RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 POTEDQ86YR6 584 aa4.06□□□□□ -1.76
RNU6-1340P-201ENST00000384438 POTEHQ6S545 545 aa2.92□□□□□ -1.94
RNU6-1340P-201ENST00000384438 PLSCR2Q9NRY7 297 aa2.83□□□□□ -1.96
RNU6-1340P-201ENST00000384438 CACNB1Q02641 598 aaPredicted RBP2.44□□□□□ -2.02
RNU6-1340P-201ENST00000384438 FOXD1Q16676 465 aa2.19□□□□□ -2.06
RNU6-1340P-201ENST00000384438 SP7Q8TDD2 431 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1340P-201ENST00000384438 MSH5O43196 834 aa2.04□□□□□ -2.08
RNU6-1340P-201ENST00000384438 LHX8Q68G74 356 aa2.01□□□□□ -2.09
RNU6-1340P-201ENST00000384438 PCDH10Q9P2E7 1040 aa2.01□□□□□ -2.09
RNU6-1340P-201ENST00000384438 LOC100996750A0A140TA64 210 aa2□□□□□ -2.09
RNU6-1340P-201ENST00000384438 KRTAP4-6Q9BYQ5 205 aa2□□□□□ -2.09
RNU6-1340P-201ENST00000384438 KRTAP17-1Q9BYP8 105 aa1.99□□□□□ -2.09
RNU6-1340P-201ENST00000384438 POTEMA6NI47 508 aa1.96□□□□□ -2.1
RNU6-1340P-201ENST00000384438 POTEGQ6S5H5 508 aa1.9□□□□□ -2.11
RNU6-1340P-201ENST00000384438 XP32Q5T750 250 aa1.87□□□□□ -2.11
RNU6-1340P-201ENST00000384438 AEBP2Q6ZN18 517 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1340P-201ENST00000384438 KRTAP9-8Q9BYQ0 159 aa1.81□□□□□ -2.12
RNU6-1340P-201ENST00000384438 KRTAP5-3Q6L8H2 238 aa1.76□□□□□ -2.13
RNU6-1340P-201ENST00000384438 RNF39Q9H2S5 420 aa1.69□□□□□ -2.14
RNU6-1340P-201ENST00000384438 SENP3Q9H4L4 574 aaPredicted RBP1.68□□□□□ -2.14
RNU6-1340P-201ENST00000384438 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.65□□□□□ -2.15
RNU6-1340P-201ENST00000384438 MMRN1Q13201 1228 aa1.65□□□□□ -2.15
RNU6-1340P-201ENST00000384438 KRTAP1-3Q8IUG1 177 aa1.63□□□□□ -2.15
RNU6-1340P-201ENST00000384438 KRTAP9-2Q9BYQ4 174 aa1.61□□□□□ -2.15
RNU6-1340P-201ENST00000384438 KRTAP9-6A0A140TA67 174 aa1.6□□□□□ -2.15
RNU6-1340P-201ENST00000384438 KRTAP4-8Q9BYQ9 185 aa1.6□□□□□ -2.15
RNU6-1340P-201ENST00000384438 KRTAP4-8A0A0G2JLE6 195 aa1.58□□□□□ -2.16
RNU6-1340P-201ENST00000384438 CHIC1Q5VXU3 224 aa1.58□□□□□ -2.16
RNU6-1340P-201ENST00000384438 C1QBPQ07021 282 aaKnown RBP1.57□□□□□ -2.16
RNU6-1340P-201ENST00000384438 LCE2DQ5TA82 110 aaPredicted RBP1.57□□□□□ -2.16
RNU6-1340P-201ENST00000384438 KRTAP4-7Q9BYR0 210 aa1.57□□□□□ -2.16
RNU6-1340P-201ENST00000384438 KRTAP4-5Q9BYR2 181 aa1.57□□□□□ -2.16
RNU6-1340P-201ENST00000384438 CHRDL2Q6WN34 429 aa1.56□□□□□ -2.16
RNU6-1340P-201ENST00000384438 CDAN1Q8IWY9 1227 aa1.56□□□□□ -2.16
RNU6-1340P-201ENST00000384438 KRTAP4-2Q9BYR5 136 aa1.54□□□□□ -2.16
RNU6-1340P-201ENST00000384438 EVX2Q03828 476 aa1.53□□□□□ -2.16
RNU6-1340P-201ENST00000384438 SPNS2Q8IVW8 549 aa1.53□□□□□ -2.16
RNU6-1340P-201ENST00000384438 OTUD5Q96G74 571 aa1.53□□□□□ -2.16
RNU6-1340P-201ENST00000384438 KRTAP9-9Q9BYP9 154 aa1.53□□□□□ -2.16
RNU6-1340P-201ENST00000384438 KRTAP9-4Q9BYQ2 154 aa1.53□□□□□ -2.16
RNU6-1340P-201ENST00000384438 PHF23Q9BUL5 403 aaPredicted RBP1.52□□□□□ -2.17
RNU6-1340P-201ENST00000384438 HAX1O00165 279 aa1.51□□□□□ -2.17
RNU6-1340P-201ENST00000384438 LCE3BQ5TA77 95 aa1.43□□□□□ -2.18
RNU6-1340P-201ENST00000384438 SUZ12Q15022 739 aaKnown RBP1.4□□□□□ -2.19
RNU6-1340P-201ENST00000384438 KRTAP4-9Q9BYQ8 210 aa1.4□□□□□ -2.19
RNU6-1340P-201ENST00000384438 POTEIP0CG38 1075 aa1.39□□□□□ -2.19
RNU6-1340P-201ENST00000384438 GABBR2O75899 941 aa1.37□□□□□ -2.19
RNU6-1340P-201ENST00000384438 LCE1DQ5T752 114 aa1.36□□□□□ -2.19
RNU6-1340P-201ENST00000384438 BTBD11A6QL63 1104 aa1.34□□□□□ -2.19
RNU6-1340P-201ENST00000384438 PSMG3-AS1Q96PY0 264 aa1.34□□□□□ -2.19
RNU6-1340P-201ENST00000384438 FAM163AQ96GL9 167 aaPredicted RBP1.33□□□□□ -2.2
RNU6-1340P-201ENST00000384438 POTEB2H3BUK9 544 aa1.32□□□□□ -2.2
RNU6-1340P-201ENST00000384438 KRTAP4-12Q9BQ66 201 aa1.32□□□□□ -2.2
RNU6-1340P-201ENST00000384438 PIP4P2Q8N4L2 257 aa1.29□□□□□ -2.2
RNU6-1340P-201ENST00000384438 PIAS4Q8N2W9 510 aaPredicted RBP1.27□□□□□ -2.21
RNU6-1340P-201ENST00000384438 KRTAP4-11Q9BYQ6 195 aa1.27□□□□□ -2.21
RNU6-1340P-201ENST00000384438 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1340P-201ENST00000384438 KRTAP5-9P26371 169 aa1.18□□□□□ -2.22
RNU6-1340P-201ENST00000384438 DMRT2Q9Y5R5 561 aa1.18□□□□□ -2.22
RNU6-1340P-201ENST00000384438 DSG3P32926 999 aa1.17□□□□□ -2.22
RNU6-1340P-201ENST00000384438 KRTAP1-1Q07627 177 aa1.15□□□□□ -2.23
RNU6-1340P-201ENST00000384438 C19orf67A6NJJ6 358 aa1.12□□□□□ -2.23
RNU6-1340P-201ENST00000384438 KRTAP19-1Q8IUB9 90 aa1.12□□□□□ -2.23
RNU6-1340P-201ENST00000384438 POTEJP0CG39 1038 aa1.11□□□□□ -2.23
RNU6-1340P-201ENST00000384438 RGS19P49795 217 aa1.11□□□□□ -2.23
RNU6-1340P-201ENST00000384438 FXR2P51116 673 aaKnown RBP eCLIP1.11□□□□□ -2.23
RNU6-1340P-201ENST00000384438 IRX2Q9BZI1 471 aaPredicted RBP1.1□□□□□ -2.23
RNU6-1340P-201ENST00000384438 ANO8Q9HCE9 1232 aaPredicted RBP1.09□□□□□ -2.23
RNU6-1340P-201ENST00000384438 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.24
RNU6-1340P-201ENST00000384438 LAMC2Q13753 1193 aa1.08□□□□□ -2.24
RNU6-1340P-201ENST00000384438 ZNF775Q96BV0 537 aaPredicted RBP1.08□□□□□ -2.24
RNU6-1340P-201ENST00000384438 RBM42Q9BTD8 480 aaKnown RBP1.07□□□□□ -2.24
RNU6-1340P-201ENST00000384438 KRTAP3-3Q9BYR6 98 aa1.06□□□□□ -2.24
RNU6-1340P-201ENST00000384438 KRTAP3-2Q9BYR7 98 aa1.06□□□□□ -2.24
RNU6-1340P-201ENST00000384438 KRTAP5-4Q6L8H1 288 aa1.05□□□□□ -2.24
RNU6-1340P-201ENST00000384438 STK17AQ9UEE5 414 aa1.05□□□□□ -2.24
RNU6-1340P-201ENST00000384438 DCAF8L1A6NGE4 600 aa1.04□□□□□ -2.24
RNU6-1340P-201ENST00000384438 LCE2BO14633 110 aa1.04□□□□□ -2.24
RNU6-1340P-201ENST00000384438 ARID1BQ8NFD5 2236 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1340P-201ENST00000384438 ST18O60284 1047 aa1.03□□□□□ -2.24
RNU6-1340P-201ENST00000384438 LORP23490 312 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1340P-201ENST00000384438 LSRQ86X29 649 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1340P-201ENST00000384438 RNF166Q96A37 237 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1340P-201ENST00000384438 MAMSTRQ6ZN01 415 aa1.02□□□□□ -2.25
RNU6-1340P-201ENST00000384438 KRTAP5-2Q701N4 177 aa1.01□□□□□ -2.25
RNU6-1340P-201ENST00000384438 LCE2AQ5TA79 106 aaPredicted RBP1□□□□□ -2.25
RNU6-1340P-201ENST00000384438 DCBLD2Q96PD2 775 aa1□□□□□ -2.25
RNU6-1340P-201ENST00000384438 KRTAP4-4Q9BYR3 166 aa1□□□□□ -2.25
RNU6-1340P-201ENST00000384438 Q6ZNB5 142 aa0.98□□□□□ -2.25
RNU6-1340P-201ENST00000384438 KRTAP5-1Q6L8H4 278 aa0.97□□□□□ -2.25
RNU6-1340P-201ENST00000384438 PLA2G2EQ9NZK7 142 aa0.97□□□□□ -2.25
RNU6-1340P-201ENST00000384438 RGS20O76081 388 aa0.96□□□□□ -2.26
RNU6-1340P-201ENST00000384438 MAPK8IP2Q13387 824 aaPredicted RBP0.96□□□□□ -2.26
RNU6-1340P-201ENST00000384438 DNAJC5BQ9UF47 199 aa0.94□□□□□ -2.26
RNU6-1340P-201ENST00000384438 CLCN6P51797 869 aa0.93□□□□□ -2.26
RNU6-1340P-201ENST00000384438 KRTAP5-8O75690 187 aa0.92□□□□□ -2.26
RNU6-1340P-201ENST00000384438 GOLGA2P5Q9HBQ8 144 aa0.92□□□□□ -2.26
RNU6-1340P-201ENST00000384438 SCUBE2Q9NQ36 999 aa0.92□□□□□ -2.26
RNU6-1340P-201ENST00000384438 ZNF787Q6DD87 383 aa0.9□□□□□ -2.27
RNU6-1340P-201ENST00000384438 TRAF7Q6Q0C0 670 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms