RNA–Protein interactions for RNA: ENST00000395748.7

AREG-201, Transcript of amphiregulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AREG, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AREG-201ENST00000395748 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
AREG-201ENST00000395748 CCDC180Q9P1Z9 1646 aa26.71■■□□□ 1.87
AREG-201ENST00000395748 ABCC9O60706 1549 aa26.06■■□□□ 1.76
AREG-201ENST00000395748 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
AREG-201ENST00000395748 NACADO15069 1562 aa25.12■■□□□ 1.61
AREG-201ENST00000395748 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
AREG-201ENST00000395748 MYO15BQ96JP2 1530 aa24.97■■□□□ 1.59
AREG-201ENST00000395748 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
AREG-201ENST00000395748 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
AREG-201ENST00000395748 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
AREG-201ENST00000395748 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
AREG-201ENST00000395748 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
AREG-201ENST00000395748 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
AREG-201ENST00000395748 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
AREG-201ENST00000395748 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
AREG-201ENST00000395748 DNAJC5BQ9UF47 199 aa23.86■■□□□ 1.41
AREG-201ENST00000395748 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
AREG-201ENST00000395748 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
AREG-201ENST00000395748 CECR2Q9BXF3 1484 aa23.45■■□□□ 1.34
AREG-201ENST00000395748 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
AREG-201ENST00000395748 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
AREG-201ENST00000395748 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
AREG-201ENST00000395748 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
AREG-201ENST00000395748 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
AREG-201ENST00000395748 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
AREG-201ENST00000395748 MROH2BQ7Z745 1585 aa23.05■■□□□ 1.28
AREG-201ENST00000395748 PEG3Q9GZU2 1588 aa23.05■■□□□ 1.28
AREG-201ENST00000395748 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
AREG-201ENST00000395748 BAZ1BQ9UIG0 1483 aaKnown RBP22.97■■□□□ 1.27
AREG-201ENST00000395748 WIZO95785 1651 aa22.81■■□□□ 1.24
AREG-201ENST00000395748 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
AREG-201ENST00000395748 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
AREG-201ENST00000395748 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
AREG-201ENST00000395748 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
AREG-201ENST00000395748 NESP48681 1621 aa22.51■■□□□ 1.19
AREG-201ENST00000395748 CADPSQ9ULU8 1353 aa22.48■■□□□ 1.19
AREG-201ENST00000395748 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
AREG-201ENST00000395748 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
AREG-201ENST00000395748 CFTRP13569 1480 aa22.32■■□□□ 1.16
AREG-201ENST00000395748 CUX2O14529 1486 aa22.31■■□□□ 1.16
AREG-201ENST00000395748 KIF21AQ7Z4S6 1674 aa22.29■■□□□ 1.16
AREG-201ENST00000395748 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
AREG-201ENST00000395748 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
AREG-201ENST00000395748 FANCD2Q9BXW9 1451 aa22.2■■□□□ 1.14
AREG-201ENST00000395748 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
AREG-201ENST00000395748 PRDM2Q13029 1718 aa22.2■■□□□ 1.14
AREG-201ENST00000395748 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
AREG-201ENST00000395748 WDR62O43379 1518 aa22.07■■□□□ 1.12
AREG-201ENST00000395748 ABCC8Q09428 1581 aa21.95■■□□□ 1.1
AREG-201ENST00000395748 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
AREG-201ENST00000395748 TOPBP1Q92547 1522 aa21.84■■□□□ 1.09
AREG-201ENST00000395748 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
AREG-201ENST00000395748 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
AREG-201ENST00000395748 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
AREG-201ENST00000395748 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
AREG-201ENST00000395748 CUX1P39880 1505 aa21.63■■□□□ 1.05
AREG-201ENST00000395748 SOGA1O94964 1423 aa21.59■■□□□ 1.05
AREG-201ENST00000395748 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.05
AREG-201ENST00000395748 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.04
AREG-201ENST00000395748 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
AREG-201ENST00000395748 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
AREG-201ENST00000395748 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.03
AREG-201ENST00000395748 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
AREG-201ENST00000395748 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
AREG-201ENST00000395748 TOP2BQ02880 1626 aa21.49■■□□□ 1.03
AREG-201ENST00000395748 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
AREG-201ENST00000395748 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.03
AREG-201ENST00000395748 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
AREG-201ENST00000395748 SYNJ1O43426 1573 aa21.42■■□□□ 1.02
AREG-201ENST00000395748 OSCARQ8IYS5 282 aa21.41■■□□□ 1.02
AREG-201ENST00000395748 ABCA10Q8WWZ4 1543 aa21.4■■□□□ 1.02
AREG-201ENST00000395748 GRIN2BQ13224 1484 aa21.35■■□□□ 1.01
AREG-201ENST00000395748 GAPVD1Q14C86 1478 aa21.33■■□□□ 1.01
AREG-201ENST00000395748 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
AREG-201ENST00000395748 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
AREG-201ENST00000395748 PBRM1Q86U86 1689 aa21.28■■□□□ 1
AREG-201ENST00000395748 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
AREG-201ENST00000395748 FBLN2P98095 1184 aa21.27■■□□□ 1
AREG-201ENST00000395748 CHD1O14646 1710 aa21.25■□□□□ 0.99
AREG-201ENST00000395748 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
AREG-201ENST00000395748 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
AREG-201ENST00000395748 ERICH3Q5RHP9 1530 aa21.17■□□□□ 0.98
AREG-201ENST00000395748 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
AREG-201ENST00000395748 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
AREG-201ENST00000395748 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
AREG-201ENST00000395748 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
AREG-201ENST00000395748 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
AREG-201ENST00000395748 CLASP1Q7Z460 1538 aa21■□□□□ 0.95
AREG-201ENST00000395748 CUL7Q14999 1698 aa20.99■□□□□ 0.95
AREG-201ENST00000395748 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
AREG-201ENST00000395748 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
AREG-201ENST00000395748 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
AREG-201ENST00000395748 ARHGEF11O15085 1522 aa20.99■□□□□ 0.95
AREG-201ENST00000395748 IGF1RP08069 1367 aa20.98■□□□□ 0.95
AREG-201ENST00000395748 NUP160Q12769 1436 aa20.95■□□□□ 0.94
AREG-201ENST00000395748 CEP170Q5SW79 1584 aa20.9■□□□□ 0.94
AREG-201ENST00000395748 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
AREG-201ENST00000395748 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
AREG-201ENST00000395748 RUSC2Q8N2Y8 1516 aa20.8■□□□□ 0.92
AREG-201ENST00000395748 SHROOM2Q13796 1616 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms