RNA–Protein interactions for RNA: ENST00000391762.5

NDUFA3-202, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 5 BASIC

Gene NDUFA3, Length 435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-202ENST00000391762 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
NDUFA3-202ENST00000391762 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
NDUFA3-202ENST00000391762 ABCC9O60706 1549 aa20.22■□□□□ 0.83
NDUFA3-202ENST00000391762 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
NDUFA3-202ENST00000391762 NACADO15069 1562 aa19.36■□□□□ 0.69
NDUFA3-202ENST00000391762 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
NDUFA3-202ENST00000391762 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
NDUFA3-202ENST00000391762 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
NDUFA3-202ENST00000391762 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
NDUFA3-202ENST00000391762 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
NDUFA3-202ENST00000391762 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
NDUFA3-202ENST00000391762 SCRIBQ14160 1630 aa18.77■□□□□ 0.6
NDUFA3-202ENST00000391762 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
NDUFA3-202ENST00000391762 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
NDUFA3-202ENST00000391762 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
NDUFA3-202ENST00000391762 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
NDUFA3-202ENST00000391762 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
NDUFA3-202ENST00000391762 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
NDUFA3-202ENST00000391762 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
NDUFA3-202ENST00000391762 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
NDUFA3-202ENST00000391762 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
NDUFA3-202ENST00000391762 NCAPD3P42695 1498 aa17.83■□□□□ 0.45
NDUFA3-202ENST00000391762 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.45
NDUFA3-202ENST00000391762 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
NDUFA3-202ENST00000391762 SMARCA2P51531 1590 aa17.8■□□□□ 0.44
NDUFA3-202ENST00000391762 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.44
NDUFA3-202ENST00000391762 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
NDUFA3-202ENST00000391762 WIZO95785 1651 aa17.61■□□□□ 0.41
NDUFA3-202ENST00000391762 NESP48681 1621 aa17.5■□□□□ 0.39
NDUFA3-202ENST00000391762 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
NDUFA3-202ENST00000391762 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
NDUFA3-202ENST00000391762 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
NDUFA3-202ENST00000391762 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
NDUFA3-202ENST00000391762 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
NDUFA3-202ENST00000391762 ERCC6Q03468 1493 aa17.36■□□□□ 0.37
NDUFA3-202ENST00000391762 CUX2O14529 1486 aa17.33■□□□□ 0.37
NDUFA3-202ENST00000391762 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
NDUFA3-202ENST00000391762 CADPSQ9ULU8 1353 aa17.23■□□□□ 0.35
NDUFA3-202ENST00000391762 PDS5BQ9NTI5 1447 aa17.18■□□□□ 0.34
NDUFA3-202ENST00000391762 CFTRP13569 1480 aa17.18■□□□□ 0.34
NDUFA3-202ENST00000391762 WDR62O43379 1518 aa17.16■□□□□ 0.34
NDUFA3-202ENST00000391762 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
NDUFA3-202ENST00000391762 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
NDUFA3-202ENST00000391762 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
NDUFA3-202ENST00000391762 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
NDUFA3-202ENST00000391762 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
NDUFA3-202ENST00000391762 DNAJC5Q9H3Z4 198 aa16.88■□□□□ 0.29
NDUFA3-202ENST00000391762 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
NDUFA3-202ENST00000391762 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
NDUFA3-202ENST00000391762 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
NDUFA3-202ENST00000391762 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
NDUFA3-202ENST00000391762 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
NDUFA3-202ENST00000391762 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
NDUFA3-202ENST00000391762 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
NDUFA3-202ENST00000391762 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
NDUFA3-202ENST00000391762 WDR97A6NE52 1622 aa16.69■□□□□ 0.26
NDUFA3-202ENST00000391762 CUX1P39880 1505 aa16.69■□□□□ 0.26
NDUFA3-202ENST00000391762 SUPT5HO00267 1087 aaKnown RBP16.63■□□□□ 0.25
NDUFA3-202ENST00000391762 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
NDUFA3-202ENST00000391762 CHD1O14646 1710 aa16.59■□□□□ 0.25
NDUFA3-202ENST00000391762 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
NDUFA3-202ENST00000391762 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
NDUFA3-202ENST00000391762 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.24
NDUFA3-202ENST00000391762 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
NDUFA3-202ENST00000391762 SYNJ1O43426 1573 aa16.52■□□□□ 0.24
NDUFA3-202ENST00000391762 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.23
NDUFA3-202ENST00000391762 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
NDUFA3-202ENST00000391762 SOGA1O94964 1423 aa16.49■□□□□ 0.23
NDUFA3-202ENST00000391762 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
NDUFA3-202ENST00000391762 TDRD9Q8NDG6 1382 aaKnown RBP16.43■□□□□ 0.22
NDUFA3-202ENST00000391762 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
NDUFA3-202ENST00000391762 RIMBP3CA6NJZ7 1639 aa16.42■□□□□ 0.22
NDUFA3-202ENST00000391762 RIMBP3BA6NNM3 1639 aa16.42■□□□□ 0.22
NDUFA3-202ENST00000391762 RIMBP3Q9UFD9 1639 aa16.42■□□□□ 0.22
NDUFA3-202ENST00000391762 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
NDUFA3-202ENST00000391762 MAGI1Q96QZ7 1491 aaPredicted RBP16.39■□□□□ 0.21
NDUFA3-202ENST00000391762 CLASP1Q7Z460 1538 aa16.38■□□□□ 0.21
NDUFA3-202ENST00000391762 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
NDUFA3-202ENST00000391762 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
NDUFA3-202ENST00000391762 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
NDUFA3-202ENST00000391762 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
NDUFA3-202ENST00000391762 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
NDUFA3-202ENST00000391762 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
NDUFA3-202ENST00000391762 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
NDUFA3-202ENST00000391762 ARAP1Q96P48 1450 aa16.23■□□□□ 0.19
NDUFA3-202ENST00000391762 CEP170Q5SW79 1584 aa16.22■□□□□ 0.19
NDUFA3-202ENST00000391762 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
NDUFA3-202ENST00000391762 SHROOM2Q13796 1616 aa16.18■□□□□ 0.18
NDUFA3-202ENST00000391762 NUP160Q12769 1436 aa16.17■□□□□ 0.18
NDUFA3-202ENST00000391762 FBLN2P98095 1184 aa16.16■□□□□ 0.18
NDUFA3-202ENST00000391762 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
NDUFA3-202ENST00000391762 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
NDUFA3-202ENST00000391762 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
NDUFA3-202ENST00000391762 RUSC2Q8N2Y8 1516 aa16.13■□□□□ 0.17
NDUFA3-202ENST00000391762 CUL7Q14999 1698 aa16.11■□□□□ 0.17
NDUFA3-202ENST00000391762 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
NDUFA3-202ENST00000391762 KIF27Q86VH2 1401 aa16.02■□□□□ 0.16
NDUFA3-202ENST00000391762 IGF1RP08069 1367 aa16■□□□□ 0.15
NDUFA3-202ENST00000391762 CYB5RLQ6IPT4 315 aa15.98■□□□□ 0.15
NDUFA3-202ENST00000391762 KIAA0586Q9BVV6 1533 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms