RNA–Protein interactions for RNA: ENST00000396063.5

GTF2A2-204, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTF2A2, Length 970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-204ENST00000396063 NISCHQ9Y2I1 1504 aa36.94■■■■□ 3.5
GTF2A2-204ENST00000396063 AEBP2Q6ZN18 517 aaPredicted RBP34■■■■□ 3.03
GTF2A2-204ENST00000396063 CCDC180Q9P1Z9 1646 aa33.13■■■□□ 2.89
GTF2A2-204ENST00000396063 ABCC9O60706 1549 aa32.99■■■□□ 2.87
GTF2A2-204ENST00000396063 CHIC1Q5VXU3 224 aa32.18■■■□□ 2.74
GTF2A2-204ENST00000396063 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
GTF2A2-204ENST00000396063 NACADO15069 1562 aa31.29■■■□□ 2.6
GTF2A2-204ENST00000396063 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
GTF2A2-204ENST00000396063 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
GTF2A2-204ENST00000396063 DNAJC5BQ9UF47 199 aa30.84■■■□□ 2.53
GTF2A2-204ENST00000396063 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
GTF2A2-204ENST00000396063 PABPN1Q86U42 306 aaKnown RBP eCLIP30.75■■■□□ 2.51
GTF2A2-204ENST00000396063 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
GTF2A2-204ENST00000396063 DCAF1Q9Y4B6 1507 aa30.52■■■□□ 2.48
GTF2A2-204ENST00000396063 BICRAQ9NZM4 1560 aa30.51■■■□□ 2.47
GTF2A2-204ENST00000396063 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
GTF2A2-204ENST00000396063 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
GTF2A2-204ENST00000396063 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
GTF2A2-204ENST00000396063 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
GTF2A2-204ENST00000396063 CECR2Q9BXF3 1484 aa29.72■■■□□ 2.35
GTF2A2-204ENST00000396063 NCAPD3P42695 1498 aa28.86■■■□□ 2.21
GTF2A2-204ENST00000396063 SENP3Q9H4L4 574 aaPredicted RBP28.83■■■□□ 2.21
GTF2A2-204ENST00000396063 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
GTF2A2-204ENST00000396063 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
GTF2A2-204ENST00000396063 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
GTF2A2-204ENST00000396063 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
GTF2A2-204ENST00000396063 HMGXB3Q12766 1538 aa28.65■■■□□ 2.18
GTF2A2-204ENST00000396063 PHF23Q9BUL5 403 aaPredicted RBP28.57■■■□□ 2.16
GTF2A2-204ENST00000396063 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
GTF2A2-204ENST00000396063 ERCC6Q03468 1493 aa28.51■■■□□ 2.15
GTF2A2-204ENST00000396063 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
GTF2A2-204ENST00000396063 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.15
GTF2A2-204ENST00000396063 CUX2O14529 1486 aa28.4■■■□□ 2.14
GTF2A2-204ENST00000396063 NESP48681 1621 aa28.36■■■□□ 2.13
GTF2A2-204ENST00000396063 DNAJC5Q9H3Z4 198 aa28.27■■■□□ 2.12
GTF2A2-204ENST00000396063 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
GTF2A2-204ENST00000396063 WIZO95785 1651 aa28.15■■■□□ 2.1
GTF2A2-204ENST00000396063 PDS5BQ9NTI5 1447 aa28.06■■■□□ 2.08
GTF2A2-204ENST00000396063 THOC2Q8NI27 1593 aaKnown RBP28.04■■■□□ 2.08
GTF2A2-204ENST00000396063 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
GTF2A2-204ENST00000396063 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.07
GTF2A2-204ENST00000396063 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
GTF2A2-204ENST00000396063 TOP2AP11388 1531 aaKnown RBP27.78■■■□□ 2.04
GTF2A2-204ENST00000396063 MRC2Q9UBG0 1479 aa27.78■■■□□ 2.04
GTF2A2-204ENST00000396063 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.03
GTF2A2-204ENST00000396063 WDR62O43379 1518 aa27.7■■■□□ 2.02
GTF2A2-204ENST00000396063 CFTRP13569 1480 aa27.7■■■□□ 2.02
GTF2A2-204ENST00000396063 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
GTF2A2-204ENST00000396063 PRDM2Q13029 1718 aa27.49■■□□□ 1.99
GTF2A2-204ENST00000396063 CCDC88BA6NC98 1476 aa27.48■■□□□ 1.99
GTF2A2-204ENST00000396063 URB2Q14146 1524 aaKnown RBP27.43■■□□□ 1.98
GTF2A2-204ENST00000396063 OSCARQ8IYS5 282 aa27.18■■□□□ 1.94
GTF2A2-204ENST00000396063 TOPBP1Q92547 1522 aa27.17■■□□□ 1.94
GTF2A2-204ENST00000396063 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
GTF2A2-204ENST00000396063 IFT140Q96RY7 1462 aa27.15■■□□□ 1.94
GTF2A2-204ENST00000396063 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
GTF2A2-204ENST00000396063 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
GTF2A2-204ENST00000396063 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
GTF2A2-204ENST00000396063 FOXD1Q16676 465 aa27.01■■□□□ 1.91
GTF2A2-204ENST00000396063 EIF4G3O43432 1585 aaKnown RBP26.94■■□□□ 1.9
GTF2A2-204ENST00000396063 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
GTF2A2-204ENST00000396063 POLA1P09884 1462 aaPredicted RBP26.88■■□□□ 1.89
GTF2A2-204ENST00000396063 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.892e-8■□□□□ 8.7
GTF2A2-204ENST00000396063 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
GTF2A2-204ENST00000396063 SOGA1O94964 1423 aa26.81■■□□□ 1.88
GTF2A2-204ENST00000396063 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
GTF2A2-204ENST00000396063 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
GTF2A2-204ENST00000396063 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
GTF2A2-204ENST00000396063 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
GTF2A2-204ENST00000396063 CHD1O14646 1710 aa26.76■■□□□ 1.87
GTF2A2-204ENST00000396063 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
GTF2A2-204ENST00000396063 CUX1P39880 1505 aa26.73■■□□□ 1.87
GTF2A2-204ENST00000396063 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
GTF2A2-204ENST00000396063 FBLN2P98095 1184 aa26.72■■□□□ 1.87
GTF2A2-204ENST00000396063 ARHGEF11O15085 1522 aa26.67■■□□□ 1.86
GTF2A2-204ENST00000396063 WDR97A6NE52 1622 aa26.67■■□□□ 1.86
GTF2A2-204ENST00000396063 SNAPC4Q5SXM2 1469 aa26.58■■□□□ 1.85
GTF2A2-204ENST00000396063 GRIN2BQ13224 1484 aa26.55■■□□□ 1.84
GTF2A2-204ENST00000396063 CHMP7Q8WUX9 453 aaPredicted RBP26.54■■□□□ 1.84
GTF2A2-204ENST00000396063 MAGI1Q96QZ7 1491 aaPredicted RBP26.54■■□□□ 1.84
GTF2A2-204ENST00000396063 CYB5RLQ6IPT4 315 aa26.52■■□□□ 1.84
GTF2A2-204ENST00000396063 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
GTF2A2-204ENST00000396063 PBRM1Q86U86 1689 aa26.47■■□□□ 1.83
GTF2A2-204ENST00000396063 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
GTF2A2-204ENST00000396063 SYNJ2O15056 1496 aa26.44■■□□□ 1.82
GTF2A2-204ENST00000396063 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
GTF2A2-204ENST00000396063 CLASP1Q7Z460 1538 aa26.4■■□□□ 1.82
GTF2A2-204ENST00000396063 ARAP1Q96P48 1450 aa26.4■■□□□ 1.82
GTF2A2-204ENST00000396063 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.82
GTF2A2-204ENST00000396063 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.81
GTF2A2-204ENST00000396063 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
GTF2A2-204ENST00000396063 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
GTF2A2-204ENST00000396063 TRHP20396 242 aaPredicted RBP26.22■■□□□ 1.79
GTF2A2-204ENST00000396063 GRIN2AQ12879 1464 aa26.19■■□□□ 1.78
GTF2A2-204ENST00000396063 ADAMTS12P58397 1594 aa26.18■■□□□ 1.78
GTF2A2-204ENST00000396063 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.77
GTF2A2-204ENST00000396063 FHAD1B1AJZ9 1412 aa26.14■■□□□ 1.77
GTF2A2-204ENST00000396063 CEP170Q5SW79 1584 aa26.08■■□□□ 1.77
GTF2A2-204ENST00000396063 NUP160Q12769 1436 aa26.08■■□□□ 1.77
GTF2A2-204ENST00000396063 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms