RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
TRAV13-1-201ENST00000390436 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
TRAV13-1-201ENST00000390436 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
TRAV13-1-201ENST00000390436 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
TRAV13-1-201ENST00000390436 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
TRAV13-1-201ENST00000390436 ABCC9O60706 1549 aa15.73■□□□□ 0.11
TRAV13-1-201ENST00000390436 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
TRAV13-1-201ENST00000390436 PLPPR3Q6T4P5 718 aa15.33■□□□□ 0.04
TRAV13-1-201ENST00000390436 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
TRAV13-1-201ENST00000390436 FOXD1Q16676 465 aa14.94□□□□□ -0.02
TRAV13-1-201ENST00000390436 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
TRAV13-1-201ENST00000390436 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
TRAV13-1-201ENST00000390436 PABPN1Q86U42 306 aaKnown RBP eCLIP14.63□□□□□ -0.07
TRAV13-1-201ENST00000390436 NACADO15069 1562 aa14.59□□□□□ -0.07
TRAV13-1-201ENST00000390436 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
TRAV13-1-201ENST00000390436 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
TRAV13-1-201ENST00000390436 ADRA2BP18089 450 aa14.53□□□□□ -0.08
TRAV13-1-201ENST00000390436 DCAF8L2P0C7V8 631 aa14.51□□□□□ -0.09
TRAV13-1-201ENST00000390436 MYO15BQ96JP2 1530 aa14.29□□□□□ -0.12
TRAV13-1-201ENST00000390436 CC2D2AQ9P2K1 1620 aa14.19□□□□□ -0.14
TRAV13-1-201ENST00000390436 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
TRAV13-1-201ENST00000390436 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
TRAV13-1-201ENST00000390436 PIAS4Q8N2W9 510 aaPredicted RBP14.11□□□□□ -0.15
TRAV13-1-201ENST00000390436 CECR2Q9BXF3 1484 aa14.11□□□□□ -0.15
TRAV13-1-201ENST00000390436 EIF4G1Q04637 1599 aaKnown RBP14.08□□□□□ -0.16
TRAV13-1-201ENST00000390436 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
TRAV13-1-201ENST00000390436 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
TRAV13-1-201ENST00000390436 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
TRAV13-1-201ENST00000390436 MSH5O43196 834 aa13.66□□□□□ -0.22
TRAV13-1-201ENST00000390436 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
TRAV13-1-201ENST00000390436 NESP48681 1621 aa13.53□□□□□ -0.24
TRAV13-1-201ENST00000390436 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
TRAV13-1-201ENST00000390436 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
TRAV13-1-201ENST00000390436 KCNA4P22459 653 aa13.48□□□□□ -0.25
TRAV13-1-201ENST00000390436 CUX2O14529 1486 aa13.48□□□□□ -0.25
TRAV13-1-201ENST00000390436 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
TRAV13-1-201ENST00000390436 ERCC6Q03468 1493 aa13.43□□□□□ -0.26
TRAV13-1-201ENST00000390436 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
TRAV13-1-201ENST00000390436 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
TRAV13-1-201ENST00000390436 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
TRAV13-1-201ENST00000390436 SMARCA2P51531 1590 aa13.33□□□□□ -0.28
TRAV13-1-201ENST00000390436 MROH2BQ7Z745 1585 aa13.31□□□□□ -0.28
TRAV13-1-201ENST00000390436 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
TRAV13-1-201ENST00000390436 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
TRAV13-1-201ENST00000390436 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
TRAV13-1-201ENST00000390436 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
TRAV13-1-201ENST00000390436 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
TRAV13-1-201ENST00000390436 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
TRAV13-1-201ENST00000390436 WIZO95785 1651 aa13.16□□□□□ -0.3
TRAV13-1-201ENST00000390436 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
TRAV13-1-201ENST00000390436 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
TRAV13-1-201ENST00000390436 TRIM41Q8WV44 630 aa13.09□□□□□ -0.31
TRAV13-1-201ENST00000390436 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
TRAV13-1-201ENST00000390436 WDR62O43379 1518 aa13.07□□□□□ -0.32
TRAV13-1-201ENST00000390436 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
TRAV13-1-201ENST00000390436 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
TRAV13-1-201ENST00000390436 MRC2Q9UBG0 1479 aa13.05□□□□□ -0.32
TRAV13-1-201ENST00000390436 URB2Q14146 1524 aaKnown RBP12.96□□□□□ -0.33
TRAV13-1-201ENST00000390436 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.34
TRAV13-1-201ENST00000390436 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
TRAV13-1-201ENST00000390436 CFTRP13569 1480 aa12.91□□□□□ -0.34
TRAV13-1-201ENST00000390436 RSF1Q96T23 1441 aaPredicted RBP12.9□□□□□ -0.34
TRAV13-1-201ENST00000390436 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
TRAV13-1-201ENST00000390436 ZNF608Q9ULD9 1512 aaPredicted RBP12.86□□□□□ -0.35
TRAV13-1-201ENST00000390436 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
TRAV13-1-201ENST00000390436 SLC4A1APQ9BWU0 796 aaKnown RBP12.85□□□□□ -0.35
TRAV13-1-201ENST00000390436 RIMBP3CA6NJZ7 1639 aa12.84□□□□□ -0.35
TRAV13-1-201ENST00000390436 RIMBP3BA6NNM3 1639 aa12.84□□□□□ -0.35
TRAV13-1-201ENST00000390436 RIMBP3Q9UFD9 1639 aa12.84□□□□□ -0.35
TRAV13-1-201ENST00000390436 PRDM2Q13029 1718 aa12.83□□□□□ -0.36
TRAV13-1-201ENST00000390436 OSCARQ8IYS5 282 aa12.82□□□□□ -0.36
TRAV13-1-201ENST00000390436 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
TRAV13-1-201ENST00000390436 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
TRAV13-1-201ENST00000390436 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
TRAV13-1-201ENST00000390436 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
TRAV13-1-201ENST00000390436 CHD1O14646 1710 aa12.72□□□□□ -0.37
TRAV13-1-201ENST00000390436 HOXD11P31277 338 aaPredicted RBP12.72□□□□□ -0.37
TRAV13-1-201ENST00000390436 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
TRAV13-1-201ENST00000390436 EIF4G3O43432 1585 aaKnown RBP12.72□□□□□ -0.37
TRAV13-1-201ENST00000390436 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
TRAV13-1-201ENST00000390436 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
TRAV13-1-201ENST00000390436 AQRO60306 1485 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRAV13-1-201ENST00000390436 ARAP1Q96P48 1450 aa12.64□□□□□ -0.39
TRAV13-1-201ENST00000390436 DNMBPQ6XZF7 1577 aa12.62□□□□□ -0.39
TRAV13-1-201ENST00000390436 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
TRAV13-1-201ENST00000390436 CYB5RLQ6IPT4 315 aa12.61□□□□□ -0.39
TRAV13-1-201ENST00000390436 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
TRAV13-1-201ENST00000390436 TDRD9Q8NDG6 1382 aaKnown RBP12.54□□□□□ -0.4
TRAV13-1-201ENST00000390436 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
TRAV13-1-201ENST00000390436 CLASP1Q7Z460 1538 aa12.51□□□□□ -0.41
TRAV13-1-201ENST00000390436 FBLN2P98095 1184 aa12.5□□□□□ -0.41
TRAV13-1-201ENST00000390436 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
TRAV13-1-201ENST00000390436 CUX1P39880 1505 aa12.49□□□□□ -0.41
TRAV13-1-201ENST00000390436 SNAPC4Q5SXM2 1469 aa12.49□□□□□ -0.41
TRAV13-1-201ENST00000390436 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
TRAV13-1-201ENST00000390436 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
TRAV13-1-201ENST00000390436 SOGA1O94964 1423 aa12.46□□□□□ -0.41
TRAV13-1-201ENST00000390436 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
TRAV13-1-201ENST00000390436 ERCC6L2Q5T890 1561 aa12.43□□□□□ -0.42
TRAV13-1-201ENST00000390436 ZBTB22O15209 634 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms