RNA–Protein interactions for RNA: ENST00000391209.2

U3.25-201, humanhuman

BASIC

Gene U3, Length 220 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.25-201ENST00000391209 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
U3.25-201ENST00000391209 CHIC1Q5VXU3 224 aa17.08■□□□□ 0.32
U3.25-201ENST00000391209 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
U3.25-201ENST00000391209 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
U3.25-201ENST00000391209 NISCHQ9Y2I1 1504 aa14.9□□□□□ -0.02
U3.25-201ENST00000391209 FOXD1Q16676 465 aa14.2□□□□□ -0.14
U3.25-201ENST00000391209 ABCC9O60706 1549 aa13.85□□□□□ -0.19
U3.25-201ENST00000391209 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
U3.25-201ENST00000391209 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
U3.25-201ENST00000391209 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
U3.25-201ENST00000391209 ADRA2BP18089 450 aa13.37□□□□□ -0.27
U3.25-201ENST00000391209 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
U3.25-201ENST00000391209 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
U3.25-201ENST00000391209 MSH5O43196 834 aa13.2□□□□□ -0.3
U3.25-201ENST00000391209 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
U3.25-201ENST00000391209 NACADO15069 1562 aa12.86□□□□□ -0.35
U3.25-201ENST00000391209 UNC13AQ9UPW8 1703 aa12.8□□□□□ -0.36
U3.25-201ENST00000391209 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.37
U3.25-201ENST00000391209 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
U3.25-201ENST00000391209 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
U3.25-201ENST00000391209 MYO15BQ96JP2 1530 aa12.6□□□□□ -0.39
U3.25-201ENST00000391209 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
U3.25-201ENST00000391209 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
U3.25-201ENST00000391209 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
U3.25-201ENST00000391209 SHROOM4Q9ULL8 1493 aa12.51□□□□□ -0.41
U3.25-201ENST00000391209 EIF4G1Q04637 1599 aaKnown RBP12.41□□□□□ -0.42
U3.25-201ENST00000391209 DNAJC5Q9H3Z4 198 aa12.4□□□□□ -0.42
U3.25-201ENST00000391209 SCRIBQ14160 1630 aa12.33□□□□□ -0.44
U3.25-201ENST00000391209 ZCCHC6Q5VYS8 1495 aaKnown RBP12.32□□□□□ -0.44
U3.25-201ENST00000391209 DCAF1Q9Y4B6 1507 aa12.31□□□□□ -0.44
U3.25-201ENST00000391209 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
U3.25-201ENST00000391209 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
U3.25-201ENST00000391209 CUX2O14529 1486 aa12.09□□□□□ -0.47
U3.25-201ENST00000391209 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
U3.25-201ENST00000391209 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
U3.25-201ENST00000391209 ERCC6Q03468 1493 aa11.96□□□□□ -0.49
U3.25-201ENST00000391209 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
U3.25-201ENST00000391209 THOC2Q8NI27 1593 aaKnown RBP11.83□□□□□ -0.52
U3.25-201ENST00000391209 NESP48681 1621 aa11.82□□□□□ -0.52
U3.25-201ENST00000391209 ATAD2BQ9ULI0 1458 aa11.8□□□□□ -0.52
U3.25-201ENST00000391209 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
U3.25-201ENST00000391209 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
U3.25-201ENST00000391209 SMARCA2P51531 1590 aa11.74□□□□□ -0.53
U3.25-201ENST00000391209 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
U3.25-201ENST00000391209 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
U3.25-201ENST00000391209 TRIM41Q8WV44 630 aa11.68□□□□□ -0.54
U3.25-201ENST00000391209 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
U3.25-201ENST00000391209 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
U3.25-201ENST00000391209 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
U3.25-201ENST00000391209 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.54
U3.25-201ENST00000391209 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
U3.25-201ENST00000391209 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
U3.25-201ENST00000391209 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
U3.25-201ENST00000391209 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.55
U3.25-201ENST00000391209 PDS5BQ9NTI5 1447 aa11.57□□□□□ -0.56
U3.25-201ENST00000391209 WDR62O43379 1518 aa11.55□□□□□ -0.56
U3.25-201ENST00000391209 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
U3.25-201ENST00000391209 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
U3.25-201ENST00000391209 CADPSQ9ULU8 1353 aa11.46□□□□□ -0.57
U3.25-201ENST00000391209 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
U3.25-201ENST00000391209 CEP164Q9UPV0 1460 aa11.41□□□□□ -0.58
U3.25-201ENST00000391209 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
U3.25-201ENST00000391209 RIMBP3BA6NNM3 1639 aa11.38□□□□□ -0.59
U3.25-201ENST00000391209 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
U3.25-201ENST00000391209 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
U3.25-201ENST00000391209 KCNA4P22459 653 aa11.36□□□□□ -0.59
U3.25-201ENST00000391209 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
U3.25-201ENST00000391209 WIZO95785 1651 aa11.33□□□□□ -0.6
U3.25-201ENST00000391209 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
U3.25-201ENST00000391209 URB2Q14146 1524 aaKnown RBP11.33□□□□□ -0.6
U3.25-201ENST00000391209 ARHGEF11O15085 1522 aa11.31□□□□□ -0.6
U3.25-201ENST00000391209 CFTRP13569 1480 aa11.3□□□□□ -0.6
U3.25-201ENST00000391209 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
U3.25-201ENST00000391209 ZNF608Q9ULD9 1512 aaPredicted RBP11.24□□□□□ -0.61
U3.25-201ENST00000391209 PRDM2Q13029 1718 aa11.21□□□□□ -0.61
U3.25-201ENST00000391209 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
U3.25-201ENST00000391209 IFT140Q96RY7 1462 aa11.19□□□□□ -0.62
U3.25-201ENST00000391209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.19□□□□□ -0.62
U3.25-201ENST00000391209 EIF4G3O43432 1585 aaKnown RBP11.19□□□□□ -0.62
U3.25-201ENST00000391209 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
U3.25-201ENST00000391209 CHD1O14646 1710 aa11.16□□□□□ -0.62
U3.25-201ENST00000391209 TOPBP1Q92547 1522 aa11.13□□□□□ -0.63
U3.25-201ENST00000391209 C1QBPQ07021 282 aaKnown RBP11.12□□□□□ -0.63
U3.25-201ENST00000391209 CYB5RLQ6IPT4 315 aa11.12□□□□□ -0.63
U3.25-201ENST00000391209 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
U3.25-201ENST00000391209 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
U3.25-201ENST00000391209 TARBP1Q13395 1621 aaKnown RBP11.08□□□□□ -0.64
U3.25-201ENST00000391209 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
U3.25-201ENST00000391209 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.64
U3.25-201ENST00000391209 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
U3.25-201ENST00000391209 ABCC8Q09428 1581 aa11.02□□□□□ -0.65
U3.25-201ENST00000391209 CCDC88BA6NC98 1476 aa11.01□□□□□ -0.65
U3.25-201ENST00000391209 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
U3.25-201ENST00000391209 SNAPC4Q5SXM2 1469 aa10.96□□□□□ -0.65
U3.25-201ENST00000391209 FBLN2P98095 1184 aa10.95□□□□□ -0.66
U3.25-201ENST00000391209 SYNJ1O43426 1573 aa10.94□□□□□ -0.66
U3.25-201ENST00000391209 WDR97A6NE52 1622 aa10.94□□□□□ -0.66
U3.25-201ENST00000391209 RAD54L2Q9Y4B4 1467 aa10.93□□□□□ -0.66
U3.25-201ENST00000391209 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
U3.25-201ENST00000391209 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms