RNA–Protein interactions for RNA: ENST00000394175.6

GSDMB-203, Transcript of gasdermin B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GSDMB, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-203ENST00000394175 NISCHQ9Y2I1 1504 aa24.7■■□□□ 1.54
GSDMB-203ENST00000394175 CCDC180Q9P1Z9 1646 aa21.98■■□□□ 1.11
GSDMB-203ENST00000394175 ABCC9O60706 1549 aa21.5■■□□□ 1.03
GSDMB-203ENST00000394175 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
GSDMB-203ENST00000394175 RB1CC1Q8TDY2 1594 aa20.68■□□□□ 0.9
GSDMB-203ENST00000394175 NACADO15069 1562 aa20.64■□□□□ 0.89
GSDMB-203ENST00000394175 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
GSDMB-203ENST00000394175 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
GSDMB-203ENST00000394175 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
GSDMB-203ENST00000394175 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.84
GSDMB-203ENST00000394175 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.812e-7■■■□□ 14.9
GSDMB-203ENST00000394175 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
GSDMB-203ENST00000394175 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
GSDMB-203ENST00000394175 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
GSDMB-203ENST00000394175 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
GSDMB-203ENST00000394175 EIF4G1Q04637 1599 aaKnown RBP19.52■□□□□ 0.72
GSDMB-203ENST00000394175 CC2D2AQ9P2K1 1620 aa19.45■□□□□ 0.7
GSDMB-203ENST00000394175 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
GSDMB-203ENST00000394175 SMARCA4P51532 1647 aa19.19■□□□□ 0.66
GSDMB-203ENST00000394175 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
GSDMB-203ENST00000394175 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
GSDMB-203ENST00000394175 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
GSDMB-203ENST00000394175 SMARCA2P51531 1590 aa19.04■□□□□ 0.64
GSDMB-203ENST00000394175 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
GSDMB-203ENST00000394175 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
GSDMB-203ENST00000394175 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
GSDMB-203ENST00000394175 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
GSDMB-203ENST00000394175 WIZO95785 1651 aa18.88■□□□□ 0.61
GSDMB-203ENST00000394175 RSF1Q96T23 1441 aaPredicted RBP18.81■□□□□ 0.6
GSDMB-203ENST00000394175 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
GSDMB-203ENST00000394175 NESP48681 1621 aa18.61■□□□□ 0.57
GSDMB-203ENST00000394175 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
GSDMB-203ENST00000394175 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
GSDMB-203ENST00000394175 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
GSDMB-203ENST00000394175 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
GSDMB-203ENST00000394175 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
GSDMB-203ENST00000394175 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
GSDMB-203ENST00000394175 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
GSDMB-203ENST00000394175 CFTRP13569 1480 aa18.37■□□□□ 0.53
GSDMB-203ENST00000394175 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
GSDMB-203ENST00000394175 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
GSDMB-203ENST00000394175 CUX2O14529 1486 aa18.29■□□□□ 0.52
GSDMB-203ENST00000394175 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
GSDMB-203ENST00000394175 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.52
GSDMB-203ENST00000394175 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
GSDMB-203ENST00000394175 WDR62O43379 1518 aa18.16■□□□□ 0.5
GSDMB-203ENST00000394175 URB2Q14146 1524 aaKnown RBP18.1■□□□□ 0.49
GSDMB-203ENST00000394175 TOPBP1Q92547 1522 aa18■□□□□ 0.47
GSDMB-203ENST00000394175 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
GSDMB-203ENST00000394175 DNMBPQ6XZF7 1577 aa17.98■□□□□ 0.47
GSDMB-203ENST00000394175 CUX1P39880 1505 aa17.87■□□□□ 0.45
GSDMB-203ENST00000394175 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
GSDMB-203ENST00000394175 POLA1P09884 1462 aaPredicted RBP17.85■□□□□ 0.45
GSDMB-203ENST00000394175 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
GSDMB-203ENST00000394175 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
GSDMB-203ENST00000394175 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
GSDMB-203ENST00000394175 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
GSDMB-203ENST00000394175 SOGA1O94964 1423 aa17.78■□□□□ 0.44
GSDMB-203ENST00000394175 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
GSDMB-203ENST00000394175 EIF4G3O43432 1585 aaKnown RBP17.76■□□□□ 0.43
GSDMB-203ENST00000394175 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
GSDMB-203ENST00000394175 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
GSDMB-203ENST00000394175 TOP2BQ02880 1626 aa17.73■□□□□ 0.43
GSDMB-203ENST00000394175 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
GSDMB-203ENST00000394175 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.43
GSDMB-203ENST00000394175 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
GSDMB-203ENST00000394175 WDR97A6NE52 1622 aa17.68■□□□□ 0.42
GSDMB-203ENST00000394175 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
GSDMB-203ENST00000394175 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
GSDMB-203ENST00000394175 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.4
GSDMB-203ENST00000394175 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
GSDMB-203ENST00000394175 CHD1O14646 1710 aa17.57■□□□□ 0.4
GSDMB-203ENST00000394175 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
GSDMB-203ENST00000394175 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
GSDMB-203ENST00000394175 SNAPC4Q5SXM2 1469 aa17.55■□□□□ 0.4
GSDMB-203ENST00000394175 FBLN2P98095 1184 aa17.54■□□□□ 0.4
GSDMB-203ENST00000394175 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
GSDMB-203ENST00000394175 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
GSDMB-203ENST00000394175 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
GSDMB-203ENST00000394175 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
GSDMB-203ENST00000394175 ADAMTS12P58397 1594 aa17.4■□□□□ 0.38
GSDMB-203ENST00000394175 KIF27Q86VH2 1401 aa17.39■□□□□ 0.37
GSDMB-203ENST00000394175 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
GSDMB-203ENST00000394175 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
GSDMB-203ENST00000394175 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
GSDMB-203ENST00000394175 RIMBP3CA6NJZ7 1639 aa17.31■□□□□ 0.36
GSDMB-203ENST00000394175 RIMBP3BA6NNM3 1639 aa17.31■□□□□ 0.36
GSDMB-203ENST00000394175 RIMBP3Q9UFD9 1639 aa17.31■□□□□ 0.36
GSDMB-203ENST00000394175 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
GSDMB-203ENST00000394175 CUL7Q14999 1698 aa17.3■□□□□ 0.36
GSDMB-203ENST00000394175 IGF1RP08069 1367 aa17.29■□□□□ 0.36
GSDMB-203ENST00000394175 ARHGEF11O15085 1522 aa17.29■□□□□ 0.36
GSDMB-203ENST00000394175 CEP170Q5SW79 1584 aa17.26■□□□□ 0.35
GSDMB-203ENST00000394175 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
GSDMB-203ENST00000394175 NUP160Q12769 1436 aa17.23■□□□□ 0.35
GSDMB-203ENST00000394175 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
GSDMB-203ENST00000394175 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
GSDMB-203ENST00000394175 CYB5RLQ6IPT4 315 aa17.14■□□□□ 0.33
GSDMB-203ENST00000394175 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
GSDMB-203ENST00000394175 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms