RNA–Protein interactions for RNA: ENST00000396737.6

PPM1N-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 2 BASIC

Gene PPM1N, Length 872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-203ENST00000396737 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
PPM1N-203ENST00000396737 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
PPM1N-203ENST00000396737 ABCC9O60706 1549 aa28.92■■■□□ 2.22
PPM1N-203ENST00000396737 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
PPM1N-203ENST00000396737 NACADO15069 1562 aa27.53■■■□□ 2
PPM1N-203ENST00000396737 DCAF8L2P0C7V8 631 aa27.38■■□□□ 1.97
PPM1N-203ENST00000396737 ZCCHC6Q5VYS8 1495 aaKnown RBP27.31■■□□□ 1.96
PPM1N-203ENST00000396737 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.96
PPM1N-203ENST00000396737 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
PPM1N-203ENST00000396737 DCAF1Q9Y4B6 1507 aa27.08■■□□□ 1.93
PPM1N-203ENST00000396737 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
PPM1N-203ENST00000396737 PABPN1Q86U42 306 aaKnown RBP eCLIP26.95■■□□□ 1.9
PPM1N-203ENST00000396737 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
PPM1N-203ENST00000396737 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
PPM1N-203ENST00000396737 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
PPM1N-203ENST00000396737 AEBP2Q6ZN18 517 aaPredicted RBP26.41■■□□□ 1.82
PPM1N-203ENST00000396737 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
PPM1N-203ENST00000396737 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
PPM1N-203ENST00000396737 CECR2Q9BXF3 1484 aa25.97■■□□□ 1.75
PPM1N-203ENST00000396737 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
PPM1N-203ENST00000396737 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
PPM1N-203ENST00000396737 ATAD2BQ9ULI0 1458 aa25.43■■□□□ 1.66
PPM1N-203ENST00000396737 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
PPM1N-203ENST00000396737 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
PPM1N-203ENST00000396737 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
PPM1N-203ENST00000396737 SMARCA2P51531 1590 aa25.33■■□□□ 1.65
PPM1N-203ENST00000396737 HMGXB3Q12766 1538 aa25.3■■□□□ 1.64
PPM1N-203ENST00000396737 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
PPM1N-203ENST00000396737 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
PPM1N-203ENST00000396737 WIZO95785 1651 aa25.1■■□□□ 1.61
PPM1N-203ENST00000396737 NESP48681 1621 aa25.02■■□□□ 1.6
PPM1N-203ENST00000396737 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
PPM1N-203ENST00000396737 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
PPM1N-203ENST00000396737 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
PPM1N-203ENST00000396737 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
PPM1N-203ENST00000396737 TOP2AP11388 1531 aaKnown RBP24.72■■□□□ 1.55
PPM1N-203ENST00000396737 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
PPM1N-203ENST00000396737 CUX2O14529 1486 aa24.67■■□□□ 1.54
PPM1N-203ENST00000396737 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.53
PPM1N-203ENST00000396737 PDS5BQ9NTI5 1447 aa24.54■■□□□ 1.52
PPM1N-203ENST00000396737 CFTRP13569 1480 aa24.48■■□□□ 1.51
PPM1N-203ENST00000396737 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
PPM1N-203ENST00000396737 MRC2Q9UBG0 1479 aa24.4■■□□□ 1.5
PPM1N-203ENST00000396737 FANCD2Q9BXW9 1451 aa24.39■■□□□ 1.5
PPM1N-203ENST00000396737 WDR62O43379 1518 aa24.38■■□□□ 1.49
PPM1N-203ENST00000396737 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
PPM1N-203ENST00000396737 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
PPM1N-203ENST00000396737 URB2Q14146 1524 aaKnown RBP24.25■■□□□ 1.47
PPM1N-203ENST00000396737 DNAJC5Q9H3Z4 198 aa24.21■■□□□ 1.47
PPM1N-203ENST00000396737 TOPBP1Q92547 1522 aa24.01■■□□□ 1.43
PPM1N-203ENST00000396737 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
PPM1N-203ENST00000396737 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.43
PPM1N-203ENST00000396737 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.42
PPM1N-203ENST00000396737 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
PPM1N-203ENST00000396737 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
PPM1N-203ENST00000396737 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
PPM1N-203ENST00000396737 POLA1P09884 1462 aaPredicted RBP23.8■■□□□ 1.4
PPM1N-203ENST00000396737 CUX1P39880 1505 aa23.79■■□□□ 1.4
PPM1N-203ENST00000396737 EIF4G3O43432 1585 aaKnown RBP23.78■■□□□ 1.4
PPM1N-203ENST00000396737 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
PPM1N-203ENST00000396737 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
PPM1N-203ENST00000396737 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.384e-7■■■■■ 31.4
PPM1N-203ENST00000396737 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
PPM1N-203ENST00000396737 SOGA1O94964 1423 aa23.61■■□□□ 1.37
PPM1N-203ENST00000396737 CHD1O14646 1710 aa23.58■■□□□ 1.37
PPM1N-203ENST00000396737 TDRD9Q8NDG6 1382 aaKnown RBP23.56■■□□□ 1.36
PPM1N-203ENST00000396737 SYNJ1O43426 1573 aa23.53■■□□□ 1.36
PPM1N-203ENST00000396737 OSCARQ8IYS5 282 aa23.53■■□□□ 1.36
PPM1N-203ENST00000396737 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
PPM1N-203ENST00000396737 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
PPM1N-203ENST00000396737 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
PPM1N-203ENST00000396737 SNAPC4Q5SXM2 1469 aa23.44■■□□□ 1.34
PPM1N-203ENST00000396737 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
PPM1N-203ENST00000396737 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
PPM1N-203ENST00000396737 ABCA10Q8WWZ4 1543 aa23.43■■□□□ 1.34
PPM1N-203ENST00000396737 RIMBP3CA6NJZ7 1639 aa23.39■■□□□ 1.33
PPM1N-203ENST00000396737 RIMBP3BA6NNM3 1639 aa23.39■■□□□ 1.33
PPM1N-203ENST00000396737 RIMBP3Q9UFD9 1639 aa23.39■■□□□ 1.33
PPM1N-203ENST00000396737 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
PPM1N-203ENST00000396737 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
PPM1N-203ENST00000396737 MAGI1Q96QZ7 1491 aaPredicted RBP23.33■■□□□ 1.33
PPM1N-203ENST00000396737 ARHGEF11O15085 1522 aa23.32■■□□□ 1.32
PPM1N-203ENST00000396737 FBLN2P98095 1184 aa23.31■■□□□ 1.32
PPM1N-203ENST00000396737 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
PPM1N-203ENST00000396737 CLASP1Q7Z460 1538 aa23.27■■□□□ 1.32
PPM1N-203ENST00000396737 SYNJ2O15056 1496 aa23.26■■□□□ 1.31
PPM1N-203ENST00000396737 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
PPM1N-203ENST00000396737 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
PPM1N-203ENST00000396737 ARAP1Q96P48 1450 aa23.14■■□□□ 1.29
PPM1N-203ENST00000396737 ERICH3Q5RHP9 1530 aa23.12■■□□□ 1.29
PPM1N-203ENST00000396737 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
PPM1N-203ENST00000396737 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
PPM1N-203ENST00000396737 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
PPM1N-203ENST00000396737 NUP160Q12769 1436 aa23.03■■□□□ 1.28
PPM1N-203ENST00000396737 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
PPM1N-203ENST00000396737 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
PPM1N-203ENST00000396737 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
PPM1N-203ENST00000396737 IGF1RP08069 1367 aa22.91■■□□□ 1.26
PPM1N-203ENST00000396737 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
PPM1N-203ENST00000396737 RUSC2Q8N2Y8 1516 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms