RNA–Protein interactions for RNA: ENST00000394179.5

GSDMB-204, Transcript of gasdermin B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMB, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-204ENST00000394179 NISCHQ9Y2I1 1504 aa22.78■■□□□ 1.24
GSDMB-204ENST00000394179 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.85
GSDMB-204ENST00000394179 ABCC9O60706 1549 aa20.35■□□□□ 0.85
GSDMB-204ENST00000394179 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
GSDMB-204ENST00000394179 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
GSDMB-204ENST00000394179 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
GSDMB-204ENST00000394179 NACADO15069 1562 aa19.25■□□□□ 0.67
GSDMB-204ENST00000394179 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
GSDMB-204ENST00000394179 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
GSDMB-204ENST00000394179 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
GSDMB-204ENST00000394179 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
GSDMB-204ENST00000394179 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.632e-7■■■□□ 14.9
GSDMB-204ENST00000394179 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
GSDMB-204ENST00000394179 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
GSDMB-204ENST00000394179 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
GSDMB-204ENST00000394179 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
GSDMB-204ENST00000394179 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
GSDMB-204ENST00000394179 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
GSDMB-204ENST00000394179 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
GSDMB-204ENST00000394179 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
GSDMB-204ENST00000394179 NCAPD3P42695 1498 aa17.78■□□□□ 0.44
GSDMB-204ENST00000394179 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
GSDMB-204ENST00000394179 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
GSDMB-204ENST00000394179 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
GSDMB-204ENST00000394179 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
GSDMB-204ENST00000394179 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
GSDMB-204ENST00000394179 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
GSDMB-204ENST00000394179 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
GSDMB-204ENST00000394179 PEG3Q9GZU2 1588 aa17.56■□□□□ 0.4
GSDMB-204ENST00000394179 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
GSDMB-204ENST00000394179 NESP48681 1621 aa17.52■□□□□ 0.39
GSDMB-204ENST00000394179 CUX2O14529 1486 aa17.46■□□□□ 0.39
GSDMB-204ENST00000394179 DNAJC5Q9H3Z4 198 aa17.39■□□□□ 0.38
GSDMB-204ENST00000394179 WIZO95785 1651 aa17.38■□□□□ 0.37
GSDMB-204ENST00000394179 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
GSDMB-204ENST00000394179 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
GSDMB-204ENST00000394179 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
GSDMB-204ENST00000394179 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
GSDMB-204ENST00000394179 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
GSDMB-204ENST00000394179 RSF1Q96T23 1441 aaPredicted RBP17.24■□□□□ 0.35
GSDMB-204ENST00000394179 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
GSDMB-204ENST00000394179 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
GSDMB-204ENST00000394179 CFTRP13569 1480 aa17.07■□□□□ 0.32
GSDMB-204ENST00000394179 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
GSDMB-204ENST00000394179 WDR62O43379 1518 aa17.06■□□□□ 0.32
GSDMB-204ENST00000394179 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
GSDMB-204ENST00000394179 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.31
GSDMB-204ENST00000394179 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
GSDMB-204ENST00000394179 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
GSDMB-204ENST00000394179 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
GSDMB-204ENST00000394179 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
GSDMB-204ENST00000394179 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
GSDMB-204ENST00000394179 IFT140Q96RY7 1462 aa16.71■□□□□ 0.27
GSDMB-204ENST00000394179 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
GSDMB-204ENST00000394179 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
GSDMB-204ENST00000394179 ABCC8Q09428 1581 aa16.7■□□□□ 0.26
GSDMB-204ENST00000394179 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
GSDMB-204ENST00000394179 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
GSDMB-204ENST00000394179 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
GSDMB-204ENST00000394179 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
GSDMB-204ENST00000394179 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.25
GSDMB-204ENST00000394179 POLA1P09884 1462 aaPredicted RBP16.58■□□□□ 0.25
GSDMB-204ENST00000394179 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
GSDMB-204ENST00000394179 SOGA1O94964 1423 aa16.52■□□□□ 0.23
GSDMB-204ENST00000394179 CUX1P39880 1505 aa16.5■□□□□ 0.23
GSDMB-204ENST00000394179 FGD5Q6ZNL6 1462 aa16.5■□□□□ 0.23
GSDMB-204ENST00000394179 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
GSDMB-204ENST00000394179 CHD1O14646 1710 aa16.49■□□□□ 0.23
GSDMB-204ENST00000394179 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
GSDMB-204ENST00000394179 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
GSDMB-204ENST00000394179 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
GSDMB-204ENST00000394179 FBLN2P98095 1184 aa16.48■□□□□ 0.23
GSDMB-204ENST00000394179 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
GSDMB-204ENST00000394179 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
GSDMB-204ENST00000394179 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
GSDMB-204ENST00000394179 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
GSDMB-204ENST00000394179 CYB5RLQ6IPT4 315 aa16.35■□□□□ 0.21
GSDMB-204ENST00000394179 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
GSDMB-204ENST00000394179 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
GSDMB-204ENST00000394179 MAGI1Q96QZ7 1491 aaPredicted RBP16.33■□□□□ 0.21
GSDMB-204ENST00000394179 GAPVD1Q14C86 1478 aa16.32■□□□□ 0.2
GSDMB-204ENST00000394179 PBRM1Q86U86 1689 aa16.31■□□□□ 0.2
GSDMB-204ENST00000394179 ABCA10Q8WWZ4 1543 aa16.3■□□□□ 0.2
GSDMB-204ENST00000394179 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
GSDMB-204ENST00000394179 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
GSDMB-204ENST00000394179 CLASP1Q7Z460 1538 aa16.27■□□□□ 0.2
GSDMB-204ENST00000394179 SYNJ1O43426 1573 aa16.27■□□□□ 0.19
GSDMB-204ENST00000394179 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.19
GSDMB-204ENST00000394179 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.19
GSDMB-204ENST00000394179 TOP2BQ02880 1626 aa16.25■□□□□ 0.19
GSDMB-204ENST00000394179 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
GSDMB-204ENST00000394179 GRIN2AQ12879 1464 aa16.15■□□□□ 0.18
GSDMB-204ENST00000394179 ADAMTS12P58397 1594 aa16.14■□□□□ 0.18
GSDMB-204ENST00000394179 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
GSDMB-204ENST00000394179 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
GSDMB-204ENST00000394179 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
GSDMB-204ENST00000394179 CEP170Q5SW79 1584 aa16.09■□□□□ 0.17
GSDMB-204ENST00000394179 NUP160Q12769 1436 aa16.08■□□□□ 0.16
GSDMB-204ENST00000394179 ERCC6L2Q5T890 1561 aa16.06■□□□□ 0.16
GSDMB-204ENST00000394179 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms