RNA–Protein interactions for RNA: ENST00000382034.9

TOM1-201, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5 BASIC

Gene TOM1, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-201ENST00000382034 NISCHQ9Y2I1 1504 aa38.84■■■■□ 3.81
TOM1-201ENST00000382034 CCDC180Q9P1Z9 1646 aa34.69■■■■□ 3.14
TOM1-201ENST00000382034 ABCC9O60706 1549 aa33.91■■■■□ 3.02
TOM1-201ENST00000382034 RB1CC1Q8TDY2 1594 aa32.69■■■□□ 2.82
TOM1-201ENST00000382034 NACADO15069 1562 aa32.65■■■□□ 2.82
TOM1-201ENST00000382034 MYO15BQ96JP2 1530 aa32.49■■■□□ 2.79
TOM1-201ENST00000382034 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
TOM1-201ENST00000382034 ZCCHC6Q5VYS8 1495 aaKnown RBP32.31■■■□□ 2.76
TOM1-201ENST00000382034 DCAF1Q9Y4B6 1507 aa32.25■■■□□ 2.75
TOM1-201ENST00000382034 UNC13AQ9UPW8 1703 aa31.88■■■□□ 2.69
TOM1-201ENST00000382034 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
TOM1-201ENST00000382034 PABPN1Q86U42 306 aaKnown RBP eCLIP31.61■■■□□ 2.65
TOM1-201ENST00000382034 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
TOM1-201ENST00000382034 SCRIBQ14160 1630 aa31.45■■■□□ 2.63
TOM1-201ENST00000382034 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
TOM1-201ENST00000382034 EIF4G1Q04637 1599 aaKnown RBP30.85■■■□□ 2.53
TOM1-201ENST00000382034 CC2D2AQ9P2K1 1620 aa30.74■■■□□ 2.51
TOM1-201ENST00000382034 CECR2Q9BXF3 1484 aa30.56■■■□□ 2.48
TOM1-201ENST00000382034 SMARCA4P51532 1647 aa30.16■■■□□ 2.42
TOM1-201ENST00000382034 BAZ1AQ9NRL2 1556 aaPredicted RBP30.15■■■□□ 2.42
TOM1-201ENST00000382034 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
TOM1-201ENST00000382034 SMARCA2P51531 1590 aa30.06■■■□□ 2.4
TOM1-201ENST00000382034 ATAD2BQ9ULI0 1458 aa30.04■■■□□ 2.4
TOM1-201ENST00000382034 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
TOM1-201ENST00000382034 HMGXB3Q12766 1538 aa29.95■■■□□ 2.39
TOM1-201ENST00000382034 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
TOM1-201ENST00000382034 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
TOM1-201ENST00000382034 WIZO95785 1651 aa29.52■■■□□ 2.32
TOM1-201ENST00000382034 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
TOM1-201ENST00000382034 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
TOM1-201ENST00000382034 ERCC6Q03468 1493 aa29.3■■■□□ 2.28
TOM1-201ENST00000382034 NESP48681 1621 aa29.28■■■□□ 2.28
TOM1-201ENST00000382034 TOP2AP11388 1531 aaKnown RBP29.27■■■□□ 2.28
TOM1-201ENST00000382034 CADPSQ9ULU8 1353 aa29.2■■■□□ 2.26
TOM1-201ENST00000382034 CUX2O14529 1486 aa29.15■■■□□ 2.26
TOM1-201ENST00000382034 PDS5BQ9NTI5 1447 aa29.14■■■□□ 2.26
TOM1-201ENST00000382034 CFTRP13569 1480 aa29■■■□□ 2.23
TOM1-201ENST00000382034 KIF21AQ7Z4S6 1674 aa28.98■■■□□ 2.23
TOM1-201ENST00000382034 THOC2Q8NI27 1593 aaKnown RBP28.96■■■□□ 2.23
TOM1-201ENST00000382034 CCDC88BA6NC98 1476 aa28.89■■■□□ 2.22
TOM1-201ENST00000382034 FANCD2Q9BXW9 1451 aa28.81■■■□□ 2.2
TOM1-201ENST00000382034 MRC2Q9UBG0 1479 aa28.81■■■□□ 2.2
TOM1-201ENST00000382034 CEP164Q9UPV0 1460 aa28.81■■■□□ 2.2
TOM1-201ENST00000382034 PRDM2Q13029 1718 aa28.78■■■□□ 2.2
TOM1-201ENST00000382034 WDR62O43379 1518 aa28.75■■■□□ 2.19
TOM1-201ENST00000382034 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
TOM1-201ENST00000382034 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
TOM1-201ENST00000382034 ABCC8Q09428 1581 aa28.45■■■□□ 2.14
TOM1-201ENST00000382034 DNAJC5Q9H3Z4 198 aa28.41■■■□□ 2.14
TOM1-201ENST00000382034 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
TOM1-201ENST00000382034 DNMBPQ6XZF7 1577 aa28.32■■■□□ 2.12
TOM1-201ENST00000382034 IFT140Q96RY7 1462 aa28.25■■■□□ 2.11
TOM1-201ENST00000382034 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
TOM1-201ENST00000382034 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
TOM1-201ENST00000382034 CUX1P39880 1505 aa28.03■■■□□ 2.08
TOM1-201ENST00000382034 ZNF608Q9ULD9 1512 aaPredicted RBP28.03■■■□□ 2.08
TOM1-201ENST00000382034 SOGA1O94964 1423 aa27.97■■■□□ 2.07
TOM1-201ENST00000382034 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
TOM1-201ENST00000382034 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
TOM1-201ENST00000382034 EIF4G3O43432 1585 aaKnown RBP27.96■■■□□ 2.07
TOM1-201ENST00000382034 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.06
TOM1-201ENST00000382034 OSCARQ8IYS5 282 aa27.88■■■□□ 2.05
TOM1-201ENST00000382034 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.053e-6■■■□□ 15.4
TOM1-201ENST00000382034 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
TOM1-201ENST00000382034 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
TOM1-201ENST00000382034 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
TOM1-201ENST00000382034 TDRD9Q8NDG6 1382 aaKnown RBP27.78■■■□□ 2.04
TOM1-201ENST00000382034 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.04
TOM1-201ENST00000382034 SYNJ1O43426 1573 aa27.72■■■□□ 2.03
TOM1-201ENST00000382034 GRIN2BQ13224 1484 aa27.7■■■□□ 2.02
TOM1-201ENST00000382034 MAGI1Q96QZ7 1491 aaPredicted RBP27.67■■■□□ 2.02
TOM1-201ENST00000382034 GAPVD1Q14C86 1478 aa27.66■■■□□ 2.02
TOM1-201ENST00000382034 ABCA5Q8WWZ7 1642 aa27.64■■■□□ 2.02
TOM1-201ENST00000382034 CHD1O14646 1710 aa27.62■■■□□ 2.01
TOM1-201ENST00000382034 SNAPC4Q5SXM2 1469 aa27.61■■■□□ 2.01
TOM1-201ENST00000382034 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
TOM1-201ENST00000382034 SYNJ2O15056 1496 aa27.54■■■□□ 2
TOM1-201ENST00000382034 FBLN2P98095 1184 aa27.52■■■□□ 2
TOM1-201ENST00000382034 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
TOM1-201ENST00000382034 ERICH3Q5RHP9 1530 aa27.45■■□□□ 1.98
TOM1-201ENST00000382034 RIMBP3CA6NJZ7 1639 aa27.38■■□□□ 1.97
TOM1-201ENST00000382034 RIMBP3BA6NNM3 1639 aa27.38■■□□□ 1.97
TOM1-201ENST00000382034 RIMBP3Q9UFD9 1639 aa27.38■■□□□ 1.97
TOM1-201ENST00000382034 ARHGEF11O15085 1522 aa27.38■■□□□ 1.97
TOM1-201ENST00000382034 CLASP1Q7Z460 1538 aa27.37■■□□□ 1.97
TOM1-201ENST00000382034 ADAMTS12P58397 1594 aa27.37■■□□□ 1.97
TOM1-201ENST00000382034 FHAD1B1AJZ9 1412 aa27.35■■□□□ 1.97
TOM1-201ENST00000382034 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
TOM1-201ENST00000382034 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
TOM1-201ENST00000382034 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
TOM1-201ENST00000382034 NUP160Q12769 1436 aa27.23■■□□□ 1.95
TOM1-201ENST00000382034 IGF1RP08069 1367 aa27.17■■□□□ 1.94
TOM1-201ENST00000382034 CUL7Q14999 1698 aa27.16■■□□□ 1.94
TOM1-201ENST00000382034 CEP170Q5SW79 1584 aa27.15■■□□□ 1.94
TOM1-201ENST00000382034 ARAP1Q96P48 1450 aa27.12■■□□□ 1.93
TOM1-201ENST00000382034 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
TOM1-201ENST00000382034 SHROOM2Q13796 1616 aa27.06■■□□□ 1.92
TOM1-201ENST00000382034 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
TOM1-201ENST00000382034 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
TOM1-201ENST00000382034 KIAA0586Q9BVV6 1533 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms