RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 NISCHQ9Y2I1 1504 aa30.26■■■□□ 2.43
SOD1-202ENST00000389995 ABCC9O60706 1549 aa27.82■■■□□ 2.04
SOD1-202ENST00000389995 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
SOD1-202ENST00000389995 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.83
SOD1-202ENST00000389995 RB1CC1Q8TDY2 1594 aa26.21■■□□□ 1.79
SOD1-202ENST00000389995 NACADO15069 1562 aa25.9■■□□□ 1.74
SOD1-202ENST00000389995 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
SOD1-202ENST00000389995 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
SOD1-202ENST00000389995 DCAF8L2P0C7V8 631 aa25.82■■□□□ 1.72
SOD1-202ENST00000389995 BICRAQ9NZM4 1560 aa25.54■■□□□ 1.68
SOD1-202ENST00000389995 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
SOD1-202ENST00000389995 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
SOD1-202ENST00000389995 CECR2Q9BXF3 1484 aa25.05■■□□□ 1.6
SOD1-202ENST00000389995 SCRIBQ14160 1630 aa24.99■■□□□ 1.59
SOD1-202ENST00000389995 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
SOD1-202ENST00000389995 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
SOD1-202ENST00000389995 EIF4G1Q04637 1599 aaKnown RBP24.92■■□□□ 1.58
SOD1-202ENST00000389995 DCAF1Q9Y4B6 1507 aa24.87■■□□□ 1.57
SOD1-202ENST00000389995 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
SOD1-202ENST00000389995 CUX2O14529 1486 aa24.03■■□□□ 1.44
SOD1-202ENST00000389995 ERCC6Q03468 1493 aa24■■□□□ 1.43
SOD1-202ENST00000389995 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
SOD1-202ENST00000389995 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
SOD1-202ENST00000389995 NESP48681 1621 aa23.81■■□□□ 1.4
SOD1-202ENST00000389995 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
SOD1-202ENST00000389995 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
SOD1-202ENST00000389995 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
SOD1-202ENST00000389995 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
SOD1-202ENST00000389995 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
SOD1-202ENST00000389995 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
SOD1-202ENST00000389995 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
SOD1-202ENST00000389995 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
SOD1-202ENST00000389995 PEG3Q9GZU2 1588 aa23.43■■□□□ 1.34
SOD1-202ENST00000389995 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
SOD1-202ENST00000389995 MROH2BQ7Z745 1585 aa23.37■■□□□ 1.33
SOD1-202ENST00000389995 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
SOD1-202ENST00000389995 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
SOD1-202ENST00000389995 CADPSQ9ULU8 1353 aa23.16■■□□□ 1.3
SOD1-202ENST00000389995 WDR62O43379 1518 aa23.14■■□□□ 1.3
SOD1-202ENST00000389995 WIZO95785 1651 aa23.13■■□□□ 1.29
SOD1-202ENST00000389995 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
SOD1-202ENST00000389995 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
SOD1-202ENST00000389995 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
SOD1-202ENST00000389995 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
SOD1-202ENST00000389995 CFTRP13569 1480 aa22.81■■□□□ 1.24
SOD1-202ENST00000389995 RIMBP3CA6NJZ7 1639 aa22.75■■□□□ 1.23
SOD1-202ENST00000389995 RIMBP3BA6NNM3 1639 aa22.75■■□□□ 1.23
SOD1-202ENST00000389995 RIMBP3Q9UFD9 1639 aa22.75■■□□□ 1.23
SOD1-202ENST00000389995 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
SOD1-202ENST00000389995 TOP2AP11388 1531 aaKnown RBP22.69■■□□□ 1.22
SOD1-202ENST00000389995 RSF1Q96T23 1441 aaPredicted RBP22.67■■□□□ 1.22
SOD1-202ENST00000389995 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.21
SOD1-202ENST00000389995 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
SOD1-202ENST00000389995 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
SOD1-202ENST00000389995 CHD1O14646 1710 aa22.49■■□□□ 1.19
SOD1-202ENST00000389995 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
SOD1-202ENST00000389995 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
SOD1-202ENST00000389995 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
SOD1-202ENST00000389995 CYB5RLQ6IPT4 315 aa22.46■■□□□ 1.19
SOD1-202ENST00000389995 AEBP2Q6ZN18 517 aaPredicted RBP22.42■■□□□ 1.18
SOD1-202ENST00000389995 AQRO60306 1485 aaKnown RBP eCLIP22.36■■□□□ 1.177e-7■■■■■ 35.6
SOD1-202ENST00000389995 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
SOD1-202ENST00000389995 TRHP20396 242 aaPredicted RBP22.35■■□□□ 1.17
SOD1-202ENST00000389995 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
SOD1-202ENST00000389995 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
SOD1-202ENST00000389995 FBLN2P98095 1184 aa22.31■■□□□ 1.16
SOD1-202ENST00000389995 ABCC8Q09428 1581 aa22.3■■□□□ 1.16
SOD1-202ENST00000389995 POLA1P09884 1462 aaPredicted RBP22.22■■□□□ 1.15
SOD1-202ENST00000389995 RAD54L2Q9Y4B4 1467 aa22.21■■□□□ 1.15
SOD1-202ENST00000389995 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
SOD1-202ENST00000389995 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
SOD1-202ENST00000389995 SOGA1O94964 1423 aa22.1■■□□□ 1.13
SOD1-202ENST00000389995 CLASP1Q7Z460 1538 aa22.1■■□□□ 1.13
SOD1-202ENST00000389995 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
SOD1-202ENST00000389995 SYNJ1O43426 1573 aa22.02■■□□□ 1.12
SOD1-202ENST00000389995 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
SOD1-202ENST00000389995 CUX1P39880 1505 aa21.97■■□□□ 1.11
SOD1-202ENST00000389995 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
SOD1-202ENST00000389995 PBRM1Q86U86 1689 aa21.96■■□□□ 1.11
SOD1-202ENST00000389995 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
SOD1-202ENST00000389995 GRIN2BQ13224 1484 aa21.93■■□□□ 1.1
SOD1-202ENST00000389995 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
SOD1-202ENST00000389995 GAPVD1Q14C86 1478 aa21.88■■□□□ 1.09
SOD1-202ENST00000389995 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
SOD1-202ENST00000389995 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
SOD1-202ENST00000389995 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
SOD1-202ENST00000389995 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
SOD1-202ENST00000389995 GRIN2AQ12879 1464 aa21.67■■□□□ 1.06
SOD1-202ENST00000389995 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
SOD1-202ENST00000389995 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
SOD1-202ENST00000389995 SHROOM2Q13796 1616 aa21.6■■□□□ 1.05
SOD1-202ENST00000389995 NUP160Q12769 1436 aa21.58■■□□□ 1.05
SOD1-202ENST00000389995 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
SOD1-202ENST00000389995 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
SOD1-202ENST00000389995 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
SOD1-202ENST00000389995 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
SOD1-202ENST00000389995 PRG4Q92954 1404 aaPredicted RBP21.46■■□□□ 1.03
SOD1-202ENST00000389995 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
SOD1-202ENST00000389995 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
SOD1-202ENST00000389995 TSPOAP1O95153 1857 aa21.39■■□□□ 1.01
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