RNA–Protein interactions for RNA: ENST00000394148.7

CSF3-203, Transcript of colony stimulating factor 3, humanhuman

TSL 3 BASIC

Gene CSF3, Length 622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3-203ENST00000394148 NISCHQ9Y2I1 1504 aa42.9■■■■■ 4.46
CSF3-203ENST00000394148 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
CSF3-203ENST00000394148 ABCC9O60706 1549 aa38.02■■■■□ 3.68
CSF3-203ENST00000394148 RB1CC1Q8TDY2 1594 aa36.27■■■■□ 3.4
CSF3-203ENST00000394148 NACADO15069 1562 aa36.1■■■■□ 3.37
CSF3-203ENST00000394148 DCAF8L2P0C7V8 631 aa36.02■■■■□ 3.36
CSF3-203ENST00000394148 MYO15BQ96JP2 1530 aa35.71■■■■□ 3.31
CSF3-203ENST00000394148 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
CSF3-203ENST00000394148 UNC13AQ9UPW8 1703 aa35.52■■■■□ 3.28
CSF3-203ENST00000394148 PABPN1Q86U42 306 aaKnown RBP eCLIP35.45■■■■□ 3.27
CSF3-203ENST00000394148 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
CSF3-203ENST00000394148 DNAJC5BQ9UF47 199 aa35.33■■■■□ 3.25
CSF3-203ENST00000394148 BICRAQ9NZM4 1560 aa35.28■■■■□ 3.24
CSF3-203ENST00000394148 SCRIBQ14160 1630 aa35.01■■■■□ 3.19
CSF3-203ENST00000394148 SHROOM4Q9ULL8 1493 aa34.73■■■■□ 3.15
CSF3-203ENST00000394148 AEBP2Q6ZN18 517 aaPredicted RBP34.51■■■■□ 3.12
CSF3-203ENST00000394148 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
CSF3-203ENST00000394148 CC2D2AQ9P2K1 1620 aa34.33■■■■□ 3.09
CSF3-203ENST00000394148 CECR2Q9BXF3 1484 aa34.17■■■■□ 3.06
CSF3-203ENST00000394148 SMARCA4P51532 1647 aa33.4■■■□□ 2.94
CSF3-203ENST00000394148 NCAPD3P42695 1498 aa33.33■■■□□ 2.93
CSF3-203ENST00000394148 ATAD2BQ9ULI0 1458 aa33.32■■■□□ 2.92
CSF3-203ENST00000394148 BAZ1AQ9NRL2 1556 aaPredicted RBP33.25■■■□□ 2.91
CSF3-203ENST00000394148 SMARCA2P51531 1590 aa33.21■■■□□ 2.91
CSF3-203ENST00000394148 HMGXB3Q12766 1538 aa33.14■■■□□ 2.9
CSF3-203ENST00000394148 MROH2BQ7Z745 1585 aa33.1■■■□□ 2.89
CSF3-203ENST00000394148 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
CSF3-203ENST00000394148 BAZ1BQ9UIG0 1483 aaKnown RBP33.02■■■□□ 2.88
CSF3-203ENST00000394148 NESP48681 1621 aa32.78■■■□□ 2.84
CSF3-203ENST00000394148 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
CSF3-203ENST00000394148 CHIC1Q5VXU3 224 aa32.72■■■□□ 2.83
CSF3-203ENST00000394148 WIZO95785 1651 aa32.72■■■□□ 2.83
CSF3-203ENST00000394148 CUX2O14529 1486 aa32.54■■■□□ 2.8
CSF3-203ENST00000394148 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
CSF3-203ENST00000394148 RSF1Q96T23 1441 aaPredicted RBP32.52■■■□□ 2.8
CSF3-203ENST00000394148 THOC2Q8NI27 1593 aaKnown RBP32.36■■■□□ 2.77
CSF3-203ENST00000394148 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
CSF3-203ENST00000394148 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
CSF3-203ENST00000394148 PDS5BQ9NTI5 1447 aa32.31■■■□□ 2.76
CSF3-203ENST00000394148 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
CSF3-203ENST00000394148 DNAJC5Q9H3Z4 198 aa32.08■■■□□ 2.73
CSF3-203ENST00000394148 CFTRP13569 1480 aa32.07■■■□□ 2.72
CSF3-203ENST00000394148 MRC2Q9UBG0 1479 aa32.06■■■□□ 2.72
CSF3-203ENST00000394148 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
CSF3-203ENST00000394148 CEP164Q9UPV0 1460 aa32■■■□□ 2.71
CSF3-203ENST00000394148 WDR62O43379 1518 aa31.98■■■□□ 2.71
CSF3-203ENST00000394148 CCDC88BA6NC98 1476 aa31.94■■■□□ 2.7
CSF3-203ENST00000394148 PRDM2Q13029 1718 aa31.78■■■□□ 2.68
CSF3-203ENST00000394148 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
CSF3-203ENST00000394148 TOPBP1Q92547 1522 aa31.45■■■□□ 2.63
CSF3-203ENST00000394148 DNMBPQ6XZF7 1577 aa31.37■■■□□ 2.61
CSF3-203ENST00000394148 SUPT5HO00267 1087 aaKnown RBP31.36■■■□□ 2.61
CSF3-203ENST00000394148 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
CSF3-203ENST00000394148 ZNF608Q9ULD9 1512 aaPredicted RBP31.32■■■□□ 2.6
CSF3-203ENST00000394148 ABCC8Q09428 1581 aa31.31■■■□□ 2.6
CSF3-203ENST00000394148 POLA1P09884 1462 aaPredicted RBP31.16■■■□□ 2.58
CSF3-203ENST00000394148 TARBP1Q13395 1621 aaKnown RBP31.16■■■□□ 2.58
CSF3-203ENST00000394148 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
CSF3-203ENST00000394148 CUX1P39880 1505 aa31.08■■■□□ 2.57
CSF3-203ENST00000394148 OSCARQ8IYS5 282 aa31.07■■■□□ 2.56
CSF3-203ENST00000394148 RAD54L2Q9Y4B4 1467 aa31.07■■■□□ 2.56
CSF3-203ENST00000394148 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.56
CSF3-203ENST00000394148 FGD5Q6ZNL6 1462 aa31.03■■■□□ 2.56
CSF3-203ENST00000394148 SOGA1O94964 1423 aa30.98■■■□□ 2.55
CSF3-203ENST00000394148 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
CSF3-203ENST00000394148 TRIM41Q8WV44 630 aa30.89■■■□□ 2.54
CSF3-203ENST00000394148 CHD1O14646 1710 aa30.84■■■□□ 2.53
CSF3-203ENST00000394148 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
CSF3-203ENST00000394148 SNAPC4Q5SXM2 1469 aa30.76■■■□□ 2.52
CSF3-203ENST00000394148 FBLN2P98095 1184 aa30.73■■■□□ 2.51
CSF3-203ENST00000394148 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
CSF3-203ENST00000394148 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
CSF3-203ENST00000394148 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
CSF3-203ENST00000394148 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
CSF3-203ENST00000394148 SYNJ1O43426 1573 aa30.67■■■□□ 2.5
CSF3-203ENST00000394148 ABCA10Q8WWZ4 1543 aa30.67■■■□□ 2.5
CSF3-203ENST00000394148 ARHGEF11O15085 1522 aa30.66■■■□□ 2.5
CSF3-203ENST00000394148 WRNQ14191 1432 aaPredicted RBP eCLIP30.65■■■□□ 2.5
CSF3-203ENST00000394148 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
CSF3-203ENST00000394148 MAGI1Q96QZ7 1491 aaPredicted RBP30.64■■■□□ 2.5
CSF3-203ENST00000394148 TOP2BQ02880 1626 aa30.64■■■□□ 2.5
CSF3-203ENST00000394148 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
CSF3-203ENST00000394148 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
CSF3-203ENST00000394148 PBRM1Q86U86 1689 aa30.62■■■□□ 2.49
CSF3-203ENST00000394148 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
CSF3-203ENST00000394148 SYNJ2O15056 1496 aa30.54■■■□□ 2.48
CSF3-203ENST00000394148 CLASP1Q7Z460 1538 aa30.49■■■□□ 2.47
CSF3-203ENST00000394148 ARAP1Q96P48 1450 aa30.41■■■□□ 2.46
CSF3-203ENST00000394148 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
CSF3-203ENST00000394148 CYB5RLQ6IPT4 315 aa30.37■■■□□ 2.45
CSF3-203ENST00000394148 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
CSF3-203ENST00000394148 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
CSF3-203ENST00000394148 FHAD1B1AJZ9 1412 aa30.24■■■□□ 2.43
CSF3-203ENST00000394148 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
CSF3-203ENST00000394148 NUP160Q12769 1436 aa30.2■■■□□ 2.42
CSF3-203ENST00000394148 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
CSF3-203ENST00000394148 KIF27Q86VH2 1401 aa30.03■■■□□ 2.4
CSF3-203ENST00000394148 SHROOM2Q13796 1616 aa30.02■■■□□ 2.4
CSF3-203ENST00000394148 IGF1RP08069 1367 aa29.98■■■□□ 2.39
CSF3-203ENST00000394148 RUSC2Q8N2Y8 1516 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms