RNA–Protein interactions for RNA: ENST00000395959.3

AC004987.2-201, humanhuman

BASIC

Gene AC004987.2, Length 1,148 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.2-201ENST00000395959 NISCHQ9Y2I1 1504 aa37.51■■■■□ 3.6
AC004987.2-201ENST00000395959 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
AC004987.2-201ENST00000395959 ABCC9O60706 1549 aa31.61■■■□□ 2.65
AC004987.2-201ENST00000395959 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
AC004987.2-201ENST00000395959 DCAF8L2P0C7V8 631 aa31.13■■■□□ 2.57
AC004987.2-201ENST00000395959 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
AC004987.2-201ENST00000395959 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
AC004987.2-201ENST00000395959 NACADO15069 1562 aa30.92■■■□□ 2.54
AC004987.2-201ENST00000395959 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
AC004987.2-201ENST00000395959 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
AC004987.2-201ENST00000395959 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
AC004987.2-201ENST00000395959 UNC13AQ9UPW8 1703 aa29.92■■■□□ 2.38
AC004987.2-201ENST00000395959 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
AC004987.2-201ENST00000395959 PABPN1Q86U42 306 aaKnown RBP eCLIP29.71■■■□□ 2.35
AC004987.2-201ENST00000395959 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
AC004987.2-201ENST00000395959 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
AC004987.2-201ENST00000395959 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
AC004987.2-201ENST00000395959 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
AC004987.2-201ENST00000395959 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.22
AC004987.2-201ENST00000395959 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
AC004987.2-201ENST00000395959 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
AC004987.2-201ENST00000395959 PEG3Q9GZU2 1588 aa28.66■■■□□ 2.18
AC004987.2-201ENST00000395959 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
AC004987.2-201ENST00000395959 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
AC004987.2-201ENST00000395959 CC2D2AQ9P2K1 1620 aa28.61■■■□□ 2.17
AC004987.2-201ENST00000395959 WIZO95785 1651 aa28.58■■■□□ 2.17
AC004987.2-201ENST00000395959 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
AC004987.2-201ENST00000395959 BAZ1BQ9UIG0 1483 aaKnown RBP28.43■■■□□ 2.14
AC004987.2-201ENST00000395959 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
AC004987.2-201ENST00000395959 DNAJC5BQ9UF47 199 aa28.4■■■□□ 2.14
AC004987.2-201ENST00000395959 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
AC004987.2-201ENST00000395959 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
AC004987.2-201ENST00000395959 CADPSQ9ULU8 1353 aa27.76■■■□□ 2.03
AC004987.2-201ENST00000395959 CFTRP13569 1480 aa27.72■■■□□ 2.03
AC004987.2-201ENST00000395959 LAMC3Q9Y6N6 1575 aa27.63■■■□□ 2.01
AC004987.2-201ENST00000395959 NESP48681 1621 aa27.54■■■□□ 2
AC004987.2-201ENST00000395959 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
AC004987.2-201ENST00000395959 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
AC004987.2-201ENST00000395959 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
AC004987.2-201ENST00000395959 CEP164Q9UPV0 1460 aa27.29■■□□□ 1.96
AC004987.2-201ENST00000395959 ERCC6Q03468 1493 aa27.24■■□□□ 1.95
AC004987.2-201ENST00000395959 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
AC004987.2-201ENST00000395959 WRNQ14191 1432 aaPredicted RBP eCLIP27.21■■□□□ 1.95
AC004987.2-201ENST00000395959 KIF21AQ7Z4S6 1674 aa27.18■■□□□ 1.94
AC004987.2-201ENST00000395959 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
AC004987.2-201ENST00000395959 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
AC004987.2-201ENST00000395959 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
AC004987.2-201ENST00000395959 CUX1P39880 1505 aa27.06■■□□□ 1.92
AC004987.2-201ENST00000395959 URB2Q14146 1524 aaKnown RBP27.04■■□□□ 1.92
AC004987.2-201ENST00000395959 DNMBPQ6XZF7 1577 aa27.04■■□□□ 1.92
AC004987.2-201ENST00000395959 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
AC004987.2-201ENST00000395959 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
AC004987.2-201ENST00000395959 SYNJ1O43426 1573 aa27.01■■□□□ 1.92
AC004987.2-201ENST00000395959 BIVM-ERCC5R4GMW8 1640 aa26.99■■□□□ 1.91
AC004987.2-201ENST00000395959 WDR62O43379 1518 aa26.96■■□□□ 1.91
AC004987.2-201ENST00000395959 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
AC004987.2-201ENST00000395959 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
AC004987.2-201ENST00000395959 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
AC004987.2-201ENST00000395959 SOGA1O94964 1423 aa26.81■■□□□ 1.88
AC004987.2-201ENST00000395959 CUX2O14529 1486 aa26.72■■□□□ 1.87
AC004987.2-201ENST00000395959 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
AC004987.2-201ENST00000395959 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.87
AC004987.2-201ENST00000395959 ABCA10Q8WWZ4 1543 aa26.68■■□□□ 1.86
AC004987.2-201ENST00000395959 TARBP1Q13395 1621 aaKnown RBP26.64■■□□□ 1.85
AC004987.2-201ENST00000395959 KIF27Q86VH2 1401 aa26.63■■□□□ 1.85
AC004987.2-201ENST00000395959 EEA1Q15075 1411 aa26.61■■□□□ 1.85
AC004987.2-201ENST00000395959 TDRD9Q8NDG6 1382 aaKnown RBP26.54■■□□□ 1.84
AC004987.2-201ENST00000395959 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
AC004987.2-201ENST00000395959 RUSC2Q8N2Y8 1516 aa26.5■■□□□ 1.83
AC004987.2-201ENST00000395959 FAM9AQ8IZU1 332 aaPredicted RBP26.49■■□□□ 1.83
AC004987.2-201ENST00000395959 CSRNP3Q8WYN3 585 aa26.49■■□□□ 1.83
AC004987.2-201ENST00000395959 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
AC004987.2-201ENST00000395959 ZNF608Q9ULD9 1512 aaPredicted RBP26.46■■□□□ 1.83
AC004987.2-201ENST00000395959 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.82
AC004987.2-201ENST00000395959 ABCA5Q8WWZ7 1642 aa26.44■■□□□ 1.82
AC004987.2-201ENST00000395959 IGF1RP08069 1367 aa26.43■■□□□ 1.82
AC004987.2-201ENST00000395959 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
AC004987.2-201ENST00000395959 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
AC004987.2-201ENST00000395959 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
AC004987.2-201ENST00000395959 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
AC004987.2-201ENST00000395959 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
AC004987.2-201ENST00000395959 PRXQ9BXM0 1461 aa26.26■■□□□ 1.79
AC004987.2-201ENST00000395959 CUL7Q14999 1698 aa26.24■■□□□ 1.79
AC004987.2-201ENST00000395959 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
AC004987.2-201ENST00000395959 FHAD1B1AJZ9 1412 aa26.22■■□□□ 1.79
AC004987.2-201ENST00000395959 SNAPC4Q5SXM2 1469 aa26.2■■□□□ 1.78
AC004987.2-201ENST00000395959 RAPGEF2Q9Y4G8 1499 aa26.19■■□□□ 1.78
AC004987.2-201ENST00000395959 KIF21BO75037 1637 aa26.18■■□□□ 1.78
AC004987.2-201ENST00000395959 ADAMTS12P58397 1594 aa26.13■■□□□ 1.77
AC004987.2-201ENST00000395959 GOLGA3Q08378 1498 aa26.13■■□□□ 1.77
AC004987.2-201ENST00000395959 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
AC004987.2-201ENST00000395959 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
AC004987.2-201ENST00000395959 LOC105371045A0A1W2PR82 267 aa26.1■■□□□ 1.77
AC004987.2-201ENST00000395959 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
AC004987.2-201ENST00000395959 FBLN2P98095 1184 aa26.05■■□□□ 1.76
AC004987.2-201ENST00000395959 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
AC004987.2-201ENST00000395959 GRIN2AQ12879 1464 aa26.02■■□□□ 1.76
AC004987.2-201ENST00000395959 TNIKQ9UKE5 1360 aa25.97■■□□□ 1.75
AC004987.2-201ENST00000395959 DNAJC5Q9H3Z4 198 aa25.93■■□□□ 1.74
AC004987.2-201ENST00000395959 NUP160Q12769 1436 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms