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.67
IRF9-202ENST00000396864 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
IRF9-202ENST00000396864 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
IRF9-202ENST00000396864 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
IRF9-202ENST00000396864 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
IRF9-202ENST00000396864 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
IRF9-202ENST00000396864 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
IRF9-202ENST00000396864 NESP48681 1621 aa24.96■■□□□ 1.59
IRF9-202ENST00000396864 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
IRF9-202ENST00000396864 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
IRF9-202ENST00000396864 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
IRF9-202ENST00000396864 CFTRP13569 1480 aa24.71■■□□□ 1.55
IRF9-202ENST00000396864 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
IRF9-202ENST00000396864 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
IRF9-202ENST00000396864 ABCC8Q09428 1581 aa24.64■■□□□ 1.53
IRF9-202ENST00000396864 PDS5BQ9NTI5 1447 aa24.63■■□□□ 1.53
IRF9-202ENST00000396864 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
IRF9-202ENST00000396864 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
IRF9-202ENST00000396864 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
IRF9-202ENST00000396864 WRNQ14191 1432 aaPredicted RBP eCLIP24.48■■□□□ 1.51
IRF9-202ENST00000396864 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
IRF9-202ENST00000396864 SYNJ1O43426 1573 aa24.39■■□□□ 1.5
IRF9-202ENST00000396864 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.49
IRF9-202ENST00000396864 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
IRF9-202ENST00000396864 CUX1P39880 1505 aa24.28■■□□□ 1.48
IRF9-202ENST00000396864 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
IRF9-202ENST00000396864 WDR62O43379 1518 aa24.27■■□□□ 1.48
IRF9-202ENST00000396864 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
IRF9-202ENST00000396864 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
IRF9-202ENST00000396864 TOPBP1Q92547 1522 aa24.21■■□□□ 1.47
IRF9-202ENST00000396864 CUX2O14529 1486 aa24.2■■□□□ 1.46
IRF9-202ENST00000396864 DNMBPQ6XZF7 1577 aa24.18■■□□□ 1.46
IRF9-202ENST00000396864 SOGA1O94964 1423 aa24.17■■□□□ 1.46
IRF9-202ENST00000396864 LOC105371045A0A1W2PR82 267 aa24.1■■□□□ 1.45
IRF9-202ENST00000396864 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
IRF9-202ENST00000396864 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
IRF9-202ENST00000396864 POLA1P09884 1462 aaPredicted RBP24.04■■□□□ 1.44
IRF9-202ENST00000396864 EEA1Q15075 1411 aa24.02■■□□□ 1.44
IRF9-202ENST00000396864 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
IRF9-202ENST00000396864 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
IRF9-202ENST00000396864 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
IRF9-202ENST00000396864 EHMT2Q96KQ7 1210 aa23.93■■□□□ 1.42
IRF9-202ENST00000396864 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
IRF9-202ENST00000396864 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
IRF9-202ENST00000396864 KIF27Q86VH2 1401 aa23.88■■□□□ 1.41
IRF9-202ENST00000396864 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
IRF9-202ENST00000396864 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.43e-7■■■■■ 33.8
IRF9-202ENST00000396864 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
IRF9-202ENST00000396864 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
IRF9-202ENST00000396864 WDR97A6NE52 1622 aa23.78■■□□□ 1.4
IRF9-202ENST00000396864 KIF21BO75037 1637 aa23.72■■□□□ 1.39
IRF9-202ENST00000396864 GOLGA3Q08378 1498 aa23.71■■□□□ 1.39
IRF9-202ENST00000396864 IGF1RP08069 1367 aa23.7■■□□□ 1.39
IRF9-202ENST00000396864 PRXQ9BXM0 1461 aa23.69■■□□□ 1.38
IRF9-202ENST00000396864 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
IRF9-202ENST00000396864 RAPGEF2Q9Y4G8 1499 aa23.67■■□□□ 1.38
IRF9-202ENST00000396864 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
IRF9-202ENST00000396864 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.38
IRF9-202ENST00000396864 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
IRF9-202ENST00000396864 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
IRF9-202ENST00000396864 GRIN2BQ13224 1484 aa23.59■■□□□ 1.37
IRF9-202ENST00000396864 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
IRF9-202ENST00000396864 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
IRF9-202ENST00000396864 FBLN2P98095 1184 aa23.58■■□□□ 1.37
IRF9-202ENST00000396864 CARMIL1Q5VZK9 1371 aa23.57■■□□□ 1.36
IRF9-202ENST00000396864 CEP162Q5TB80 1403 aa23.49■■□□□ 1.35
IRF9-202ENST00000396864 MAGI1Q96QZ7 1491 aaPredicted RBP23.47■■□□□ 1.35
IRF9-202ENST00000396864 CHD1O14646 1710 aa23.47■■□□□ 1.35
IRF9-202ENST00000396864 CUL7Q14999 1698 aa23.47■■□□□ 1.35
IRF9-202ENST00000396864 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
IRF9-202ENST00000396864 ADAMTS12P58397 1594 aa23.43■■□□□ 1.34
IRF9-202ENST00000396864 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
IRF9-202ENST00000396864 FHAD1B1AJZ9 1412 aa23.37■■□□□ 1.33
IRF9-202ENST00000396864 RANGAP1P46060 587 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms