RNA–Protein interactions for RNA: ENST00000390363.2

TRBV9-201, Transcript of T cell receptor beta variable 9, humanhuman

APPRIS P1 BASIC

Gene TRBV9, Length 390 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9-201ENST00000390363 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
TRBV9-201ENST00000390363 ABCC9O60706 1549 aa15.49■□□□□ 0.07
TRBV9-201ENST00000390363 CCDC180Q9P1Z9 1646 aa15.41■□□□□ 0.06
TRBV9-201ENST00000390363 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
TRBV9-201ENST00000390363 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
TRBV9-201ENST00000390363 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
TRBV9-201ENST00000390363 NACADO15069 1562 aa14.61□□□□□ -0.07
TRBV9-201ENST00000390363 ZCCHC6Q5VYS8 1495 aaKnown RBP14.52□□□□□ -0.08
TRBV9-201ENST00000390363 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.09
TRBV9-201ENST00000390363 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
TRBV9-201ENST00000390363 DCAF1Q9Y4B6 1507 aa14.42□□□□□ -0.1
TRBV9-201ENST00000390363 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
TRBV9-201ENST00000390363 UNC13AQ9UPW8 1703 aa14.34□□□□□ -0.11
TRBV9-201ENST00000390363 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
TRBV9-201ENST00000390363 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
TRBV9-201ENST00000390363 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
TRBV9-201ENST00000390363 CECR2Q9BXF3 1484 aa13.98□□□□□ -0.17
TRBV9-201ENST00000390363 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.18
TRBV9-201ENST00000390363 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
TRBV9-201ENST00000390363 NCAPD3P42695 1498 aa13.57□□□□□ -0.24
TRBV9-201ENST00000390363 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
TRBV9-201ENST00000390363 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
TRBV9-201ENST00000390363 SMARCA4P51532 1647 aa13.47□□□□□ -0.25
TRBV9-201ENST00000390363 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
TRBV9-201ENST00000390363 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
TRBV9-201ENST00000390363 CUX2O14529 1486 aa13.39□□□□□ -0.27
TRBV9-201ENST00000390363 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
TRBV9-201ENST00000390363 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
TRBV9-201ENST00000390363 RSF1Q96T23 1441 aaPredicted RBP13.34□□□□□ -0.27
TRBV9-201ENST00000390363 NESP48681 1621 aa13.33□□□□□ -0.28
TRBV9-201ENST00000390363 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
TRBV9-201ENST00000390363 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
TRBV9-201ENST00000390363 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
TRBV9-201ENST00000390363 WIZO95785 1651 aa13.26□□□□□ -0.29
TRBV9-201ENST00000390363 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
TRBV9-201ENST00000390363 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
TRBV9-201ENST00000390363 TOP2AP11388 1531 aaKnown RBP13.17□□□□□ -0.3
TRBV9-201ENST00000390363 CADPSQ9ULU8 1353 aa13.12□□□□□ -0.31
TRBV9-201ENST00000390363 PDS5BQ9NTI5 1447 aa13.11□□□□□ -0.31
TRBV9-201ENST00000390363 KIF21AQ7Z4S6 1674 aa13.05□□□□□ -0.32
TRBV9-201ENST00000390363 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
TRBV9-201ENST00000390363 WDR62O43379 1518 aa13□□□□□ -0.33
TRBV9-201ENST00000390363 MRC2Q9UBG0 1479 aa12.99□□□□□ -0.33
TRBV9-201ENST00000390363 CFTRP13569 1480 aa12.97□□□□□ -0.33
TRBV9-201ENST00000390363 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
TRBV9-201ENST00000390363 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
TRBV9-201ENST00000390363 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
TRBV9-201ENST00000390363 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
TRBV9-201ENST00000390363 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
TRBV9-201ENST00000390363 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
TRBV9-201ENST00000390363 ABCC8Q09428 1581 aa12.76□□□□□ -0.37
TRBV9-201ENST00000390363 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
TRBV9-201ENST00000390363 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
TRBV9-201ENST00000390363 AEBP2Q6ZN18 517 aaPredicted RBP12.68□□□□□ -0.38
TRBV9-201ENST00000390363 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
TRBV9-201ENST00000390363 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
TRBV9-201ENST00000390363 WRNQ14191 1432 aaPredicted RBP eCLIP12.63□□□□□ -0.39
TRBV9-201ENST00000390363 TARBP1Q13395 1621 aaKnown RBP12.59□□□□□ -0.39
TRBV9-201ENST00000390363 RIMBP3CA6NJZ7 1639 aa12.59□□□□□ -0.39
TRBV9-201ENST00000390363 RIMBP3BA6NNM3 1639 aa12.59□□□□□ -0.39
TRBV9-201ENST00000390363 RIMBP3Q9UFD9 1639 aa12.59□□□□□ -0.39
TRBV9-201ENST00000390363 SOGA1O94964 1423 aa12.58□□□□□ -0.4
TRBV9-201ENST00000390363 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRBV9-201ENST00000390363 CUX1P39880 1505 aa12.57□□□□□ -0.4
TRBV9-201ENST00000390363 ARHGEF11O15085 1522 aa12.57□□□□□ -0.4
TRBV9-201ENST00000390363 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
TRBV9-201ENST00000390363 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
TRBV9-201ENST00000390363 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
TRBV9-201ENST00000390363 TOP2BQ02880 1626 aa12.52□□□□□ -0.4
TRBV9-201ENST00000390363 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
TRBV9-201ENST00000390363 BIVM-ERCC5R4GMW8 1640 aa12.49□□□□□ -0.41
TRBV9-201ENST00000390363 SYNJ1O43426 1573 aa12.49□□□□□ -0.41
TRBV9-201ENST00000390363 TDRD9Q8NDG6 1382 aaKnown RBP12.48□□□□□ -0.41
TRBV9-201ENST00000390363 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
TRBV9-201ENST00000390363 ARAP1Q96P48 1450 aa12.46□□□□□ -0.41
TRBV9-201ENST00000390363 ABCA10Q8WWZ4 1543 aa12.44□□□□□ -0.42
TRBV9-201ENST00000390363 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
TRBV9-201ENST00000390363 CHD1O14646 1710 aa12.43□□□□□ -0.42
TRBV9-201ENST00000390363 FBLN2P98095 1184 aa12.42□□□□□ -0.42
TRBV9-201ENST00000390363 GAPVD1Q14C86 1478 aa12.41□□□□□ -0.42
TRBV9-201ENST00000390363 CLASP1Q7Z460 1538 aa12.41□□□□□ -0.42
TRBV9-201ENST00000390363 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
TRBV9-201ENST00000390363 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
TRBV9-201ENST00000390363 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.43
TRBV9-201ENST00000390363 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
TRBV9-201ENST00000390363 CHIC1Q5VXU3 224 aa12.38□□□□□ -0.43
TRBV9-201ENST00000390363 MAGI1Q96QZ7 1491 aaPredicted RBP12.37□□□□□ -0.43
TRBV9-201ENST00000390363 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
TRBV9-201ENST00000390363 ABCA5Q8WWZ7 1642 aa12.32□□□□□ -0.44
TRBV9-201ENST00000390363 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
TRBV9-201ENST00000390363 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
TRBV9-201ENST00000390363 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
TRBV9-201ENST00000390363 IGF1RP08069 1367 aa12.28□□□□□ -0.44
TRBV9-201ENST00000390363 EEA1Q15075 1411 aa12.28□□□□□ -0.44
TRBV9-201ENST00000390363 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
TRBV9-201ENST00000390363 FAM9AQ8IZU1 332 aaPredicted RBP12.25□□□□□ -0.45
TRBV9-201ENST00000390363 CSRNP3Q8WYN3 585 aa12.25□□□□□ -0.45
TRBV9-201ENST00000390363 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
TRBV9-201ENST00000390363 NUP160Q12769 1436 aa12.23□□□□□ -0.45
TRBV9-201ENST00000390363 CUL7Q14999 1698 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms